RNA–Protein interactions for RNA: ENST00000497121.1

CPS1-208, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 4

Gene CPS1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-208ENST00000497121 GNAI1P63096 354 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 FKBP4Q02790 459 aaKnown RBP eCLIP9.59□□□□□ -0.87
CPS1-208ENST00000497121 CCDC27Q2M243 656 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
CPS1-208ENST00000497121 PPP1R42Q7Z4L9 355 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 PLBD2Q8NHP8 589 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 CRAMP1Q96RY5 1269 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 ISCA1Q9BUE6 129 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 DBF4Q9UBU7 674 aaPredicted RBP9.59□□□□□ -0.87
CPS1-208ENST00000497121 BCORQ6W2J9 1755 aa9.59□□□□□ -0.87
CPS1-208ENST00000497121 ELL2O00472 640 aaPredicted RBP9.58□□□□□ -0.88
CPS1-208ENST00000497121 VEGFAP15692 232 aaPredicted RBP9.58□□□□□ -0.88
CPS1-208ENST00000497121 CALD1Q05682 793 aaKnown RBP9.58□□□□□ -0.88
CPS1-208ENST00000497121 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
CPS1-208ENST00000497121 HSP90AB3PQ58FF7 597 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 ANKRD13DQ6ZTN6 518 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 WWC1Q8IX03 1113 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 RTKN2Q8IZC4 609 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 TSPYL6Q8N831 410 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 ZNF277Q9NRM2 450 aaPredicted RBP9.58□□□□□ -0.88
CPS1-208ENST00000497121 HYPKQ9NX55 129 aa9.58□□□□□ -0.88
CPS1-208ENST00000497121 RNF123Q5XPI4 1314 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 COL11A2P13942 1736 aaPredicted RBP9.57□□□□□ -0.88
CPS1-208ENST00000497121 DDNO94850 711 aaPredicted RBP9.57□□□□□ -0.88
CPS1-208ENST00000497121 HCLS1P14317 486 aaPredicted RBP9.57□□□□□ -0.88
CPS1-208ENST00000497121 FSTL1Q12841 308 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 CC2D2BQ6DHV5 1058 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 DNAJC5GQ8N7S2 189 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 RBM17Q96I25 401 aaKnown RBP9.57□□□□□ -0.88
CPS1-208ENST00000497121 NLRP3Q96P20 1036 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 PSMD1Q99460 953 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 PHAXQ9H814 394 aaKnown RBP9.57□□□□□ -0.88
CPS1-208ENST00000497121 MRS2Q9HD23 443 aa9.57□□□□□ -0.88
CPS1-208ENST00000497121 LAMB4A4D0S4 1761 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 DLEC1Q9Y238 1755 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 FZD9O00144 591 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 ANP32CO43423 234 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 RPGRQ92834 1020 aaKnown RBP9.56□□□□□ -0.88
CPS1-208ENST00000497121 TSR2Q969E8 191 aaKnown RBP9.56□□□□□ -0.88
CPS1-208ENST00000497121 TRMT112Q9UI30 125 aaKnown RBP9.56□□□□□ -0.88
CPS1-208ENST00000497121 SLX4Q8IY92 1834 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 IL16Q14005 1332 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 SH3TC1Q8TE82 1336 aa9.56□□□□□ -0.88
CPS1-208ENST00000497121 IARSP41252 1262 aaKnown RBP9.55□□□□□ -0.88
CPS1-208ENST00000497121 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
CPS1-208ENST00000497121 DPY19L2Q6NUT2 758 aa9.55□□□□□ -0.88
CPS1-208ENST00000497121 ZNF428Q96B54 188 aa9.55□□□□□ -0.88
CPS1-208ENST00000497121 L3MBTL3Q96JM7 780 aaPredicted RBP9.55□□□□□ -0.88
CPS1-208ENST00000497121 ATP6V0A2Q9Y487 856 aa9.55□□□□□ -0.88
CPS1-208ENST00000497121 ABCC4O15439 1325 aa9.55□□□□□ -0.88
CPS1-208ENST00000497121 ZNF541Q9H0D2 1346 aa9.55□□□□□ -0.88
CPS1-208ENST00000497121 PPEF1O14829 653 aaPredicted RBP9.54□□□□□ -0.88
CPS1-208ENST00000497121 BBOX1O75936 387 aa9.54□□□□□ -0.88
CPS1-208ENST00000497121 APLP1P51693 650 aa9.54□□□□□ -0.88
CPS1-208ENST00000497121 SF3B3Q15393 1217 aaKnown RBP9.54□□□□□ -0.88
CPS1-208ENST00000497121 C16orf71Q8IYS4 520 aaPredicted RBP9.54□□□□□ -0.88
CPS1-208ENST00000497121 SMC1BQ8NDV3 1235 aa9.54□□□□□ -0.88
CPS1-208ENST00000497121 FAM89AQ96GI7 184 aa9.54□□□□□ -0.88
CPS1-208ENST00000497121 TNRC6CQ9HCJ0 1690 aaKnown RBP9.54□□□□□ -0.88
CPS1-208ENST00000497121 TCERG1O14776 1098 aaKnown RBP9.53□□□□□ -0.88
CPS1-208ENST00000497121 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 POTEJP0CG39 1038 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 HTRA3P83110 453 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 CCDC30Q5VVM6 783 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 SP8Q8IXZ3 490 aa9.53□□□□□ -0.88
CPS1-208ENST00000497121 RTFDC1Q9BY42 306 aaPredicted RBP9.53□□□□□ -0.88
CPS1-208ENST00000497121 SPINK5Q9NQ38 1064 aaPredicted RBP9.53□□□□□ -0.88
CPS1-208ENST00000497121 SBF1O95248 1867 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 GRAPQ13588 217 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 RIC3Q7Z5B4 369 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 WDR63Q8IWG1 891 aa9.52□□□□□ -0.89
CPS1-208ENST00000497121 ZBTB38Q8NAP3 1195 aaPredicted RBP9.52□□□□□ -0.89
CPS1-208ENST00000497121 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.89
CPS1-208ENST00000497121 TAF1DQ9H5J8 278 aaPredicted RBP9.52□□□□□ -0.89
CPS1-208ENST00000497121 COL4A5P29400 1685 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 IRS4O14654 1257 aaPredicted RBP9.51□□□□□ -0.89
CPS1-208ENST00000497121 VAMP4O75379 141 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 IGKV5-2P06315 115 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 TWISTNBQ3B726 338 aaPredicted RBP9.51□□□□□ -0.89
CPS1-208ENST00000497121 DDX46Q7L014 1031 aaKnown RBP9.51□□□□□ -0.89
CPS1-208ENST00000497121 CCDC191Q8NCU4 936 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 CELF1Q92879 486 aaKnown RBP9.51□□□□□ -0.89
CPS1-208ENST00000497121 MYD88Q99836 296 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 METTL22Q9BUU2 404 aaPredicted RBP9.51□□□□□ -0.89
CPS1-208ENST00000497121 CHMP4AQ9BY43 222 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 VPS33BQ9H267 617 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 FANCIQ9NVI1 1328 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 FER1L6Q2WGJ9 1857 aa9.51□□□□□ -0.89
CPS1-208ENST00000497121 NUP98P52948 1817 aa9.5□□□□□ -0.89
CPS1-208ENST00000497121 PI4KAP2A4QPH2 592 aa9.5□□□□□ -0.89
CPS1-208ENST00000497121 PCCAP05165 728 aaPredicted RBP9.5□□□□□ -0.89
CPS1-208ENST00000497121 RTL5Q5HYW3 569 aaPredicted RBP9.5□□□□□ -0.89
CPS1-208ENST00000497121 CHADLQ6NUI6 762 aa9.5□□□□□ -0.89
CPS1-208ENST00000497121 KSR2Q6VAB6 950 aa9.5□□□□□ -0.89
CPS1-208ENST00000497121 GPC2Q8N158 579 aa9.5□□□□□ -0.89
CPS1-208ENST00000497121 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms