RNA–Protein interactions for RNA: ENST00000496756.2

PHGDH-207, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-207ENST00000496756 RGS19P49795 217 aa17.18■□□□□ 0.34
PHGDH-207ENST00000496756 PSMD1Q99460 953 aa17.18■□□□□ 0.34
PHGDH-207ENST00000496756 PCDH10Q9P2E7 1040 aa17.18■□□□□ 0.34
PHGDH-207ENST00000496756 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
PHGDH-207ENST00000496756 CCDC85CA6NKD9 419 aa17.17■□□□□ 0.34
PHGDH-207ENST00000496756 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
PHGDH-207ENST00000496756 EIF6P56537 245 aaKnown RBP17.17■□□□□ 0.34
PHGDH-207ENST00000496756 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
PHGDH-207ENST00000496756 OLFM4Q6UX06 510 aa17.17■□□□□ 0.34
PHGDH-207ENST00000496756 CAPNS2Q96L46 248 aa17.17■□□□□ 0.34
PHGDH-207ENST00000496756 USP16Q9Y5T5 823 aa17.17■□□□□ 0.34
PHGDH-207ENST00000496756 SNRPA1P09661 255 aaKnown RBP17.16■□□□□ 0.34
PHGDH-207ENST00000496756 GTF2E1P29083 439 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-207ENST00000496756 GRIPAP1Q4V328 841 aa17.16■□□□□ 0.34
PHGDH-207ENST00000496756 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
PHGDH-207ENST00000496756 PAXIP1Q6ZW49 1069 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-207ENST00000496756 GPR101Q96P66 508 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-207ENST00000496756 THSD7BQ9C0I4 1608 aa17.15■□□□□ 0.34
PHGDH-207ENST00000496756 GJA3Q9Y6H8 435 aa17.15■□□□□ 0.34
PHGDH-207ENST00000496756 COL3A1P02461 1466 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-207ENST00000496756 KCNQ3O43525 872 aa17.14■□□□□ 0.33
PHGDH-207ENST00000496756 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-207ENST00000496756 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-207ENST00000496756 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
PHGDH-207ENST00000496756 CA12O43570 354 aa17.13■□□□□ 0.33
PHGDH-207ENST00000496756 NEFMP07197 916 aa17.13■□□□□ 0.33
PHGDH-207ENST00000496756 MAP2K2P36507 400 aa17.13■□□□□ 0.33
PHGDH-207ENST00000496756 USP50Q70EL3 339 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-207ENST00000496756 FAM177BA6PVY3 158 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 GRM1Q13255 1194 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 CCDC27Q2M243 656 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 CYP4F22Q6NT55 531 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 NYXQ9GZU5 481 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 TLL2Q9Y6L7 1015 aa17.12■□□□□ 0.33
PHGDH-207ENST00000496756 SCNN1DP51172 638 aa17.11■□□□□ 0.33
PHGDH-207ENST00000496756 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
PHGDH-207ENST00000496756 ZNF521Q96K83 1311 aa17.11■□□□□ 0.33
PHGDH-207ENST00000496756 TRPM7Q96QT4 1865 aa17.11■□□□□ 0.33
PHGDH-207ENST00000496756 SNED1Q8TER0 1413 aa17.11■□□□□ 0.33
PHGDH-207ENST00000496756 PRAMEF22A3QJZ6 481 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 APAF1O14727 1248 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 EPS15P42566 896 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 CST9Q5W186 159 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 LARGE2Q8N3Y3 721 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 RTF1Q92541 710 aaKnown RBP17.1■□□□□ 0.33
PHGDH-207ENST00000496756 MAPK8IP3Q9UPT6 1336 aa17.1■□□□□ 0.33
PHGDH-207ENST00000496756 NBPF26B4DH59 902 aa17.09■□□□□ 0.33
PHGDH-207ENST00000496756 NBPF10Q6P3W6 841 aaKnown RBP17.09■□□□□ 0.33
PHGDH-207ENST00000496756 NBPF15Q8N660 670 aa17.09■□□□□ 0.33
PHGDH-207ENST00000496756 RPGRQ92834 1020 aaKnown RBP17.09■□□□□ 0.33
PHGDH-207ENST00000496756 SUPT16HQ9Y5B9 1047 aaKnown RBP17.09■□□□□ 0.33
PHGDH-207ENST00000496756 LTBP1Q14766 1721 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 E9PSI1 815 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 PRKAR2BP31323 418 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 FMR1Q06787 632 aaKnown RBP eCLIP17.08■□□□□ 0.321e-6■■□□□ 14.1
PHGDH-207ENST00000496756 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 HHIPL1Q96JK4 782 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 PHACTR3Q96KR7 559 aa17.08■□□□□ 0.32
PHGDH-207ENST00000496756 TRAF5O00463 557 aa17.07■□□□□ 0.32
PHGDH-207ENST00000496756 HOXA10P31260 410 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-207ENST00000496756 HLFQ16534 295 aa17.07■□□□□ 0.32
PHGDH-207ENST00000496756 WDR63Q8IWG1 891 aa17.07■□□□□ 0.32
PHGDH-207ENST00000496756 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
PHGDH-207ENST00000496756 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
PHGDH-207ENST00000496756 ADARB2Q9NS39 739 aaKnown RBP17.07■□□□□ 0.32
PHGDH-207ENST00000496756 ERVV-1B6SEH8 477 aa17.06■□□□□ 0.32
PHGDH-207ENST00000496756 BRPF1P55201 1214 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-207ENST00000496756 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
PHGDH-207ENST00000496756 TMX4Q9H1E5 349 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-207ENST00000496756 VPS33BQ9H267 617 aa17.06■□□□□ 0.32
PHGDH-207ENST00000496756 TSKSQ9UJT2 592 aa17.06■□□□□ 0.32
PHGDH-207ENST00000496756 SALL2Q9Y467 1007 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-207ENST00000496756 COL4A5P29400 1685 aa17.06■□□□□ 0.32
PHGDH-207ENST00000496756 RIC1Q4ADV7 1423 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 AOC2O75106 756 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 RBM17Q96I25 401 aaKnown RBP17.05■□□□□ 0.32
PHGDH-207ENST00000496756 CRAMP1Q96RY5 1269 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 MCOLN1Q9GZU1 580 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 RSPH6AQ9H0K4 717 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 GPRC5DQ9NZD1 345 aa17.05■□□□□ 0.32
PHGDH-207ENST00000496756 ABCC12Q96J65 1359 aa17.04■□□□□ 0.32
PHGDH-207ENST00000496756 CELF2O95319 508 aaKnown RBP17.04■□□□□ 0.32
PHGDH-207ENST00000496756 MCM10Q7L590 875 aa17.04■□□□□ 0.32
PHGDH-207ENST00000496756 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-207ENST00000496756 PPEF1O14829 653 aaPredicted RBP17.03■□□□□ 0.32
PHGDH-207ENST00000496756 PPIP5K2O43314 1243 aa17.03■□□□□ 0.32
PHGDH-207ENST00000496756 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
PHGDH-207ENST00000496756 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
PHGDH-207ENST00000496756 PLEKHF1Q96S99 279 aa17.03■□□□□ 0.32
PHGDH-207ENST00000496756 MAP3K15Q6ZN16 1313 aa17.02■□□□□ 0.32
PHGDH-207ENST00000496756 TAF7Q15545 349 aaPredicted RBP17.02■□□□□ 0.32
PHGDH-207ENST00000496756 KIF6Q6ZMV9 814 aa17.02■□□□□ 0.32
PHGDH-207ENST00000496756 WWC1Q8IX03 1113 aa17.02■□□□□ 0.32
PHGDH-207ENST00000496756 RCAN3Q9UKA8 241 aa17.02■□□□□ 0.32
PHGDH-207ENST00000496756 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.31
PHGDH-207ENST00000496756 CDHR2Q9BYE9 1310 aa17.01■□□□□ 0.31
PHGDH-207ENST00000496756 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
PHGDH-207ENST00000496756 DGKZQ13574 1117 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms