RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 NYXQ9GZU5 481 aa19.57■□□□□ 0.72
RAPGEF3-215ENST00000495953 PARP3Q9Y6F1 533 aa19.57■□□□□ 0.72
RAPGEF3-215ENST00000495953 NEURL1BA8MQ27 555 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 IGKV5-2P06315 115 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 GPTP24298 496 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 RRP1P56182 461 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 PDE3AQ14432 1141 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 CWC25Q9NXE8 425 aaPredicted RBP19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 KIAA1551Q9HCM1 1747 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
RAPGEF3-215ENST00000495953 UBN2Q6ZU65 1347 aa19.55■□□□□ 0.72
RAPGEF3-215ENST00000495953 POLRMTO00411 1230 aaKnown RBP19.55■□□□□ 0.72
RAPGEF3-215ENST00000495953 MMP10P09238 476 aa19.55■□□□□ 0.72
RAPGEF3-215ENST00000495953 TPTE2Q6XPS3 522 aa19.55■□□□□ 0.72
RAPGEF3-215ENST00000495953 SERPINB2P05120 415 aa19.54■□□□□ 0.72
RAPGEF3-215ENST00000495953 UTP14AQ9BVJ6 771 aaKnown RBP19.54■□□□□ 0.72
RAPGEF3-215ENST00000495953 PLIN1O60240 522 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 DDR1Q08345 913 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 GCKRQ14397 625 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 CWF19L2Q2TBE0 894 aaKnown RBP19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 SUSD4Q5VX71 490 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 NBPF5PQ86XG9 351 aaPredicted RBP19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 CLUAP1Q96AJ1 413 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 CHD4Q14839 1912 aa19.53■□□□□ 0.72
RAPGEF3-215ENST00000495953 NTSR2O95665 410 aa19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 PCCAP05165 728 aaPredicted RBP19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 HSP90B1P14625 803 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 GPR162Q16538 588 aa19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 TRMT112Q9UI30 125 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 WWC3Q9ULE0 1092 aa19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 KIF13BQ9NQT8 1826 aa19.52■□□□□ 0.72
RAPGEF3-215ENST00000495953 CNBD1Q8NA66 436 aa19.51■□□□□ 0.71
RAPGEF3-215ENST00000495953 ZBTB38Q8NAP3 1195 aaPredicted RBP19.51■□□□□ 0.71
RAPGEF3-215ENST00000495953 TNNQ9UQP3 1299 aa19.51■□□□□ 0.71
RAPGEF3-215ENST00000495953 SH3TC1Q8TE82 1336 aa19.51■□□□□ 0.71
RAPGEF3-215ENST00000495953 NPHP1O15259 732 aa19.5■□□□□ 0.71
RAPGEF3-215ENST00000495953 GTF2E1P29083 439 aaPredicted RBP19.5■□□□□ 0.71
RAPGEF3-215ENST00000495953 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
RAPGEF3-215ENST00000495953 H7C1W4 665 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 RLBP1P12271 317 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 ST5P78524 1137 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 PELP1Q8IZL8 1130 aaKnown RBP19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 CHMP4BQ9H444 224 aaKnown RBP19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 C9orf78Q9NZ63 289 aaPredicted RBP19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 HDAC5Q9UQL6 1122 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 RIC1Q4ADV7 1423 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 UTYO14607 1347 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 CDHR2Q9BYE9 1310 aa19.49■□□□□ 0.71
RAPGEF3-215ENST00000495953 LAMB2P55268 1798 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 FAM177BA6PVY3 158 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 GRM8O00222 908 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 SLC10A5Q5PT55 438 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 PRR5LQ6MZQ0 368 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 PANK1Q8TE04 598 aa19.48■□□□□ 0.71
RAPGEF3-215ENST00000495953 YBX3P16989 372 aaKnown RBP eCLIP19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 MVPQ14764 893 aaKnown RBP19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 ITPRIPQ8IWB1 547 aa19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 ZNF784Q8NCA9 323 aaPredicted RBP19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 USP44Q9H0E7 712 aa19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
RAPGEF3-215ENST00000495953 GNAI3P08754 354 aa19.46■□□□□ 0.71
RAPGEF3-215ENST00000495953 FAM89AQ96GI7 184 aa19.46■□□□□ 0.71
RAPGEF3-215ENST00000495953 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 MYH3P11055 1940 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 CASP7P55210 303 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 ERFEQ4G0M1 354 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 UBE3BQ7Z3V4 1068 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 BRIP1Q9BX63 1249 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 PDZRN3Q9UPQ7 1066 aa19.45■□□□□ 0.7
RAPGEF3-215ENST00000495953 C10orf71Q711Q0 1435 aa19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 BRCA1P38398 1863 aaKnown RBP19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 IRS4O14654 1257 aaPredicted RBP19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 NUTM1Q86Y26 1132 aa19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 PLA2G12BQ9BX93 195 aa19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 COG6Q9Y2V7 657 aa19.44■□□□□ 0.7
RAPGEF3-215ENST00000495953 ANKRD31Q8N7Z5 1873 aa19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 PDE8AO60658 829 aa19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 UBTFL1P0CB47 393 aaPredicted RBP19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 PDE6BP35913 854 aa19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 NLRP3Q96P20 1036 aa19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 CD2APQ9Y5K6 639 aa19.43■□□□□ 0.7
RAPGEF3-215ENST00000495953 ZBTB7BO15156 539 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-215ENST00000495953 NBPF7P0C2Y1 421 aaPredicted RBP19.42■□□□□ 0.7
RAPGEF3-215ENST00000495953 KLRG2A4D1S0 409 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF3-215ENST00000495953 RTL5Q5HYW3 569 aaPredicted RBP19.41■□□□□ 0.7
RAPGEF3-215ENST00000495953 SYNE4Q8N205 404 aa19.41■□□□□ 0.7
RAPGEF3-215ENST00000495953 MEIS3Q99687 375 aa19.41■□□□□ 0.7
RAPGEF3-215ENST00000495953 ABCC12Q96J65 1359 aa19.41■□□□□ 0.7
RAPGEF3-215ENST00000495953 HCLS1P14317 486 aaPredicted RBP19.4■□□□□ 0.7
RAPGEF3-215ENST00000495953 TGFB2P61812 414 aa19.4■□□□□ 0.7
RAPGEF3-215ENST00000495953 AAMPQ13685 434 aa19.4■□□□□ 0.7
RAPGEF3-215ENST00000495953 SF3B3Q15393 1217 aaKnown RBP19.39■□□□□ 0.69
RAPGEF3-215ENST00000495953 JARID2Q92833 1246 aaPredicted RBP19.39■□□□□ 0.69
RAPGEF3-215ENST00000495953 GRIN3BO60391 1043 aa19.38■□□□□ 0.69
RAPGEF3-215ENST00000495953 GNAI2P04899 355 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms