RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 ARMC2Q8NEN0 867 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 PRDM11Q9NQV5 511 aa8.38□□□□□ -1.07
SIK3-213ENST00000497049 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
SIK3-213ENST00000497049 RTL1A6NKG5 1358 aa8.37□□□□□ -1.07
SIK3-213ENST00000497049 USP54Q70EL1 1684 aa8.37□□□□□ -1.07
SIK3-213ENST00000497049 KCNH2Q12809 1159 aa8.37□□□□□ -1.07
SIK3-213ENST00000497049 WDR43Q15061 677 aaKnown RBP eCLIP8.37□□□□□ -1.07
SIK3-213ENST00000497049 KIAA0232Q92628 1395 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 MED1Q15648 1581 aaPredicted RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 NFAT5O94916 1531 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 U2AF1L5P0DN76 240 aaPredicted RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 EVA1CP58658 441 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 U2AF1Q01081 240 aaKnown RBP eCLIP8.36□□□□□ -1.07
SIK3-213ENST00000497049 CHRNA2Q15822 529 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 ERICH6Q7L0X2 663 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 FAM9BQ8IZU0 186 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 FNBP4Q8N3X1 1017 aaPredicted RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 BANK1Q8NDB2 785 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 COL16A1Q07092 1604 aaPredicted RBP8.36□□□□□ -1.07
SIK3-213ENST00000497049 KIF20BQ96Q89 1820 aa8.36□□□□□ -1.07
SIK3-213ENST00000497049 PHLPP1O60346 1717 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 ANKRD26Q9UPS8 1709 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 U2SURPO15042 1029 aaKnown RBP8.35□□□□□ -1.07
SIK3-213ENST00000497049 AP1G2O75843 785 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 CTHP32929 405 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 WNT7BP56706 349 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 TRIM32Q13049 653 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 NBPF6Q5VWK0 638 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 ANKRD24Q8TF21 1146 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 NBPF4Q96M43 638 aa8.35□□□□□ -1.07
SIK3-213ENST00000497049 MAP2P11137 1827 aaKnown RBP8.35□□□□□ -1.07
SIK3-213ENST00000497049 CDK12Q9NYV4 1490 aaPredicted RBP8.34□□□□□ -1.07
SIK3-213ENST00000497049 ZBTB7CA1YPR0 619 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 ADAMTS2O95450 1211 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 F12P00748 615 aaPredicted RBP8.34□□□□□ -1.07
SIK3-213ENST00000497049 LAPTM4AQ15012 233 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 PLA2G2CQ5R387 149 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 LIAT1Q6ZQX7 453 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
SIK3-213ENST00000497049 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 LTV1Q96GA3 475 aaPredicted RBP8.34□□□□□ -1.07
SIK3-213ENST00000497049 NGLY1Q96IV0 654 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 PLEKHF1Q96S99 279 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 CARD10Q9BWT7 1032 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 UNC93B1Q9H1C4 597 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 BTG4Q9NY30 223 aa8.34□□□□□ -1.07
SIK3-213ENST00000497049 IGSF1Q8N6C5 1336 aa8.33□□□□□ -1.08
SIK3-213ENST00000497049 COL22A1Q8NFW1 1626 aaPredicted RBP8.33□□□□□ -1.08
SIK3-213ENST00000497049 ZNF697Q5TEC3 545 aa8.33□□□□□ -1.08
SIK3-213ENST00000497049 NBPF14Q5TI25 921 aa8.33□□□□□ -1.08
SIK3-213ENST00000497049 SULT6B1Q6IMI4 303 aa8.33□□□□□ -1.08
SIK3-213ENST00000497049 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
SIK3-213ENST00000497049 WDR17Q8IZU2 1322 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 ZC3H4Q9UPT8 1303 aaKnown RBP8.32□□□□□ -1.08
SIK3-213ENST00000497049 MARF1Q9Y4F3 1742 aaKnown RBP8.32□□□□□ -1.08
SIK3-213ENST00000497049 USP17L8P0C7I0 530 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 CSB-PGBD3P0DP91 1061 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 UNC5CLQ8IV45 518 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
SIK3-213ENST00000497049 NLRP2Q9NX02 1062 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 ABCC6O95255 1503 aa8.32□□□□□ -1.08
SIK3-213ENST00000497049 NEFMP07197 916 aa8.31□□□□□ -1.08
SIK3-213ENST00000497049 HMOX1P09601 288 aa8.31□□□□□ -1.08
SIK3-213ENST00000497049 LARP1Q6PKG0 1096 aaKnown RBP8.31□□□□□ -1.08
SIK3-213ENST00000497049 TOM1L2Q6ZVM7 507 aa8.31□□□□□ -1.08
SIK3-213ENST00000497049 THRAP3Q9Y2W1 955 aaKnown RBP8.31□□□□□ -1.08
SIK3-213ENST00000497049 KDRP35968 1356 aa8.31□□□□□ -1.08
SIK3-213ENST00000497049 CAMTA1Q9Y6Y1 1673 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 FANCIQ9NVI1 1328 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PHRF1Q9P1Y6 1649 aaKnown RBP8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRKAR2BP31323 418 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRR20EP86478 221 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRR20CP86479 221 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRR20DP86480 221 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRR20BP86481 221 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRR20AP86496 221 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 VPS72Q15906 364 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 AMOTQ4VCS5 1084 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PLEKHO1Q53GL0 409 aaPredicted RBP8.3□□□□□ -1.08
SIK3-213ENST00000497049 MEX3CQ5U5Q3 659 aaKnown RBP8.3□□□□□ -1.08
SIK3-213ENST00000497049 TCP11L2Q8N4U5 519 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 EMID1Q96A84 441 aaPredicted RBP8.3□□□□□ -1.08
SIK3-213ENST00000497049 PHACTR3Q96KR7 559 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 C8orf37Q96NL8 207 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 STRN4Q9NRL3 753 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 COL18A1P39060 1754 aa8.3□□□□□ -1.08
SIK3-213ENST00000497049 APAF1O14727 1248 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 HTATSF1O43719 755 aaKnown RBP8.29□□□□□ -1.08
SIK3-213ENST00000497049 TMPOP42166 694 aaKnown RBP8.29□□□□□ -1.08
SIK3-213ENST00000497049 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 ERICH6BQ5W0A0 696 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 AEBP1Q8IUX7 1158 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 CDCA7Q9BWT1 371 aaPredicted RBP8.29□□□□□ -1.08
SIK3-213ENST00000497049 MAP10Q9P2G4 905 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms