RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 C3orf67Q6ZVT6 689 aa16.13■□□□□ 0.17
CLDN12-213ENST00000496677 TAOK3Q9H2K8 898 aa16.13■□□□□ 0.17
CLDN12-213ENST00000496677 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
CLDN12-213ENST00000496677 CEP350Q5VT06 3117 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 SNED1Q8TER0 1413 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 DICER1Q9UPY3 1922 aaKnown RBP16.12■□□□□ 0.17
CLDN12-213ENST00000496677 POTECB2RU33 542 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
CLDN12-213ENST00000496677 ALDH1B1P30837 517 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 TCIRG1Q13488 830 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 HDGFL1Q5TGJ6 251 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 PPP1R42Q7Z4L9 355 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 RBM46Q8TBY0 533 aaKnown RBP16.12■□□□□ 0.17
CLDN12-213ENST00000496677 CACNA1SQ13698 1873 aa16.12■□□□□ 0.17
CLDN12-213ENST00000496677 GNAI1P63096 354 aa16.11■□□□□ 0.17
CLDN12-213ENST00000496677 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
CLDN12-213ENST00000496677 CCDC93Q567U6 631 aa16.11■□□□□ 0.17
CLDN12-213ENST00000496677 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
CLDN12-213ENST00000496677 DBF4Q9UBU7 674 aaPredicted RBP16.11■□□□□ 0.17
CLDN12-213ENST00000496677 CALD1Q05682 793 aaKnown RBP16.1■□□□□ 0.17
CLDN12-213ENST00000496677 PLBD2Q8NHP8 589 aa16.1■□□□□ 0.17
CLDN12-213ENST00000496677 CRAMP1Q96RY5 1269 aa16.1■□□□□ 0.17
CLDN12-213ENST00000496677 UTP14AQ9BVJ6 771 aaKnown RBP16.1■□□□□ 0.17
CLDN12-213ENST00000496677 TIAM2Q8IVF5 1701 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
CLDN12-213ENST00000496677 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 HSP90AB3PQ58FF7 597 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 ANKRD13DQ6ZTN6 518 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 RTKN2Q8IZC4 609 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 C8orf58Q8NAV2 365 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 RNF123Q5XPI4 1314 aa16.09■□□□□ 0.17
CLDN12-213ENST00000496677 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
CLDN12-213ENST00000496677 SYNE4Q8N205 404 aa16.08■□□□□ 0.16
CLDN12-213ENST00000496677 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
CLDN12-213ENST00000496677 HYPKQ9NX55 129 aa16.08■□□□□ 0.16
CLDN12-213ENST00000496677 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
CLDN12-213ENST00000496677 FSTL1Q12841 308 aa16.07■□□□□ 0.16
CLDN12-213ENST00000496677 DPY19L2Q6NUT2 758 aa16.07■□□□□ 0.16
CLDN12-213ENST00000496677 RBM17Q96I25 401 aaKnown RBP16.07■□□□□ 0.16
CLDN12-213ENST00000496677 NLRP3Q96P20 1036 aa16.07■□□□□ 0.16
CLDN12-213ENST00000496677 WDR90Q96KV7 1748 aa16.07■□□□□ 0.16
CLDN12-213ENST00000496677 ELL2O00472 640 aaPredicted RBP16.06■□□□□ 0.16
CLDN12-213ENST00000496677 ANP32CO43423 234 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 TRIM28Q13263 835 aaKnown RBP16.06■□□□□ 0.16
CLDN12-213ENST00000496677 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 SLC51AQ86UW1 340 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 WWC1Q8IX03 1113 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 RPGRQ92834 1020 aaKnown RBP16.06■□□□□ 0.16
CLDN12-213ENST00000496677 PSMD1Q99460 953 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
CLDN12-213ENST00000496677 ZNF277Q9NRM2 450 aaPredicted RBP16.06■□□□□ 0.16
CLDN12-213ENST00000496677 DDNO94850 711 aaPredicted RBP16.05■□□□□ 0.16
CLDN12-213ENST00000496677 HCLS1P14317 486 aaPredicted RBP16.05■□□□□ 0.16
CLDN12-213ENST00000496677 C16orf71Q8IYS4 520 aaPredicted RBP16.05■□□□□ 0.16
CLDN12-213ENST00000496677 TSPYL6Q8N831 410 aa16.05■□□□□ 0.16
CLDN12-213ENST00000496677 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
CLDN12-213ENST00000496677 GRIPAP1Q4V328 841 aa16.04■□□□□ 0.16
CLDN12-213ENST00000496677 PHAXQ9H814 394 aaKnown RBP16.04■□□□□ 0.16
CLDN12-213ENST00000496677 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
CLDN12-213ENST00000496677 FZD9O00144 591 aa16.03■□□□□ 0.16
CLDN12-213ENST00000496677 IARSP41252 1262 aaKnown RBP16.03■□□□□ 0.16
CLDN12-213ENST00000496677 APLP1P51693 650 aa16.03■□□□□ 0.16
CLDN12-213ENST00000496677 DNAJC5GQ8N7S2 189 aa16.03■□□□□ 0.16
CLDN12-213ENST00000496677 ABCC4O15439 1325 aa16.02■□□□□ 0.16
CLDN12-213ENST00000496677 IL16Q14005 1332 aa16.02■□□□□ 0.16
CLDN12-213ENST00000496677 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
CLDN12-213ENST00000496677 PPEF1O14829 653 aaPredicted RBP16.02■□□□□ 0.16
CLDN12-213ENST00000496677 CACNB1Q02641 598 aaPredicted RBP16.02■□□□□ 0.16
CLDN12-213ENST00000496677 SMC1BQ8NDV3 1235 aa16.02■□□□□ 0.16
CLDN12-213ENST00000496677 TSR2Q969E8 191 aaKnown RBP16.02■□□□□ 0.16
CLDN12-213ENST00000496677 L3MBTL3Q96JM7 780 aaPredicted RBP16.02■□□□□ 0.16
CLDN12-213ENST00000496677 ATP6V0A2Q9Y487 856 aa16.02■□□□□ 0.16
CLDN12-213ENST00000496677 LAMB2P55268 1798 aa16.01■□□□□ 0.15
CLDN12-213ENST00000496677 BBOX1O75936 387 aa16.01■□□□□ 0.15
CLDN12-213ENST00000496677 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
CLDN12-213ENST00000496677 COL4A5P29400 1685 aa16.01■□□□□ 0.15
CLDN12-213ENST00000496677 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
CLDN12-213ENST00000496677 SF3B3Q15393 1217 aaKnown RBP16■□□□□ 0.15
CLDN12-213ENST00000496677 CCDC30Q5VVM6 783 aa16■□□□□ 0.15
CLDN12-213ENST00000496677 FAM89AQ96GI7 184 aa16■□□□□ 0.15
CLDN12-213ENST00000496677 TCERG1O14776 1098 aaKnown RBP15.99■□□□□ 0.15
CLDN12-213ENST00000496677 RIC3Q7Z5B4 369 aa15.99■□□□□ 0.15
CLDN12-213ENST00000496677 SP8Q8IXZ3 490 aa15.99■□□□□ 0.15
CLDN12-213ENST00000496677 RTFDC1Q9BY42 306 aaPredicted RBP15.99■□□□□ 0.15
CLDN12-213ENST00000496677 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
CLDN12-213ENST00000496677 DDX60Q8IY21 1712 aaKnown RBP15.99■□□□□ 0.15
CLDN12-213ENST00000496677 GOLGA2Q08379 1002 aa15.98■□□□□ 0.15
CLDN12-213ENST00000496677 GRAPQ13588 217 aa15.98■□□□□ 0.15
CLDN12-213ENST00000496677 WDR63Q8IWG1 891 aa15.98■□□□□ 0.15
CLDN12-213ENST00000496677 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
CLDN12-213ENST00000496677 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
CLDN12-213ENST00000496677 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
CLDN12-213ENST00000496677 VPS33BQ9H267 617 aa15.97■□□□□ 0.15
CLDN12-213ENST00000496677 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
CLDN12-213ENST00000496677 TAF1DQ9H5J8 278 aaPredicted RBP15.97■□□□□ 0.15
CLDN12-213ENST00000496677 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
CLDN12-213ENST00000496677 POTEIP0CG38 1075 aa15.96■□□□□ 0.15
CLDN12-213ENST00000496677 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
CLDN12-213ENST00000496677 HTRA3P83110 453 aa15.96■□□□□ 0.15
CLDN12-213ENST00000496677 TWISTNBQ3B726 338 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms