RNA–Protein interactions for RNA: ENST00000495705.5

LMO4-204, Transcript of LIM domain only 4, humanhuman

TSL 3

Gene LMO4, Length 565 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-204ENST00000495705 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
LMO4-204ENST00000495705 SMC4Q9NTJ3 1288 aa25.56■■□□□ 1.68
LMO4-204ENST00000495705 COL11A2P13942 1736 aaPredicted RBP25.55■■□□□ 1.68
LMO4-204ENST00000495705 A0A0G2JLW4 131 aa25.55■■□□□ 1.68
LMO4-204ENST00000495705 NUTM1Q86Y26 1132 aa25.55■■□□□ 1.68
LMO4-204ENST00000495705 DNAAF4Q8WXU2 420 aa25.55■■□□□ 1.68
LMO4-204ENST00000495705 ABCC12Q96J65 1359 aa25.55■■□□□ 1.68
LMO4-204ENST00000495705 ERFEQ4G0M1 354 aa25.54■■□□□ 1.68
LMO4-204ENST00000495705 CCDC191Q8NCU4 936 aa25.54■■□□□ 1.68
LMO4-204ENST00000495705 TRMT112Q9UI30 125 aaKnown RBP25.54■■□□□ 1.68
LMO4-204ENST00000495705 PTPRCP08575 1304 aa25.54■■□□□ 1.68
LMO4-204ENST00000495705 TNRC6CQ9HCJ0 1690 aaKnown RBP25.53■■□□□ 1.68
LMO4-204ENST00000495705 H0YIN7 160 aa25.53■■□□□ 1.68
LMO4-204ENST00000495705 CHRNA5P30532 468 aa25.53■■□□□ 1.68
LMO4-204ENST00000495705 C2CD5Q86YS7 1000 aa25.53■■□□□ 1.68
LMO4-204ENST00000495705 BCL2L13Q9BXK5 485 aa25.53■■□□□ 1.68
LMO4-204ENST00000495705 SH3TC1Q8TE82 1336 aa25.53■■□□□ 1.68
LMO4-204ENST00000495705 RARSP54136 660 aaKnown RBP25.52■■□□□ 1.68
LMO4-204ENST00000495705 BRPF1P55201 1214 aaPredicted RBP25.52■■□□□ 1.68
LMO4-204ENST00000495705 CWC25Q9NXE8 425 aaPredicted RBP25.52■■□□□ 1.68
LMO4-204ENST00000495705 KLRG2A4D1S0 409 aaPredicted RBP25.51■■□□□ 1.67
LMO4-204ENST00000495705 KCNA3P22001 575 aa25.51■■□□□ 1.67
LMO4-204ENST00000495705 PIM2Q9P1W9 311 aa25.51■■□□□ 1.67
LMO4-204ENST00000495705 LAMB2P55268 1798 aa25.51■■□□□ 1.67
LMO4-204ENST00000495705 IGKV5-2P06315 115 aa25.5■■□□□ 1.67
LMO4-204ENST00000495705 PELP1Q8IZL8 1130 aaKnown RBP25.5■■□□□ 1.67
LMO4-204ENST00000495705 ARFGEF1Q9Y6D6 1849 aa25.49■■□□□ 1.67
LMO4-204ENST00000495705 GPR162Q16538 588 aa25.49■■□□□ 1.67
LMO4-204ENST00000495705 SLC10A5Q5PT55 438 aa25.49■■□□□ 1.67
LMO4-204ENST00000495705 LINS1Q8NG48 757 aa25.49■■□□□ 1.67
LMO4-204ENST00000495705 DDX60Q8IY21 1712 aaKnown RBP25.49■■□□□ 1.67
LMO4-204ENST00000495705 KIF16BQ96L93 1317 aa25.48■■□□□ 1.67
LMO4-204ENST00000495705 NEURL1BA8MQ27 555 aa25.48■■□□□ 1.67
LMO4-204ENST00000495705 F6X3S4 739 aa25.48■■□□□ 1.67
LMO4-204ENST00000495705 SRGNP10124 158 aa25.48■■□□□ 1.67
LMO4-204ENST00000495705 ZBTB38Q8NAP3 1195 aaPredicted RBP25.48■■□□□ 1.67
LMO4-204ENST00000495705 PCCAP05165 728 aaPredicted RBP25.47■■□□□ 1.67
LMO4-204ENST00000495705 STYK1Q6J9G0 422 aa25.47■■□□□ 1.67
LMO4-204ENST00000495705 MASTLQ96GX5 879 aa25.47■■□□□ 1.67
LMO4-204ENST00000495705 NLRP3Q96P20 1036 aa25.47■■□□□ 1.67
LMO4-204ENST00000495705 HSP90B1P14625 803 aaKnown RBP25.46■■□□□ 1.67
LMO4-204ENST00000495705 NPR1P16066 1061 aa25.46■■□□□ 1.67
LMO4-204ENST00000495705 CWF19L2Q2TBE0 894 aaKnown RBP25.46■■□□□ 1.67
LMO4-204ENST00000495705 CRY2Q49AN0 593 aa25.46■■□□□ 1.67
LMO4-204ENST00000495705 DALRD3Q5D0E6 543 aaKnown RBP25.46■■□□□ 1.67
LMO4-204ENST00000495705 FAM89AQ96GI7 184 aa25.46■■□□□ 1.67
LMO4-204ENST00000495705 BCS1LQ9Y276 419 aa25.46■■□□□ 1.67
LMO4-204ENST00000495705 GRIN3BO60391 1043 aa25.45■■□□□ 1.66
LMO4-204ENST00000495705 YBX3P16989 372 aaKnown RBP eCLIP25.45■■□□□ 1.66
LMO4-204ENST00000495705 BEND3Q5T5X7 828 aa25.45■■□□□ 1.66
LMO4-204ENST00000495705 TTLL6Q8N841 843 aa25.45■■□□□ 1.66
LMO4-204ENST00000495705 ZNF622Q969S3 477 aaKnown RBP eCLIP25.45■■□□□ 1.66
LMO4-204ENST00000495705 WWC3Q9ULE0 1092 aa25.45■■□□□ 1.66
LMO4-204ENST00000495705 CACNA1SQ13698 1873 aa25.45■■□□□ 1.66
LMO4-204ENST00000495705 CNKSR1Q969H4 720 aa25.44■■□□□ 1.66
LMO4-204ENST00000495705 YTHDC1Q96MU7 727 aaKnown RBP25.44■■□□□ 1.66
LMO4-204ENST00000495705 HCLS1P14317 486 aaPredicted RBP25.43■■□□□ 1.66
LMO4-204ENST00000495705 GCKRQ14397 625 aa25.43■■□□□ 1.66
LMO4-204ENST00000495705 SLC4A10Q6U841 1118 aa25.43■■□□□ 1.66
LMO4-204ENST00000495705 SYNE4Q8N205 404 aa25.43■■□□□ 1.66
LMO4-204ENST00000495705 NOB1Q9ULX3 412 aaKnown RBP25.43■■□□□ 1.66
LMO4-204ENST00000495705 CDHR2Q9BYE9 1310 aa25.42■■□□□ 1.66
LMO4-204ENST00000495705 IRS4O14654 1257 aaPredicted RBP25.42■■□□□ 1.66
LMO4-204ENST00000495705 ALDH1L1O75891 902 aa25.42■■□□□ 1.66
LMO4-204ENST00000495705 RPGRQ92834 1020 aaKnown RBP25.42■■□□□ 1.66
LMO4-204ENST00000495705 API5Q9BZZ5 524 aaKnown RBP25.42■■□□□ 1.66
LMO4-204ENST00000495705 SRCIN1Q9C0H9 1055 aa25.42■■□□□ 1.66
LMO4-204ENST00000495705 RTL5Q5HYW3 569 aaPredicted RBP25.41■■□□□ 1.66
LMO4-204ENST00000495705 ARHGAP45Q92619 1136 aa25.41■■□□□ 1.66
LMO4-204ENST00000495705 GOLGB1Q14789 3259 aaKnown RBP25.4■■□□□ 1.66
LMO4-204ENST00000495705 MYH3P11055 1940 aa25.4■■□□□ 1.66
LMO4-204ENST00000495705 IPO8O15397 1037 aaKnown RBP25.4■■□□□ 1.66
LMO4-204ENST00000495705 ALDH1B1P30837 517 aa25.4■■□□□ 1.66
LMO4-204ENST00000495705 HOXA10P31260 410 aaPredicted RBP25.4■■□□□ 1.66
LMO4-204ENST00000495705 H7C1W4 665 aa25.39■■□□□ 1.66
LMO4-204ENST00000495705 BCAR3O75815 825 aa25.39■■□□□ 1.66
LMO4-204ENST00000495705 C3orf67Q6ZVT6 689 aa25.39■■□□□ 1.66
LMO4-204ENST00000495705 RBM17Q96I25 401 aaKnown RBP25.39■■□□□ 1.66
LMO4-204ENST00000495705 SLX4Q8IY92 1834 aa25.38■■□□□ 1.65
LMO4-204ENST00000495705 UBE3BQ7Z3V4 1068 aa25.38■■□□□ 1.65
LMO4-204ENST00000495705 PDE8AO60658 829 aa25.37■■□□□ 1.65
LMO4-204ENST00000495705 PRPF40BQ6NWY9 871 aaKnown RBP25.37■■□□□ 1.65
LMO4-204ENST00000495705 CRAMP1Q96RY5 1269 aa25.37■■□□□ 1.65
LMO4-204ENST00000495705 SF3B3Q15393 1217 aaKnown RBP25.36■■□□□ 1.65
LMO4-204ENST00000495705 CHD4Q14839 1912 aa25.35■■□□□ 1.65
LMO4-204ENST00000495705 GRM8O00222 908 aa25.35■■□□□ 1.65
LMO4-204ENST00000495705 JARID2Q92833 1246 aaPredicted RBP25.35■■□□□ 1.65
LMO4-204ENST00000495705 FRAT1Q92837 279 aaPredicted RBP25.35■■□□□ 1.65
LMO4-204ENST00000495705 CCT4P50991 539 aaKnown RBP25.34■■□□□ 1.65
LMO4-204ENST00000495705 ATF7IPQ6VMQ6 1270 aa25.34■■□□□ 1.65
LMO4-204ENST00000495705 DDX46Q7L014 1031 aaKnown RBP25.34■■□□□ 1.65
LMO4-204ENST00000495705 C9orf78Q9NZ63 289 aaPredicted RBP25.34■■□□□ 1.65
LMO4-204ENST00000495705 CASP7P55210 303 aa25.33■■□□□ 1.65
LMO4-204ENST00000495705 SOGA3Q5TF21 947 aa25.33■■□□□ 1.65
LMO4-204ENST00000495705 PLA2G12BQ9BX93 195 aa25.33■■□□□ 1.65
LMO4-204ENST00000495705 ABCC4O15439 1325 aa25.33■■□□□ 1.64
LMO4-204ENST00000495705 CCDC152Q4G0S7 254 aa25.32■■□□□ 1.64
LMO4-204ENST00000495705 ZKSCAN2Q63HK3 967 aa25.32■■□□□ 1.64
LMO4-204ENST00000495705 TRIM27P14373 513 aa25.31■■□□□ 1.64
LMO4-204ENST00000495705 CTSWP56202 376 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms