RNA–Protein interactions for RNA: ENST00000497726.5

CCDC58-206, Transcript of coiled-coil domain containing 58, humanhuman

TSL 5 BASIC

Gene CCDC58, Length 438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-206ENST00000497726 PDE6BP35913 854 aa13□□□□□ -0.33
CCDC58-206ENST00000497726 NOGQ13253 232 aa13□□□□□ -0.33
CCDC58-206ENST00000497726 GPC2Q8N158 579 aa13□□□□□ -0.33
CCDC58-206ENST00000497726 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
CCDC58-206ENST00000497726 NARFQ9UHQ1 456 aa13□□□□□ -0.33
CCDC58-206ENST00000497726 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
CCDC58-206ENST00000497726 COL11A2P13942 1736 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-206ENST00000497726 FZD9O00144 591 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 KCNQ3O43525 872 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 NEFMP07197 916 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
CCDC58-206ENST00000497726 SYNE4Q8N205 404 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 BRIP1Q9BX63 1249 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 ZNF408Q9H9D4 720 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 RNF186Q9NXI6 227 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 ZBTB1Q9Y2K1 713 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 ANKRD31Q8N7Z5 1873 aa12.99□□□□□ -0.33
CCDC58-206ENST00000497726 SOS1Q07889 1333 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-206ENST00000497726 PITPNM2Q9BZ72 1349 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
CCDC58-206ENST00000497726 RALBP1Q15311 655 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 SOGA3Q5TF21 947 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 OLFM4Q6UX06 510 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 PIP4P2Q8N4L2 257 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 CNKSR1Q969H4 720 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 ZNF496Q96IT1 587 aaPredicted RBP12.98□□□□□ -0.33
CCDC58-206ENST00000497726 SAGE1Q9NXZ1 904 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 TRIOBPQ9H2D6 2365 aa12.98□□□□□ -0.33
CCDC58-206ENST00000497726 COL15A1P39059 1388 aa12.97□□□□□ -0.33
CCDC58-206ENST00000497726 MYBBP1AQ9BQG0 1328 aaKnown RBP12.97□□□□□ -0.33
CCDC58-206ENST00000497726 MAPK8IP3Q9UPT6 1336 aa12.97□□□□□ -0.33
CCDC58-206ENST00000497726 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
CCDC58-206ENST00000497726 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
CCDC58-206ENST00000497726 C7orf43Q8WVR3 580 aa12.97□□□□□ -0.33
CCDC58-206ENST00000497726 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
CCDC58-206ENST00000497726 GLIS2Q9BZE0 524 aaPredicted RBP12.97□□□□□ -0.33
CCDC58-206ENST00000497726 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
CCDC58-206ENST00000497726 CYP19A1P11511 503 aaPredicted RBP12.96□□□□□ -0.33
CCDC58-206ENST00000497726 SCNN1DP51172 638 aa12.96□□□□□ -0.33
CCDC58-206ENST00000497726 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
CCDC58-206ENST00000497726 PRR5LQ6MZQ0 368 aa12.96□□□□□ -0.33
CCDC58-206ENST00000497726 ZNF790Q6PG37 636 aa12.96□□□□□ -0.33
CCDC58-206ENST00000497726 PDZRN3Q9UPQ7 1066 aa12.96□□□□□ -0.33
CCDC58-206ENST00000497726 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 HEG1Q9ULI3 1381 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 ZEB1P37275 1124 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-206ENST00000497726 PIP4K2AP48426 406 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-206ENST00000497726 KIF23Q02241 960 aaPredicted RBP12.95□□□□□ -0.34
CCDC58-206ENST00000497726 CCDC93Q567U6 631 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 STYK1Q6J9G0 422 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 CCDC146Q8IYE0 955 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 SCN7AQ01118 1682 aa12.95□□□□□ -0.34
CCDC58-206ENST00000497726 LAMB4A4D0S4 1761 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 KDM3BQ7LBC6 1761 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 PRAMEF22A3QJZ6 481 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 FAM155AB1AL88 458 aaPredicted RBP12.94□□□□□ -0.34
CCDC58-206ENST00000497726 SRGNP10124 158 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
CCDC58-206ENST00000497726 TBC1D9BQ66K14 1250 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 USP50Q70EL3 339 aaPredicted RBP12.94□□□□□ -0.34
CCDC58-206ENST00000497726 FMNL2Q96PY5 1086 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 MIS18AQ9NYP9 233 aa12.94□□□□□ -0.34
CCDC58-206ENST00000497726 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
CCDC58-206ENST00000497726 HUNKP57058 714 aa12.93□□□□□ -0.34
CCDC58-206ENST00000497726 PKN2Q16513 984 aaKnown RBP12.93□□□□□ -0.34
CCDC58-206ENST00000497726 PLEKHF1Q96S99 279 aa12.93□□□□□ -0.34
CCDC58-206ENST00000497726 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
CCDC58-206ENST00000497726 STARD3NLO95772 234 aa12.92□□□□□ -0.34
CCDC58-206ENST00000497726 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
CCDC58-206ENST00000497726 NFE2L2Q16236 605 aa12.92□□□□□ -0.34
CCDC58-206ENST00000497726 MASTLQ96GX5 879 aa12.92□□□□□ -0.34
CCDC58-206ENST00000497726 BCORQ6W2J9 1755 aa12.92□□□□□ -0.34
CCDC58-206ENST00000497726 HAX1O00165 279 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 A1BGP04217 495 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 NEUROD2Q15784 382 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 VSIG10Q8N0Z9 540 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 HDAC9Q9UKV0 1011 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 BRCA2P51587 3418 aa12.91□□□□□ -0.34
CCDC58-206ENST00000497726 MNX1P50219 401 aaPredicted RBP12.9□□□□□ -0.34
CCDC58-206ENST00000497726 EIF6P56537 245 aaKnown RBP12.9□□□□□ -0.34
CCDC58-206ENST00000497726 JDP2Q8WYK2 163 aa12.9□□□□□ -0.34
CCDC58-206ENST00000497726 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
CCDC58-206ENST00000497726 TBC1D2BQ9UPU7 963 aa12.9□□□□□ -0.34
CCDC58-206ENST00000497726 RANBP2P49792 3224 aaKnown RBP12.9□□□□□ -0.34
CCDC58-206ENST00000497726 RGMBQ6NW40 437 aa12.89□□□□□ -0.35
CCDC58-206ENST00000497726 NPM2Q86SE8 214 aaKnown RBP12.89□□□□□ -0.35
CCDC58-206ENST00000497726 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
CCDC58-206ENST00000497726 PNNQ9H307 717 aaKnown RBP12.89□□□□□ -0.35
CCDC58-206ENST00000497726 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
CCDC58-206ENST00000497726 COL4A5P29400 1685 aa12.89□□□□□ -0.35
CCDC58-206ENST00000497726 CENPFP49454 3210 aa12.88□□□□□ -0.35
CCDC58-206ENST00000497726 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CCDC58-206ENST00000497726 RIPK4P57078 832 aa12.88□□□□□ -0.35
CCDC58-206ENST00000497726 TAF7Q15545 349 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-206ENST00000497726 RTKN2Q8IZC4 609 aa12.88□□□□□ -0.35
CCDC58-206ENST00000497726 ZNF296Q8WUU4 475 aaPredicted RBP12.88□□□□□ -0.35
CCDC58-206ENST00000497726 ARFGEF2Q9Y6D5 1785 aa12.87□□□□□ -0.35
CCDC58-206ENST00000497726 NPHP1O15259 732 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms