RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 C4BP0C0L5 1744 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 POLA2Q14181 598 aa20.99■□□□□ 0.95
LMNA-216ENST00000496738 PHF14O94880 888 aa20.98■□□□□ 0.95
LMNA-216ENST00000496738 HSP90AB3PQ58FF7 597 aa20.98■□□□□ 0.95
LMNA-216ENST00000496738 APBA3O96018 575 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 RC3H1Q5TC82 1133 aaKnown RBP20.97■□□□□ 0.95
LMNA-216ENST00000496738 NLRP10Q86W26 655 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
LMNA-216ENST00000496738 UBN2Q6ZU65 1347 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 SURF6O75683 361 aaKnown RBP20.97■□□□□ 0.95
LMNA-216ENST00000496738 MTX1Q13505 466 aa20.97■□□□□ 0.95
LMNA-216ENST00000496738 FAM177BA6PVY3 158 aa20.96■□□□□ 0.95
LMNA-216ENST00000496738 SYNE4Q8N205 404 aa20.96■□□□□ 0.95
LMNA-216ENST00000496738 AK7Q96M32 723 aa20.96■□□□□ 0.95
LMNA-216ENST00000496738 PA2G4Q9UQ80 394 aaKnown RBP20.96■□□□□ 0.95
LMNA-216ENST00000496738 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
LMNA-216ENST00000496738 ZBTB47Q9UFB7 747 aaPredicted RBP20.96■□□□□ 0.95
LMNA-216ENST00000496738 RTCBQ9Y3I0 505 aaKnown RBP20.96■□□□□ 0.95
LMNA-216ENST00000496738 C16orf71Q8IYS4 520 aaPredicted RBP20.95■□□□□ 0.94
LMNA-216ENST00000496738 SRP68Q9UHB9 627 aaKnown RBP20.95■□□□□ 0.94
LMNA-216ENST00000496738 ZNF34Q8IZ26 560 aa20.95■□□□□ 0.94
LMNA-216ENST00000496738 KLHDC4Q8TBB5 520 aa20.95■□□□□ 0.94
LMNA-216ENST00000496738 CHMP3Q9Y3E7 222 aa20.95■□□□□ 0.94
LMNA-216ENST00000496738 BCORQ6W2J9 1755 aa20.95■□□□□ 0.94
LMNA-216ENST00000496738 TXNRD1Q16881 649 aa20.94■□□□□ 0.94
LMNA-216ENST00000496738 PROM2Q8N271 834 aa20.94■□□□□ 0.94
LMNA-216ENST00000496738 FOXO4P98177 505 aa20.94■□□□□ 0.94
LMNA-216ENST00000496738 PCCAP05165 728 aaPredicted RBP20.93■□□□□ 0.94
LMNA-216ENST00000496738 SLC27A3Q5K4L6 730 aa20.93■□□□□ 0.94
LMNA-216ENST00000496738 USPL1Q5W0Q7 1092 aa20.93■□□□□ 0.94
LMNA-216ENST00000496738 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
LMNA-216ENST00000496738 TRMT112Q9UI30 125 aaKnown RBP20.93■□□□□ 0.94
LMNA-216ENST00000496738 DEKP35659 375 aaKnown RBP20.93■□□□□ 0.94
LMNA-216ENST00000496738 ZBTB38Q8NAP3 1195 aaPredicted RBP20.93■□□□□ 0.94
LMNA-216ENST00000496738 OTUD7AQ8TE49 926 aaPredicted RBP20.93■□□□□ 0.94
LMNA-216ENST00000496738 NIP7Q9Y221 180 aaKnown RBP eCLIP20.93■□□□□ 0.94
LMNA-216ENST00000496738 MSH5O43196 834 aa20.92■□□□□ 0.94
LMNA-216ENST00000496738 ARHGEF1Q92888 912 aaKnown RBP20.92■□□□□ 0.94
LMNA-216ENST00000496738 OS9Q13438 667 aaPredicted RBP20.92■□□□□ 0.94
LMNA-216ENST00000496738 SUSD4Q5VX71 490 aa20.92■□□□□ 0.94
LMNA-216ENST00000496738 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
LMNA-216ENST00000496738 CCDC85AQ96PX6 553 aaPredicted RBP20.92■□□□□ 0.94
LMNA-216ENST00000496738 LRRCC1Q9C099 1032 aa20.92■□□□□ 0.94
LMNA-216ENST00000496738 SIL1Q9H173 461 aa20.92■□□□□ 0.94
LMNA-216ENST00000496738 SCN7AQ01118 1682 aa20.91■□□□□ 0.94
LMNA-216ENST00000496738 RABL6Q3YEC7 729 aaPredicted RBP20.91■□□□□ 0.94
LMNA-216ENST00000496738 IL1RAPL2Q9NP60 686 aa20.91■□□□□ 0.94
LMNA-216ENST00000496738 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
LMNA-216ENST00000496738 TNS1Q9HBL0 1735 aaKnown RBP20.91■□□□□ 0.94
LMNA-216ENST00000496738 PKNOX2Q96KN3 472 aa20.9■□□□□ 0.94
LMNA-216ENST00000496738 BCL2L12Q9HB09 334 aa20.9■□□□□ 0.94
LMNA-216ENST00000496738 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
LMNA-216ENST00000496738 ZPR1O75312 459 aa20.89■□□□□ 0.94
LMNA-216ENST00000496738 C4AP0C0L4 1744 aa20.89■□□□□ 0.94
LMNA-216ENST00000496738 TRAPPC3LQ5T215 181 aa20.89■□□□□ 0.93
LMNA-216ENST00000496738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.88■□□□□ 0.93
LMNA-216ENST00000496738 PLSCR1O15162 318 aa20.88■□□□□ 0.93
LMNA-216ENST00000496738 RFC4P35249 363 aa20.88■□□□□ 0.93
LMNA-216ENST00000496738 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
LMNA-216ENST00000496738 ILDR1Q86SU0 546 aaPredicted RBP20.88■□□□□ 0.93
LMNA-216ENST00000496738 RHPN1Q8TCX5 695 aa20.88■□□□□ 0.93
LMNA-216ENST00000496738 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
LMNA-216ENST00000496738 RFX5P48382 616 aaPredicted RBP20.87■□□□□ 0.93
LMNA-216ENST00000496738 NOP58Q9Y2X3 529 aaKnown RBP20.87■□□□□ 0.93
LMNA-216ENST00000496738 CLEC4GQ6UXB4 293 aa20.87■□□□□ 0.93
LMNA-216ENST00000496738 NUTM1Q86Y26 1132 aa20.87■□□□□ 0.93
LMNA-216ENST00000496738 UTP14AQ9BVJ6 771 aaKnown RBP20.87■□□□□ 0.93
LMNA-216ENST00000496738 UBR3Q6ZT12 1888 aa20.87■□□□□ 0.93
LMNA-216ENST00000496738 CDHR2Q9BYE9 1310 aa20.86■□□□□ 0.93
LMNA-216ENST00000496738 RAB11FIP3O75154 756 aa20.86■□□□□ 0.93
LMNA-216ENST00000496738 PLEKHM2Q8IWE5 1019 aa20.86■□□□□ 0.93
LMNA-216ENST00000496738 PARP10Q53GL7 1025 aa20.86■□□□□ 0.93
LMNA-216ENST00000496738 HCLS1P14317 486 aaPredicted RBP20.85■□□□□ 0.93
LMNA-216ENST00000496738 PTPN12Q05209 780 aaKnown RBP20.85■□□□□ 0.93
LMNA-216ENST00000496738 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.931e-8■■■□□ 16.6
LMNA-216ENST00000496738 FAM161AQ3B820 660 aa20.85■□□□□ 0.93
LMNA-216ENST00000496738 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
LMNA-216ENST00000496738 USP42Q9H9J4 1324 aaKnown RBP20.85■□□□□ 0.93
LMNA-216ENST00000496738 NTSR2O95665 410 aa20.85■□□□□ 0.93
LMNA-216ENST00000496738 TSHZ3Q63HK5 1081 aa20.85■□□□□ 0.93
LMNA-216ENST00000496738 KIF1BPQ96EK5 621 aa20.85■□□□□ 0.93
LMNA-216ENST00000496738 ZNF594Q96JF6 807 aaPredicted RBP20.85■□□□□ 0.93
LMNA-216ENST00000496738 SH3TC1Q8TE82 1336 aa20.84■□□□□ 0.93
LMNA-216ENST00000496738 ZNF827Q17R98 1081 aa20.84■□□□□ 0.93
LMNA-216ENST00000496738 PLA2G12BQ9BX93 195 aa20.84■□□□□ 0.93
LMNA-216ENST00000496738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.84■□□□□ 0.93
LMNA-216ENST00000496738 C8orf34Q49A92 452 aa20.83■□□□□ 0.93
LMNA-216ENST00000496738 SASH1O94885 1247 aa20.83■□□□□ 0.92
LMNA-216ENST00000496738 CTSWP56202 376 aa20.83■□□□□ 0.92
LMNA-216ENST00000496738 COPRSQ9NQ92 184 aa20.83■□□□□ 0.92
LMNA-216ENST00000496738 BACH2Q9BYV9 841 aa20.82■□□□□ 0.92
LMNA-216ENST00000496738 PDE8AO60658 829 aa20.82■□□□□ 0.92
LMNA-216ENST00000496738 EN1Q05925 392 aaPredicted RBP20.82■□□□□ 0.92
LMNA-216ENST00000496738 TFCP2L1Q9NZI6 479 aa20.82■□□□□ 0.92
LMNA-216ENST00000496738 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
LMNA-216ENST00000496738 TTLL11Q8NHH1 800 aa20.81■□□□□ 0.92
LMNA-216ENST00000496738 GREM2Q9H772 168 aa20.81■□□□□ 0.92
LMNA-216ENST00000496738 CSF1RP07333 972 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms