RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 MAN1A2O60476 641 aa8.95□□□□□ -0.98
SSR3-208ENST00000496050 INPP5BP32019 993 aa8.95□□□□□ -0.98
SSR3-208ENST00000496050 ITGAEP38570 1179 aa8.95□□□□□ -0.98
SSR3-208ENST00000496050 GAS2L1Q99501 681 aaPredicted RBP8.95□□□□□ -0.98
SSR3-208ENST00000496050 CRISPLD1Q9H336 500 aa8.95□□□□□ -0.98
SSR3-208ENST00000496050 EPB42P16452 691 aa8.94□□□□□ -0.98
SSR3-208ENST00000496050 VAMP1P23763 118 aa8.94□□□□□ -0.98
SSR3-208ENST00000496050 XPCQ01831 940 aaPredicted RBP8.94□□□□□ -0.98
SSR3-208ENST00000496050 NLRP8Q86W28 1048 aa8.94□□□□□ -0.98
SSR3-208ENST00000496050 CMTR1Q8N1G2 835 aaKnown RBP8.94□□□□□ -0.98
SSR3-208ENST00000496050 CEP63Q96MT8 703 aa8.94□□□□□ -0.98
SSR3-208ENST00000496050 DNMT3LQ9UJW3 386 aa8.94□□□□□ -0.98
SSR3-208ENST00000496050 RTCBQ9Y3I0 505 aaKnown RBP8.94□□□□□ -0.98
SSR3-208ENST00000496050 PRPF40AO75400 957 aaKnown RBP8.93□□□□□ -0.98
SSR3-208ENST00000496050 EFHC2Q5JST6 749 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 ALG1LQ6GMV1 187 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 XKR5Q6UX68 686 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 KLRG1Q96E93 195 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 GPAMQ9HCL2 828 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 C11orf16Q9NQ32 467 aa8.93□□□□□ -0.98
SSR3-208ENST00000496050 CSRNP1Q96S65 589 aa8.92□□□□□ -0.98
SSR3-208ENST00000496050 RUBCNLQ9H714 662 aa8.92□□□□□ -0.98
SSR3-208ENST00000496050 ATP13A2Q9NQ11 1180 aa8.92□□□□□ -0.98
SSR3-208ENST00000496050 UBAP1LF5GYI3 381 aa8.91□□□□□ -0.98
SSR3-208ENST00000496050 LBRQ14739 615 aaKnown RBP8.91□□□□□ -0.98
SSR3-208ENST00000496050 ENOX2Q16206 610 aaKnown RBP8.91□□□□□ -0.98
SSR3-208ENST00000496050 PDE12Q6L8Q7 609 aaKnown RBP8.91□□□□□ -0.98
SSR3-208ENST00000496050 DNAJC25Q9H1X3 360 aa8.91□□□□□ -0.98
SSR3-208ENST00000496050 SAMD5Q5TGI4 173 aa8.9□□□□□ -0.98
SSR3-208ENST00000496050 FIGNL1Q6PIW4 674 aa8.9□□□□□ -0.98
SSR3-208ENST00000496050 AAASQ9NRG9 546 aa8.9□□□□□ -0.98
SSR3-208ENST00000496050 PARP2Q9UGN5 583 aa8.9□□□□□ -0.98
SSR3-208ENST00000496050 USP20Q9Y2K6 914 aa8.9□□□□□ -0.98
SSR3-208ENST00000496050 PNMA6FA0A0J9YX94 578 aa8.89□□□□□ -0.99
SSR3-208ENST00000496050 EIF1AYO14602 144 aaKnown RBP8.89□□□□□ -0.99
SSR3-208ENST00000496050 TYRO3Q06418 890 aa8.89□□□□□ -0.99
SSR3-208ENST00000496050 RIPOR1Q6ZS17 1223 aa8.89□□□□□ -0.99
SSR3-208ENST00000496050 ZNF438Q7Z4V0 828 aa8.89□□□□□ -0.99
SSR3-208ENST00000496050 DUSP9Q99956 384 aaKnown RBP8.89□□□□□ -0.99
SSR3-208ENST00000496050 WWC3Q9ULE0 1092 aa8.89□□□□□ -0.99
SSR3-208ENST00000496050 A6NHS1 94 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 H7C1W4 665 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 CPNE3O75131 537 aaKnown RBP8.88□□□□□ -0.99
SSR3-208ENST00000496050 FBF1Q8TES7 1133 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 FRMD6Q96NE9 622 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 ZCCHC2Q9C0B9 1178 aaKnown RBP8.88□□□□□ -0.99
SSR3-208ENST00000496050 ELP3Q9H9T3 547 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 SENP2Q9HC62 589 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 MRS2Q9HD23 443 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 BRD7Q9NPI1 651 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 KCNMB2Q9Y691 235 aa8.88□□□□□ -0.99
SSR3-208ENST00000496050 XYLBO75191 536 aa8.87□□□□□ -0.99
SSR3-208ENST00000496050 ORC1Q13415 861 aa8.87□□□□□ -0.99
SSR3-208ENST00000496050 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
SSR3-208ENST00000496050 KCNH4Q9UQ05 1017 aa8.87□□□□□ -0.99
SSR3-208ENST00000496050 PCDHGC4Q9Y5F7 938 aa8.87□□□□□ -0.99
SSR3-208ENST00000496050 SENP3-EIF4A1A0A087X0R7 540 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 ATXN7O15265 892 aaPredicted RBP8.86□□□□□ -0.99
SSR3-208ENST00000496050 ST8SIA5O15466 376 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 EGFRP00533 1210 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 PTSQ03393 145 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 PSMD2Q13200 908 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 TMC4Q7Z404 712 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
SSR3-208ENST00000496050 SLC35F4A4IF30 521 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 SORBS3O60504 671 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 KCNQ4P56696 695 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 DAB2P98082 770 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 NLRP13Q86W25 1043 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 SNX29Q8TEQ0 813 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 ZFYVE28Q9HCC9 887 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 IGSF5Q9NSI5 407 aa8.85□□□□□ -0.99
SSR3-208ENST00000496050 PHACTR2O75167 634 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 TCF3P15923 654 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 MRPL58Q14197 206 aaKnown RBP8.84□□□□□ -0.99
SSR3-208ENST00000496050 TRIP4Q15650 581 aaPredicted RBP8.84□□□□□ -0.99
SSR3-208ENST00000496050 TSNAXIP1Q2TAA8 658 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 TTC39BQ5VTQ0 682 aaPredicted RBP8.84□□□□□ -0.99
SSR3-208ENST00000496050 GMCL1Q96IK5 515 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 BACH2Q9BYV9 841 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 NUCKS1Q9H1E3 243 aaKnown RBP8.84□□□□□ -0.99
SSR3-208ENST00000496050 DACH1Q9UI36 760 aa8.84□□□□□ -0.99
SSR3-208ENST00000496050 SOBPA7XYQ1 873 aa8.83□□□□□ -1
SSR3-208ENST00000496050 FAM157BP0CG42 384 aa8.83□□□□□ -1
SSR3-208ENST00000496050 GNA15P30679 374 aa8.83□□□□□ -1
SSR3-208ENST00000496050 LAMC2Q13753 1193 aa8.83□□□□□ -1
SSR3-208ENST00000496050 SETDB2Q96T68 719 aa8.83□□□□□ -1
SSR3-208ENST00000496050 NLRP2Q9NX02 1062 aa8.83□□□□□ -1
SSR3-208ENST00000496050 ABI2Q9NYB9 513 aaPredicted RBP8.83□□□□□ -1
SSR3-208ENST00000496050 FOXD3Q9UJU5 478 aaPredicted RBP8.83□□□□□ -1
SSR3-208ENST00000496050 SPG7Q9UQ90 795 aa8.83□□□□□ -1
SSR3-208ENST00000496050 GIPC1O14908 333 aa8.82□□□□□ -1
SSR3-208ENST00000496050 KHNYNO15037 678 aaKnown RBP8.82□□□□□ -1
SSR3-208ENST00000496050 CCINQ13939 588 aa8.82□□□□□ -1
SSR3-208ENST00000496050 TRIM22Q8IYM9 498 aa8.82□□□□□ -1
SSR3-208ENST00000496050 CCDC155Q8N6L0 562 aa8.82□□□□□ -1
SSR3-208ENST00000496050 FAM161BQ96MY7 647 aa8.82□□□□□ -1
SSR3-208ENST00000496050 AK5Q9Y6K8 562 aa8.82□□□□□ -1
SSR3-208ENST00000496050 GRNP28799 593 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms