RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 ZRSR1Q15695 479 aaKnown RBP15.32■□□□□ 0.04
GAPVD1-220ENST00000497580 IFFO2Q5TF58 517 aa15.32■□□□□ 0.04
GAPVD1-220ENST00000497580 SECISBP2LQ93073 1101 aaKnown RBP15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 LTV1Q96GA3 475 aaPredicted RBP15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 CWC15Q9P013 229 aaKnown RBP15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 C14orf37Q86TY3 774 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 PGBD1Q96JS3 809 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 PPP1R13BQ96KQ4 1090 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 TSPYL4Q9UJ04 414 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 ZKSCAN1P17029 563 aaPredicted RBP15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 IL13P35225 146 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 DRC1Q96MC2 740 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 ZSWIM4Q9H7M6 989 aa15.31■□□□□ 0.04
GAPVD1-220ENST00000497580 TULP4Q9NRJ4 1543 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 NRDCO43847 1150 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 SFPQP23246 707 aaKnown RBP eCLIP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 COL9A3Q14050 684 aaPredicted RBP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 SMC1AQ14683 1233 aaKnown RBP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 NFATC2IPQ8NCF5 419 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 COG3Q96JB2 828 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 ZSCAN31Q96LW9 406 aaPredicted RBP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 SH2B1Q9NRF2 756 aaPredicted RBP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 ZCCHC11Q5TAX3 1644 aaKnown RBP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 CASQ1P31415 396 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 PTPN21Q16825 1174 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 FTOQ9C0B1 505 aaKnown RBP eCLIP15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
GAPVD1-220ENST00000497580 E4F1Q66K89 784 aaPredicted RBP15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 DNAJC5Q9H3Z4 198 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 SALL3Q9BXA9 1300 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 KIF2AO00139 706 aaPredicted RBP15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 IFIT2P09913 472 aaKnown RBP15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 PDCP20941 246 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 AK7Q96M32 723 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 GNAI3P08754 354 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 UBTFL1P0CB47 393 aaPredicted RBP15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 EVCP57679 992 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 STX1AQ16623 288 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 NUTM2GQ5VZR2 741 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 GOLGA6L1Q8N7Z2 621 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 MRFAP1L1Q96HT8 127 aa15.29■□□□□ 0.04
GAPVD1-220ENST00000497580 KIAA1210Q9ULL0 1709 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 BIN1O00499 593 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 ATP8B2P98198 1209 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 ORC3Q9UBD5 711 aaPredicted RBP15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 RRP15Q9Y3B9 282 aaKnown RBP15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 JAK2O60674 1132 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 IQCB1Q15051 598 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 CCDC73Q6ZRK6 1079 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 EFCC1Q9HA90 598 aa15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 KINO60870 393 aaKnown RBP15.28■□□□□ 0.04
GAPVD1-220ENST00000497580 PNPLA6Q8IY17 1366 aa15.27■□□□□ 0.04
GAPVD1-220ENST00000497580 VPS53Q5VIR6 699 aa15.27■□□□□ 0.04
GAPVD1-220ENST00000497580 ISM2Q6H9L7 571 aa15.27■□□□□ 0.04
GAPVD1-220ENST00000497580 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.04
GAPVD1-220ENST00000497580 IFNKQ9P0W0 207 aa15.27■□□□□ 0.04
GAPVD1-220ENST00000497580 FOXO3O43524 673 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 SDF4Q9BRK5 362 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 SASH3O75995 380 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 CDC25BP30305 580 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 GOLGA8FQ08AF8 430 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 GOLGA8DPQ0D2H9 430 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 SART3Q15020 963 aaKnown RBP15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.03
GAPVD1-220ENST00000497580 APPP05067 770 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 NPATQ14207 1427 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 SRGAP3O43295 1099 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 FAM193AP78312 1265 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 STAP2Q9UGK3 403 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 MCM6Q14566 821 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 PPP1R42Q7Z4L9 355 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 RHPN1Q8TCX5 695 aa15.26■□□□□ 0.03
GAPVD1-220ENST00000497580 ABCC1P33527 1531 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 GSDMDP57764 484 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 E2F4Q16254 413 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 BRF1Q92994 677 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 XPO4Q9C0E2 1151 aaKnown RBP15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 KIAA0232Q92628 1395 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 ELP1O95163 1332 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 CHL1O00533 1208 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 FLIIQ13045 1269 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 RUFY2Q8WXA3 655 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 SIL1Q9H173 461 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 VPS18Q9P253 973 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 RBM8AQ9Y5S9 174 aaKnown RBP15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 GUCY1B3Q02153 619 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 ICE2Q659A1 982 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 BLOC1S2Q6QNY1 142 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 PLEKHA4Q9H4M7 779 aa15.25■□□□□ 0.03
GAPVD1-220ENST00000497580 NOP2P46087 812 aaKnown RBP15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 ME1P48163 572 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 TEX2Q8IWB9 1127 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 L2HGDHQ9H9P8 463 aa15.24■□□□□ 0.03
GAPVD1-220ENST00000497580 ANO10Q9NW15 660 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms