RNA–Protein interactions for RNA: ENST00000495985.5

ERCC8-207, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-207ENST00000495985 RBCK1Q9BYM8 510 aa6.74□□□□□ -1.33
ERCC8-207ENST00000495985 NUCKS1Q9H1E3 243 aaKnown RBP6.74□□□□□ -1.33
ERCC8-207ENST00000495985 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
ERCC8-207ENST00000495985 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 ATXN7O15265 892 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-207ENST00000495985 IGHA2P01877 340 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 ARSDP51689 593 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
ERCC8-207ENST00000495985 GRIN2CQ14957 1233 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 C8orf34Q49A92 452 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 ZSCAN29Q8IWY8 852 aaPredicted RBP6.73□□□□□ -1.33
ERCC8-207ENST00000495985 BRD7Q9NPI1 651 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 HCN2Q9UL51 889 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 KCNMB2Q9Y691 235 aa6.73□□□□□ -1.33
ERCC8-207ENST00000495985 KHNYNO15037 678 aaKnown RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 GPR182O15218 404 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 BNIP3LO60238 219 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 PPFIA3O75145 1194 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 TAGLNQ01995 201 aaKnown RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 TRIP4Q15650 581 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 SAMD5Q5TGI4 173 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 TRIM22Q8IYM9 498 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 GJD3Q8N144 294 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 PIK3R5Q8WYR1 880 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 GTPBP3Q969Y2 492 aaKnown RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 ZNF837Q96EG3 531 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 NIF3L1Q9GZT8 377 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 STRN4Q9NRL3 753 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 IGSF5Q9NSI5 407 aa6.72□□□□□ -1.33
ERCC8-207ENST00000495985 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
ERCC8-207ENST00000495985 H7C1W4 665 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 IGSF3O75054 1194 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 ZNF16P17020 682 aaPredicted RBP6.71□□□□□ -1.34
ERCC8-207ENST00000495985 TNP2Q05952 138 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 VWA5B2Q8N398 1253 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 ABHD17AQ96GS6 310 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 CITED4Q96RK1 184 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 FAM129BQ96TA1 746 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 PCDHGC4Q9Y5F7 938 aa6.71□□□□□ -1.34
ERCC8-207ENST00000495985 CDC14CA4D256 554 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 GPR25O00155 361 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 EFSO43281 561 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
ERCC8-207ENST00000495985 USP5P45974 858 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 VEGFBP49765 207 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 LBRQ14739 615 aaKnown RBP6.7□□□□□ -1.34
ERCC8-207ENST00000495985 NDFIP2Q9NV92 336 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 FAM13BQ9NYF5 915 aa6.7□□□□□ -1.34
ERCC8-207ENST00000495985 UBAP1LF5GYI3 381 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 TREHO43280 583 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
ERCC8-207ENST00000495985 FAM157BP0CG42 384 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 PCSK2P16519 638 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 MAPK8P45983 427 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 PLCB3Q01970 1234 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 PDE3BQ13370 1112 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 DSC3Q14574 896 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 FIGNL1Q6PIW4 674 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 GIPC2Q8TF65 315 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 MRRFQ96E11 262 aaKnown RBP6.69□□□□□ -1.34
ERCC8-207ENST00000495985 KCNH4Q9UQ05 1017 aa6.69□□□□□ -1.34
ERCC8-207ENST00000495985 XYLBO75191 536 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 SASH3O75995 380 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 EPB42P16452 691 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 EHHADHQ08426 723 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 KRT25Q7Z3Z0 450 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 TTC16Q8NEE8 873 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 DMRTB1Q96MA1 342 aa6.68□□□□□ -1.34
ERCC8-207ENST00000495985 CD33P20138 364 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 TARSP26639 723 aaKnown RBP6.67□□□□□ -1.34
ERCC8-207ENST00000495985 KCNQ4P56696 695 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 ORC1Q13415 861 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 FBXO33Q7Z6M2 555 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 ZNF775Q96BV0 537 aaPredicted RBP6.67□□□□□ -1.34
ERCC8-207ENST00000495985 SETDB2Q96T68 719 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 SLC30A3Q99726 388 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 GSX2Q9BZM3 304 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 ELP3Q9H9T3 547 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 TMEM63CQ9P1W3 806 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 FOXD3Q9UJU5 478 aaPredicted RBP6.67□□□□□ -1.34
ERCC8-207ENST00000495985 WWC3Q9ULE0 1092 aa6.67□□□□□ -1.34
ERCC8-207ENST00000495985 FNDC3AQ9Y2H6 1198 aaKnown RBP6.67□□□□□ -1.34
ERCC8-207ENST00000495985 RPLP1P05386 114 aaKnown RBP6.66□□□□□ -1.34
ERCC8-207ENST00000495985 CTBSQ01459 385 aa6.66□□□□□ -1.34
ERCC8-207ENST00000495985 FMR1Q06787 632 aaKnown RBP eCLIP6.66□□□□□ -1.34
ERCC8-207ENST00000495985 EAPPQ56P03 285 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-207ENST00000495985 SV2AQ7L0J3 742 aa6.66□□□□□ -1.34
ERCC8-207ENST00000495985 ZNF438Q7Z4V0 828 aa6.66□□□□□ -1.34
ERCC8-207ENST00000495985 RAB44Q7Z6P3 723 aaPredicted RBP6.66□□□□□ -1.34
ERCC8-207ENST00000495985 ALKBH8Q96BT7 664 aaKnown RBP6.66□□□□□ -1.34
ERCC8-207ENST00000495985 GMCL1Q96IK5 515 aa6.66□□□□□ -1.34
ERCC8-207ENST00000495985 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
ERCC8-207ENST00000495985 TNFRSF21O75509 655 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 EGFRP00533 1210 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 FGFR3P22607 806 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 XKR5Q6UX68 686 aa6.65□□□□□ -1.34
ERCC8-207ENST00000495985 GPR161Q8N6U8 529 aaKnown RBP6.65□□□□□ -1.34
ERCC8-207ENST00000495985 RNF19AQ9NV58 838 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms