RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 ADH6P28332 368 aa11.12□□□□□ -0.63
SF3B1-212ENST00000496458 SCNN1AP37088 669 aa11.12□□□□□ -0.63
SF3B1-212ENST00000496458 SPEM2Q0P670 501 aa11.12□□□□□ -0.63
SF3B1-212ENST00000496458 SLCO4C1Q6ZQN7 724 aa11.12□□□□□ -0.63
SF3B1-212ENST00000496458 RAB44Q7Z6P3 723 aaPredicted RBP11.12□□□□□ -0.63
SF3B1-212ENST00000496458 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
SF3B1-212ENST00000496458 DNMT3AQ9Y6K1 912 aaPredicted RBP11.12□□□□□ -0.63
SF3B1-212ENST00000496458 MICAL2O94851 1124 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 NEDD1Q8NHV4 660 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 AVENQ9NQS1 362 aaPredicted RBP11.11□□□□□ -0.63
SF3B1-212ENST00000496458 LRRC4BQ9NT99 713 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 KLF15Q9UIH9 416 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 USTQ9Y2C2 406 aa11.11□□□□□ -0.63
SF3B1-212ENST00000496458 SHISA8B8ZZ34 492 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 SSFA2P28290 1259 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 INPP5BP32019 993 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 SYT9Q86SS6 491 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 TREML1Q86YW5 311 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 EDARADDQ8WWZ3 215 aa11.1□□□□□ -0.63
SF3B1-212ENST00000496458 EPB42P16452 691 aa11.09□□□□□ -0.63
SF3B1-212ENST00000496458 ARSDP51689 593 aa11.09□□□□□ -0.63
SF3B1-212ENST00000496458 FCHSD1Q86WN1 690 aa11.09□□□□□ -0.63
SF3B1-212ENST00000496458 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
SF3B1-212ENST00000496458 TNFRSF10BO14763 440 aa11.08□□□□□ -0.64
SF3B1-212ENST00000496458 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
SF3B1-212ENST00000496458 ETFBKMTQ8IXQ9 262 aa11.08□□□□□ -0.64
SF3B1-212ENST00000496458 EPXP11678 715 aa11.07□□□□□ -0.64
SF3B1-212ENST00000496458 GRNP28799 593 aaKnown RBP11.07□□□□□ -0.64
SF3B1-212ENST00000496458 MARSP56192 900 aaKnown RBP11.07□□□□□ -0.64
SF3B1-212ENST00000496458 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
SF3B1-212ENST00000496458 BHMTQ93088 406 aa11.07□□□□□ -0.64
SF3B1-212ENST00000496458 AMPD1P23109 780 aa11.06□□□□□ -0.64
SF3B1-212ENST00000496458 FAM26DQ5JW98 314 aa11.06□□□□□ -0.64
SF3B1-212ENST00000496458 USP20Q9Y2K6 914 aa11.06□□□□□ -0.64
SF3B1-212ENST00000496458 OPLAHO14841 1288 aa11.05□□□□□ -0.64
SF3B1-212ENST00000496458 PHLDB3Q6NSJ2 640 aa11.05□□□□□ -0.64
SF3B1-212ENST00000496458 SIN3BO75182 1162 aa11.04□□□□□ -0.64
SF3B1-212ENST00000496458 RGL4Q8IZJ4 473 aa11.04□□□□□ -0.64
SF3B1-212ENST00000496458 PNMA5Q96PV4 448 aa11.04□□□□□ -0.64
SF3B1-212ENST00000496458 GSX2Q9BZM3 304 aa11.04□□□□□ -0.64
SF3B1-212ENST00000496458 STIM2Q9P246 746 aa11.04□□□□□ -0.64
SF3B1-212ENST00000496458 CCINQ13939 588 aa11.03□□□□□ -0.64
SF3B1-212ENST00000496458 RRAGCQ9HB90 399 aa11.03□□□□□ -0.64
SF3B1-212ENST00000496458 RTCBQ9Y3I0 505 aaKnown RBP11.03□□□□□ -0.64
SF3B1-212ENST00000496458 CMTR1Q8N1G2 835 aaKnown RBP11.02□□□□□ -0.65
SF3B1-212ENST00000496458 HELQQ8TDG4 1101 aa11.02□□□□□ -0.65
SF3B1-212ENST00000496458 NFKB1P19838 968 aa11.01□□□□□ -0.65
SF3B1-212ENST00000496458 KRT25Q7Z3Z0 450 aa11.01□□□□□ -0.65
SF3B1-212ENST00000496458 ABTB2Q8N961 1025 aa11.01□□□□□ -0.65
SF3B1-212ENST00000496458 GTF3C2Q8WUA4 911 aaPredicted RBP11.01□□□□□ -0.65
SF3B1-212ENST00000496458 BTBD6Q96KE9 485 aa11.01□□□□□ -0.65
SF3B1-212ENST00000496458 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.01□□□□□ -0.65
SF3B1-212ENST00000496458 ELOA3CA0A087WX78 387 aaPredicted RBP11□□□□□ -0.65
SF3B1-212ENST00000496458 ELOA3DA6NLF2 546 aaPredicted RBP11□□□□□ -0.65
SF3B1-212ENST00000496458 ZAP70P43403 619 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 TBC1D8BQ0IIM8 1120 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 ELOA3BQ3SY89 546 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 B4GALNT3Q6L9W6 998 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 CHSY3Q70JA7 882 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 ELOA3Q8NG57 546 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 TNFRSF25Q93038 417 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 SCARF2Q96GP6 870 aaPredicted RBP11□□□□□ -0.65
SF3B1-212ENST00000496458 IGFLR1Q9H665 355 aa11□□□□□ -0.65
SF3B1-212ENST00000496458 ZBTB39O15060 712 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 SNRPNP63162 240 aaKnown RBP10.99□□□□□ -0.65
SF3B1-212ENST00000496458 MTMR3Q13615 1198 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 PODNQ7Z5L7 613 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 MDFIQ99750 246 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 EFCC1Q9HA90 598 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 CNTNAP5Q8WYK1 1306 aa10.99□□□□□ -0.65
SF3B1-212ENST00000496458 ADARB2-AS1A8MUL3 147 aa10.98□□□□□ -0.65
SF3B1-212ENST00000496458 RNF225M0QZC1 329 aaPredicted RBP10.98□□□□□ -0.65
SF3B1-212ENST00000496458 XYLBO75191 536 aa10.98□□□□□ -0.65
SF3B1-212ENST00000496458 ALAS2P22557 587 aa10.98□□□□□ -0.65
SF3B1-212ENST00000496458 ADH7P40394 386 aa10.98□□□□□ -0.65
SF3B1-212ENST00000496458 UBE2OQ9C0C9 1292 aaKnown RBP10.98□□□□□ -0.65
SF3B1-212ENST00000496458 SASH3O75995 380 aa10.97□□□□□ -0.65
SF3B1-212ENST00000496458 TARSP26639 723 aaKnown RBP10.97□□□□□ -0.65
SF3B1-212ENST00000496458 ZFATQ9P243 1243 aa10.97□□□□□ -0.65
SF3B1-212ENST00000496458 KCNMB2Q9Y691 235 aa10.97□□□□□ -0.65
SF3B1-212ENST00000496458 ABL1P00519 1130 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 RARAP10276 462 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 MPSTP25325 297 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 PDE4CQ08493 712 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 ATCAYQ86WG3 371 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 BEND7Q8N7W2 519 aaPredicted RBP10.96□□□□□ -0.65
SF3B1-212ENST00000496458 GPR152Q8TDT2 470 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 C11orf16Q9NQ32 467 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 FAM13BQ9NYF5 915 aa10.96□□□□□ -0.65
SF3B1-212ENST00000496458 HOXB4P17483 251 aaPredicted RBP10.95□□□□□ -0.66
SF3B1-212ENST00000496458 IRS1P35568 1242 aa10.95□□□□□ -0.66
SF3B1-212ENST00000496458 TRIP4Q15650 581 aaPredicted RBP10.95□□□□□ -0.66
SF3B1-212ENST00000496458 PIK3R5Q8WYR1 880 aa10.95□□□□□ -0.66
SF3B1-212ENST00000496458 PHF20L1A8MW92 1017 aa10.94□□□□□ -0.66
SF3B1-212ENST00000496458 EGFRP00533 1210 aa10.94□□□□□ -0.66
SF3B1-212ENST00000496458 DGKGP49619 791 aa10.94□□□□□ -0.66
SF3B1-212ENST00000496458 ZNF211Q13398 564 aaPredicted RBP10.94□□□□□ -0.66
SF3B1-212ENST00000496458 ANO2Q9NQ90 1003 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms