RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 HNRNPUQ00839 825 aaKnown RBP eCLIP24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 FLIIQ13045 1269 aa24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 TRIM28Q13263 835 aaKnown RBP24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 ERFEQ4G0M1 354 aa24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 KSR2Q6VAB6 950 aa24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 ISCA1Q9BUE6 129 aa24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 TRMT112Q9UI30 125 aaKnown RBP24.62■■□□□ 1.53
CTDSP1-213ENST00000496785 SH3TC1Q8TE82 1336 aa24.61■■□□□ 1.53
CTDSP1-213ENST00000496785 ARFGEF1Q9Y6D6 1849 aa24.61■■□□□ 1.53
CTDSP1-213ENST00000496785 NPR1P16066 1061 aa24.61■■□□□ 1.53
CTDSP1-213ENST00000496785 NEXNQ0ZGT2 675 aa24.61■■□□□ 1.53
CTDSP1-213ENST00000496785 ABCC12Q96J65 1359 aa24.61■■□□□ 1.53
CTDSP1-213ENST00000496785 METTL22Q9BUU2 404 aaPredicted RBP24.6■■□□□ 1.53
CTDSP1-213ENST00000496785 CHD4Q14839 1912 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 COL11A2P13942 1736 aaPredicted RBP24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 PI4KAP2A4QPH2 592 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 CT47B1P0C2W7 299 aaPredicted RBP24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 FKBP5Q13451 457 aaPredicted RBP24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 TRMT2AQ8IZ69 625 aaKnown RBP24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 PI4KAP1Q8N8J0 262 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 CDCA7LQ96GN5 454 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 NLRP3Q96P20 1036 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 MYD88Q99836 296 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 MAP3K2Q9Y2U5 619 aa24.59■■□□□ 1.53
CTDSP1-213ENST00000496785 ATP5J2-PTCD1G3V325 749 aa24.58■■□□□ 1.53
CTDSP1-213ENST00000496785 HSP90B1P14625 803 aaKnown RBP24.58■■□□□ 1.53
CTDSP1-213ENST00000496785 YY1P25490 414 aa24.58■■□□□ 1.53
CTDSP1-213ENST00000496785 SLC10A5Q5PT55 438 aa24.58■■□□□ 1.53
CTDSP1-213ENST00000496785 CCDC191Q8NCU4 936 aa24.58■■□□□ 1.53
CTDSP1-213ENST00000496785 ALDH1B1P30837 517 aa24.57■■□□□ 1.52
CTDSP1-213ENST00000496785 CRY2Q49AN0 593 aa24.57■■□□□ 1.52
CTDSP1-213ENST00000496785 RPGRQ92834 1020 aaKnown RBP24.57■■□□□ 1.52
CTDSP1-213ENST00000496785 SOGA3Q5TF21 947 aa24.56■■□□□ 1.52
CTDSP1-213ENST00000496785 ARHGAP27Q6ZUM4 889 aa24.56■■□□□ 1.52
CTDSP1-213ENST00000496785 G2E3Q7L622 706 aa24.56■■□□□ 1.52
CTDSP1-213ENST00000496785 ADCY9O60503 1353 aa24.55■■□□□ 1.52
CTDSP1-213ENST00000496785 CWC25Q9NXE8 425 aaPredicted RBP24.55■■□□□ 1.52
CTDSP1-213ENST00000496785 TNRC6CQ9HCJ0 1690 aaKnown RBP24.54■■□□□ 1.52
CTDSP1-213ENST00000496785 DNAAF4Q8WXU2 420 aa24.54■■□□□ 1.52
CTDSP1-213ENST00000496785 ALDH1L2Q3SY69 923 aa24.53■■□□□ 1.52
CTDSP1-213ENST00000496785 PRPF40BQ6NWY9 871 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-213ENST00000496785 ZBTB38Q8NAP3 1195 aaPredicted RBP24.53■■□□□ 1.52
CTDSP1-213ENST00000496785 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
CTDSP1-213ENST00000496785 HOXA10P31260 410 aaPredicted RBP24.52■■□□□ 1.52
CTDSP1-213ENST00000496785 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
CTDSP1-213ENST00000496785 PCCAP05165 728 aaPredicted RBP24.51■■□□□ 1.51
CTDSP1-213ENST00000496785 FAM89AQ96GI7 184 aa24.51■■□□□ 1.51
CTDSP1-213ENST00000496785 LINS1Q8NG48 757 aa24.5■■□□□ 1.51
CTDSP1-213ENST00000496785 CRAMP1Q96RY5 1269 aa24.5■■□□□ 1.51
CTDSP1-213ENST00000496785 C21orf2O43822 256 aa24.49■■□□□ 1.51
CTDSP1-213ENST00000496785 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
CTDSP1-213ENST00000496785 NEURL1BA8MQ27 555 aa24.48■■□□□ 1.51
CTDSP1-213ENST00000496785 IRS4O14654 1257 aaPredicted RBP24.48■■□□□ 1.51
CTDSP1-213ENST00000496785 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
CTDSP1-213ENST00000496785 PTPRCP08575 1304 aa24.48■■□□□ 1.51
CTDSP1-213ENST00000496785 MRPL50Q8N5N7 158 aaKnown RBP24.48■■□□□ 1.51
CTDSP1-213ENST00000496785 CCDC93Q567U6 631 aa24.47■■□□□ 1.51
CTDSP1-213ENST00000496785 SSH1Q8WYL5 1049 aa24.47■■□□□ 1.51
CTDSP1-213ENST00000496785 TMX4Q9H1E5 349 aaPredicted RBP24.47■■□□□ 1.51
CTDSP1-213ENST00000496785 SMC4Q9NTJ3 1288 aa24.47■■□□□ 1.51
CTDSP1-213ENST00000496785 CDHR2Q9BYE9 1310 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 RTL5Q5HYW3 569 aaPredicted RBP24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 CC2D2BQ6DHV5 1058 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 DDX46Q7L014 1031 aaKnown RBP24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 SYNE4Q8N205 404 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 ZNF219Q9P2Y4 722 aaPredicted RBP24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 CACNA1SQ13698 1873 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 SLX4Q8IY92 1834 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 LAMB2P55268 1798 aa24.46■■□□□ 1.51
CTDSP1-213ENST00000496785 CWF19L2Q2TBE0 894 aaKnown RBP24.45■■□□□ 1.5
CTDSP1-213ENST00000496785 GRIPAP1Q4V328 841 aa24.45■■□□□ 1.5
CTDSP1-213ENST00000496785 C3orf67Q6ZVT6 689 aa24.45■■□□□ 1.5
CTDSP1-213ENST00000496785 DDX60Q8IY21 1712 aaKnown RBP24.44■■□□□ 1.5
CTDSP1-213ENST00000496785 LTBP3Q9NS15 1303 aa24.44■■□□□ 1.5
CTDSP1-213ENST00000496785 GOLGB1Q14789 3259 aaKnown RBP24.44■■□□□ 1.5
CTDSP1-213ENST00000496785 PDE8AO60658 829 aa24.44■■□□□ 1.5
CTDSP1-213ENST00000496785 SF3B3Q15393 1217 aaKnown RBP24.44■■□□□ 1.5
CTDSP1-213ENST00000496785 GCKRQ14397 625 aa24.43■■□□□ 1.5
CTDSP1-213ENST00000496785 RTKN2Q8IZC4 609 aa24.43■■□□□ 1.5
CTDSP1-213ENST00000496785 C7orf43Q8WVR3 580 aa24.43■■□□□ 1.5
CTDSP1-213ENST00000496785 ABCC4O15439 1325 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 F6X3S4 739 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 PPEF1O14829 653 aaPredicted RBP24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 BBOX1O75936 387 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 LMNB1P20700 586 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 TMC4Q7Z404 712 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 BCL2L13Q9BXK5 485 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 TAOK3Q9H2K8 898 aa24.42■■□□□ 1.5
CTDSP1-213ENST00000496785 ALDH1L1O75891 902 aa24.41■■□□□ 1.5
CTDSP1-213ENST00000496785 GRAPQ13588 217 aa24.41■■□□□ 1.5
CTDSP1-213ENST00000496785 BEND3Q5T5X7 828 aa24.41■■□□□ 1.5
CTDSP1-213ENST00000496785 C9orf131Q5VYM1 1079 aa24.41■■□□□ 1.5
CTDSP1-213ENST00000496785 GRAPLQ8TC17 118 aaPredicted RBP24.41■■□□□ 1.5
CTDSP1-213ENST00000496785 KIF16BQ96L93 1317 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 H7C1W4 665 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 NFKBIEO00221 500 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 BRPF1P55201 1214 aaPredicted RBP24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 RASSF7Q02833 373 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 CCDC152Q4G0S7 254 aa24.4■■□□□ 1.5
CTDSP1-213ENST00000496785 SLC4A10Q6U841 1118 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms