RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 BEND3Q5T5X7 828 aa18.7■□□□□ 0.58
HDAC9-226ENST00000496026 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
HDAC9-226ENST00000496026 NUTM1Q86Y26 1132 aa18.7■□□□□ 0.58
HDAC9-226ENST00000496026 NEURL1BA8MQ27 555 aa18.69■□□□□ 0.58
HDAC9-226ENST00000496026 ERFEQ4G0M1 354 aa18.69■□□□□ 0.58
HDAC9-226ENST00000496026 ATF7IPQ6VMQ6 1270 aa18.69■□□□□ 0.58
HDAC9-226ENST00000496026 FHDC1Q9C0D6 1143 aaPredicted RBP18.69■□□□□ 0.58
HDAC9-226ENST00000496026 SRCIN1Q9C0H9 1055 aa18.69■□□□□ 0.58
HDAC9-226ENST00000496026 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
HDAC9-226ENST00000496026 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
HDAC9-226ENST00000496026 SH3TC1Q8TE82 1336 aa18.68■□□□□ 0.58
HDAC9-226ENST00000496026 ANKRD36CQ5JPF3 1778 aa18.68■□□□□ 0.58
HDAC9-226ENST00000496026 C10orf71Q711Q0 1435 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 ALDH1L1O75891 902 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 TRIM27P14373 513 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 GCKRQ14397 625 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 RTL5Q5HYW3 569 aaPredicted RBP18.67■□□□□ 0.58
HDAC9-226ENST00000496026 ZBTB38Q8NAP3 1195 aaPredicted RBP18.67■□□□□ 0.58
HDAC9-226ENST00000496026 CLUAP1Q96AJ1 413 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 FAM89AQ96GI7 184 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 BRIP1Q9BX63 1249 aa18.67■□□□□ 0.58
HDAC9-226ENST00000496026 FTSJ3Q8IY81 847 aaKnown RBP18.66■□□□□ 0.58
HDAC9-226ENST00000496026 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.66■□□□□ 0.58
HDAC9-226ENST00000496026 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 PCCAP05165 728 aaPredicted RBP18.65■□□□□ 0.58
HDAC9-226ENST00000496026 PDE6BP35913 854 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
HDAC9-226ENST00000496026 SYNE4Q8N205 404 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 JARID2Q92833 1246 aaPredicted RBP18.65■□□□□ 0.58
HDAC9-226ENST00000496026 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 TNNQ9UQP3 1299 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 NRXN2Q9P2S2 1712 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 ABCC12Q96J65 1359 aa18.65■□□□□ 0.58
HDAC9-226ENST00000496026 HCLS1P14317 486 aaPredicted RBP18.64■□□□□ 0.57
HDAC9-226ENST00000496026 TGFB2P61812 414 aa18.64■□□□□ 0.57
HDAC9-226ENST00000496026 DZIP1LQ8IYY4 767 aaKnown RBP18.64■□□□□ 0.57
HDAC9-226ENST00000496026 C9orf78Q9NZ63 289 aaPredicted RBP18.64■□□□□ 0.57
HDAC9-226ENST00000496026 ABCC4O15439 1325 aa18.64■□□□□ 0.57
HDAC9-226ENST00000496026 AFDNP55196 1824 aaKnown RBP18.63■□□□□ 0.57
HDAC9-226ENST00000496026 IRS4O14654 1257 aaPredicted RBP18.63■□□□□ 0.57
HDAC9-226ENST00000496026 PLIN1O60240 522 aa18.63■□□□□ 0.57
HDAC9-226ENST00000496026 HSP90B1P14625 803 aaKnown RBP18.63■□□□□ 0.57
HDAC9-226ENST00000496026 UBE3BQ7Z3V4 1068 aa18.63■□□□□ 0.57
HDAC9-226ENST00000496026 NLGN2Q8NFZ4 835 aa18.63■□□□□ 0.57
HDAC9-226ENST00000496026 A0A0G2JLW4 131 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 H0YIN7 160 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 H7C1W4 665 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 GRM8O00222 908 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 MS4A1P11836 297 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 SLC10A5Q5PT55 438 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 C2CD5Q86YS7 1000 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 PDZRN3Q9UPQ7 1066 aa18.62■□□□□ 0.57
HDAC9-226ENST00000496026 DPEP1P16444 411 aa18.61■□□□□ 0.57
HDAC9-226ENST00000496026 CHRNA5P30532 468 aa18.61■□□□□ 0.57
HDAC9-226ENST00000496026 INTS3Q68E01 1043 aaKnown RBP18.61■□□□□ 0.57
HDAC9-226ENST00000496026 RIC1Q4ADV7 1423 aa18.6■□□□□ 0.57
HDAC9-226ENST00000496026 CDHR2Q9BYE9 1310 aa18.6■□□□□ 0.57
HDAC9-226ENST00000496026 TMEM57Q8N5G2 664 aa18.6■□□□□ 0.57
HDAC9-226ENST00000496026 PDE8AO60658 829 aa18.59■□□□□ 0.57
HDAC9-226ENST00000496026 RPGRQ92834 1020 aaKnown RBP18.59■□□□□ 0.57
HDAC9-226ENST00000496026 KLRG2A4D1S0 409 aaPredicted RBP18.58■□□□□ 0.56
HDAC9-226ENST00000496026 RLBP1P12271 317 aa18.58■□□□□ 0.56
HDAC9-226ENST00000496026 CASP7P55210 303 aa18.58■□□□□ 0.56
HDAC9-226ENST00000496026 C3orf67Q6ZVT6 689 aa18.58■□□□□ 0.56
HDAC9-226ENST00000496026 ITPRIPQ8IWB1 547 aa18.58■□□□□ 0.56
HDAC9-226ENST00000496026 PANK1Q8TE04 598 aa18.58■□□□□ 0.56
HDAC9-226ENST00000496026 ZNF622Q969S3 477 aaKnown RBP eCLIP18.58■□□□□ 0.56
HDAC9-226ENST00000496026 NBPF7P0C2Y1 421 aaPredicted RBP18.57■□□□□ 0.56
HDAC9-226ENST00000496026 SRGNP10124 158 aa18.57■□□□□ 0.56
HDAC9-226ENST00000496026 RRP1P56182 461 aaKnown RBP18.57■□□□□ 0.56
HDAC9-226ENST00000496026 MASTLQ96GX5 879 aa18.57■□□□□ 0.56
HDAC9-226ENST00000496026 USP44Q9H0E7 712 aa18.57■□□□□ 0.56
HDAC9-226ENST00000496026 KIF13BQ9NQT8 1826 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 UTYO14607 1347 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 NPR1P16066 1061 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 KCNA3P22001 575 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 CRY2Q49AN0 593 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 PIM2Q9P1W9 311 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
HDAC9-226ENST00000496026 UBTFL1P0CB47 393 aaPredicted RBP18.55■□□□□ 0.56
HDAC9-226ENST00000496026 CTSWP56202 376 aa18.55■□□□□ 0.56
HDAC9-226ENST00000496026 PDE3AQ14432 1141 aa18.55■□□□□ 0.56
HDAC9-226ENST00000496026 CCDC152Q4G0S7 254 aa18.55■□□□□ 0.56
HDAC9-226ENST00000496026 STYK1Q6J9G0 422 aa18.55■□□□□ 0.56
HDAC9-226ENST00000496026 RBM17Q96I25 401 aaKnown RBP18.55■□□□□ 0.56
HDAC9-226ENST00000496026 ANKRD31Q8N7Z5 1873 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 TNRC6CQ9HCJ0 1690 aaKnown RBP18.54■□□□□ 0.56
HDAC9-226ENST00000496026 GNAI3P08754 354 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 SF3B3Q15393 1217 aaKnown RBP18.54■□□□□ 0.56
HDAC9-226ENST00000496026 DDX46Q7L014 1031 aaKnown RBP18.54■□□□□ 0.56
HDAC9-226ENST00000496026 PELP1Q8IZL8 1130 aaKnown RBP18.54■□□□□ 0.56
HDAC9-226ENST00000496026 CNKSR1Q969H4 720 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 SUCLG2Q96I99 432 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 CCDC85AQ96PX6 553 aaPredicted RBP18.54■□□□□ 0.56
HDAC9-226ENST00000496026 MEIS3Q99687 375 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 PLA2G12BQ9BX93 195 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 HDAC5Q9UQL6 1122 aa18.54■□□□□ 0.56
HDAC9-226ENST00000496026 C20orf194Q5TEA3 1177 aa18.53■□□□□ 0.56
HDAC9-226ENST00000496026 TTLL6Q8N841 843 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms