RNA–Protein interactions for RNA: ENST00000497703.1

GARNL3-221, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-221ENST00000497703 TYRO3Q06418 890 aa12.02□□□□□ -0.49
GARNL3-221ENST00000497703 CMTR1Q8N1G2 835 aaKnown RBP12.02□□□□□ -0.49
GARNL3-221ENST00000497703 ZCCHC2Q9C0B9 1178 aaKnown RBP12.02□□□□□ -0.49
GARNL3-221ENST00000497703 BCL11AQ9H165 835 aa12.02□□□□□ -0.49
GARNL3-221ENST00000497703 DMGDHQ9UI17 866 aaKnown RBP12.02□□□□□ -0.49
GARNL3-221ENST00000497703 AMOTL2Q9Y2J4 779 aa12.02□□□□□ -0.49
GARNL3-221ENST00000497703 TMC7Q7Z402 723 aa12.01□□□□□ -0.49
GARNL3-221ENST00000497703 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
GARNL3-221ENST00000497703 OPLAHO14841 1288 aa12□□□□□ -0.49
GARNL3-221ENST00000497703 NEFLP07196 543 aa12□□□□□ -0.49
GARNL3-221ENST00000497703 FOXD4L4Q8WXT5 416 aaPredicted RBP12□□□□□ -0.49
GARNL3-221ENST00000497703 KLRG1Q96E93 195 aa12□□□□□ -0.49
GARNL3-221ENST00000497703 TRERF1Q96PN7 1200 aa12□□□□□ -0.49
GARNL3-221ENST00000497703 PHF24Q9UPV7 400 aa12□□□□□ -0.49
GARNL3-221ENST00000497703 KHNYNO15037 678 aaKnown RBP11.99□□□□□ -0.49
GARNL3-221ENST00000497703 FAM157BP0CG42 384 aa11.99□□□□□ -0.49
GARNL3-221ENST00000497703 GJD3Q8N144 294 aa11.99□□□□□ -0.49
GARNL3-221ENST00000497703 UBAP1LF5GYI3 381 aa11.98□□□□□ -0.49
GARNL3-221ENST00000497703 C11orf16Q9NQ32 467 aa11.98□□□□□ -0.49
GARNL3-221ENST00000497703 DCDC2BA2VCK2 349 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 CDC14CA4D256 554 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 LAMC2Q13753 1193 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 COL19A1Q14993 1142 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 DBN1Q16643 649 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 FAM129BQ96TA1 746 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 BCL2L13Q9BXK5 485 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 KCNH4Q9UQ05 1017 aa11.97□□□□□ -0.49
GARNL3-221ENST00000497703 FGD1P98174 961 aa11.96□□□□□ -0.49
GARNL3-221ENST00000497703 XYLBO75191 536 aa11.95□□□□□ -0.5
GARNL3-221ENST00000497703 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-221ENST00000497703 ZNF326Q5BKZ1 582 aaKnown RBP11.95□□□□□ -0.5
GARNL3-221ENST00000497703 ZNF438Q7Z4V0 828 aa11.95□□□□□ -0.5
GARNL3-221ENST00000497703 ZNF837Q96EG3 531 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-221ENST00000497703 ATXN7L1Q9ULK2 861 aaPredicted RBP11.95□□□□□ -0.5
GARNL3-221ENST00000497703 TREHO43280 583 aa11.94□□□□□ -0.5
GARNL3-221ENST00000497703 PPFIA3O75145 1194 aa11.94□□□□□ -0.5
GARNL3-221ENST00000497703 PDE12Q6L8Q7 609 aaKnown RBP11.94□□□□□ -0.5
GARNL3-221ENST00000497703 NPAS4Q8IUM7 802 aa11.94□□□□□ -0.5
GARNL3-221ENST00000497703 GTPBP3Q969Y2 492 aaKnown RBP11.94□□□□□ -0.5
GARNL3-221ENST00000497703 PNMA5Q96PV4 448 aa11.94□□□□□ -0.5
GARNL3-221ENST00000497703 USP20Q9Y2K6 914 aa11.94□□□□□ -0.5
GARNL3-221ENST00000497703 MAPTP10636 758 aaKnown RBP11.93□□□□□ -0.5
GARNL3-221ENST00000497703 KCNQ4P56696 695 aa11.93□□□□□ -0.5
GARNL3-221ENST00000497703 ATP2B2Q01814 1243 aa11.93□□□□□ -0.5
GARNL3-221ENST00000497703 NEUROD1Q13562 356 aa11.93□□□□□ -0.5
GARNL3-221ENST00000497703 SV2AQ7L0J3 742 aa11.93□□□□□ -0.5
GARNL3-221ENST00000497703 ALKBH8Q96BT7 664 aaKnown RBP11.93□□□□□ -0.5
GARNL3-221ENST00000497703 CUEDC1Q9NWM3 386 aaPredicted RBP11.93□□□□□ -0.5
GARNL3-221ENST00000497703 MARK1Q9P0L2 795 aa11.93□□□□□ -0.5
GARNL3-221ENST00000497703 MAPK8P45983 427 aa11.92□□□□□ -0.5
GARNL3-221ENST00000497703 TNP2Q05952 138 aa11.92□□□□□ -0.5
GARNL3-221ENST00000497703 NPM2Q86SE8 214 aaKnown RBP11.92□□□□□ -0.5
GARNL3-221ENST00000497703 ABHD17AQ96GS6 310 aa11.92□□□□□ -0.5
GARNL3-221ENST00000497703 NIF3L1Q9GZT8 377 aa11.92□□□□□ -0.5
GARNL3-221ENST00000497703 GPR182O15218 404 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 EFSO43281 561 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 BNIP3LO60238 219 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 CFHR5Q9BXR6 569 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 GGNBP2Q9H3C7 697 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 KCNMB2Q9Y691 235 aa11.91□□□□□ -0.5
GARNL3-221ENST00000497703 EGFRP00533 1210 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 THBS1P07996 1170 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 SFSWAPQ12872 951 aaKnown RBP11.9□□□□□ -0.5
GARNL3-221ENST00000497703 CCINQ13939 588 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 VWA5B2Q8N398 1253 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 GIPC2Q8TF65 315 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 EFCC1Q9HA90 598 aa11.9□□□□□ -0.5
GARNL3-221ENST00000497703 FGFR3P22607 806 aa11.89□□□□□ -0.51
GARNL3-221ENST00000497703 RBM25P49756 843 aaKnown RBP11.89□□□□□ -0.51
GARNL3-221ENST00000497703 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
GARNL3-221ENST00000497703 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-221ENST00000497703 TTC39BQ5VTQ0 682 aaPredicted RBP11.89□□□□□ -0.51
GARNL3-221ENST00000497703 XKR5Q6UX68 686 aa11.89□□□□□ -0.51
GARNL3-221ENST00000497703 SNX29Q8TEQ0 813 aa11.89□□□□□ -0.51
GARNL3-221ENST00000497703 ELP3Q9H9T3 547 aa11.89□□□□□ -0.51
GARNL3-221ENST00000497703 NXF1Q9UBU9 619 aaKnown RBP11.89□□□□□ -0.51
GARNL3-221ENST00000497703 RBM47A0AV96 593 aaKnown RBP11.88□□□□□ -0.51
GARNL3-221ENST00000497703 LCE2BO14633 110 aa11.88□□□□□ -0.51
GARNL3-221ENST00000497703 UBAP2LQ14157 1087 aaKnown RBP11.88□□□□□ -0.51
GARNL3-221ENST00000497703 NLRP13Q86W25 1043 aa11.88□□□□□ -0.51
GARNL3-221ENST00000497703 A6NHS1 94 aa11.87□□□□□ -0.51
GARNL3-221ENST00000497703 P4HBP07237 508 aaKnown RBP11.87□□□□□ -0.51
GARNL3-221ENST00000497703 ITGAEP38570 1179 aa11.87□□□□□ -0.51
GARNL3-221ENST00000497703 DSC3Q14574 896 aa11.87□□□□□ -0.51
GARNL3-221ENST00000497703 NPAS3Q8IXF0 933 aa11.87□□□□□ -0.51
GARNL3-221ENST00000497703 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
GARNL3-221ENST00000497703 ABI2Q9NYB9 513 aaPredicted RBP11.87□□□□□ -0.51
GARNL3-221ENST00000497703 POTECB2RU33 542 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 PHACTR2O75167 634 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 CD33P20138 364 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 SPEM2Q0P670 501 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 NANOS1Q8WY41 292 aaKnown RBP11.86□□□□□ -0.51
GARNL3-221ENST00000497703 PMEPA1Q969W9 287 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 DNAJC25Q9H1X3 360 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 PRR12Q9ULL5 1215 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 NISCHQ9Y2I1 1504 aa11.86□□□□□ -0.51
GARNL3-221ENST00000497703 CPNE3O75131 537 aaKnown RBP11.85□□□□□ -0.51
GARNL3-221ENST00000497703 TNFRSF21O75509 655 aa11.85□□□□□ -0.51
GARNL3-221ENST00000497703 LDHBP07195 334 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms