RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 RSPH6AQ9H0K4 717 aa18.02■□□□□ 0.48
COL1A1-209ENST00000495677 PCDH10Q9P2E7 1040 aa18.02■□□□□ 0.48
COL1A1-209ENST00000495677 COL4A5P29400 1685 aa18.02■□□□□ 0.47
COL1A1-209ENST00000495677 RIC1Q4ADV7 1423 aa18.01■□□□□ 0.47
COL1A1-209ENST00000495677 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
COL1A1-209ENST00000495677 GTF2E1P29083 439 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-209ENST00000495677 SCNN1DP51172 638 aa18.01■□□□□ 0.47
COL1A1-209ENST00000495677 HLFQ16534 295 aa18.01■□□□□ 0.47
COL1A1-209ENST00000495677 CST9Q5W186 159 aa18.01■□□□□ 0.47
COL1A1-209ENST00000495677 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
COL1A1-209ENST00000495677 PRKAR2BP31323 418 aa18■□□□□ 0.47
COL1A1-209ENST00000495677 VPS33BQ9H267 617 aa18■□□□□ 0.47
COL1A1-209ENST00000495677 TLL2Q9Y6L7 1015 aa18■□□□□ 0.47
COL1A1-209ENST00000495677 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
COL1A1-209ENST00000495677 EPS15P42566 896 aa17.99■□□□□ 0.47
COL1A1-209ENST00000495677 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
COL1A1-209ENST00000495677 HHIPL1Q96JK4 782 aa17.99■□□□□ 0.47
COL1A1-209ENST00000495677 GJA3Q9Y6H8 435 aa17.99■□□□□ 0.47
COL1A1-209ENST00000495677 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
COL1A1-209ENST00000495677 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
COL1A1-209ENST00000495677 CRAMP1Q96RY5 1269 aa17.98■□□□□ 0.47
COL1A1-209ENST00000495677 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
COL1A1-209ENST00000495677 POLR2AP24928 1970 aaKnown RBP17.97■□□□□ 0.47
COL1A1-209ENST00000495677 IBTKQ9P2D0 1353 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-209ENST00000495677 CCDC85CA6NKD9 419 aa17.97■□□□□ 0.47
COL1A1-209ENST00000495677 CA12O43570 354 aa17.97■□□□□ 0.47
COL1A1-209ENST00000495677 FMR1Q06787 632 aaKnown RBP eCLIP17.97■□□□□ 0.47
COL1A1-209ENST00000495677 LARGE2Q8N3Y3 721 aa17.97■□□□□ 0.47
COL1A1-209ENST00000495677 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
COL1A1-209ENST00000495677 TAF7Q15545 349 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-209ENST00000495677 MCM10Q7L590 875 aa17.96■□□□□ 0.47
COL1A1-209ENST00000495677 PGAP2Q9UHJ9 254 aa17.96■□□□□ 0.47
COL1A1-209ENST00000495677 NUDCQ9Y266 331 aa17.96■□□□□ 0.47
COL1A1-209ENST00000495677 ABCC12Q96J65 1359 aa17.95■□□□□ 0.46
COL1A1-209ENST00000495677 SAPCD2Q86UD0 394 aa17.95■□□□□ 0.46
COL1A1-209ENST00000495677 NUTM1Q86Y26 1132 aa17.95■□□□□ 0.46
COL1A1-209ENST00000495677 RPGRQ92834 1020 aaKnown RBP17.95■□□□□ 0.46
COL1A1-209ENST00000495677 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
COL1A1-209ENST00000495677 ADARB2Q9NS39 739 aaKnown RBP17.95■□□□□ 0.46
COL1A1-209ENST00000495677 MAP3K15Q6ZN16 1313 aa17.95■□□□□ 0.46
COL1A1-209ENST00000495677 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
COL1A1-209ENST00000495677 GPRC5DQ9NZD1 345 aa17.94■□□□□ 0.46
COL1A1-209ENST00000495677 ANKRD36CQ5JPF3 1778 aa17.94■□□□□ 0.46
COL1A1-209ENST00000495677 TRAF5O00463 557 aa17.93■□□□□ 0.46
COL1A1-209ENST00000495677 PAXIP1Q6ZW49 1069 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-209ENST00000495677 NIM1KQ8IY84 436 aa17.93■□□□□ 0.46
COL1A1-209ENST00000495677 BRPF1P55201 1214 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-209ENST00000495677 ZC3H15Q8WU90 426 aaKnown RBP17.92■□□□□ 0.46
COL1A1-209ENST00000495677 PDE4DIPQ5VU43 2346 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 AOC2O75106 756 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 DCTN1Q14203 1278 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 SUSD4Q5VX71 490 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 ZNF34Q8IZ26 560 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 RTFDC1Q9BY42 306 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-209ENST00000495677 AKAP11Q9UKA4 1901 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 UBN2Q6ZU65 1347 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 CDHR2Q9BYE9 1310 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 LAMB2P55268 1798 aa17.91■□□□□ 0.46
COL1A1-209ENST00000495677 TNRC18O15417 2968 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-209ENST00000495677 PPEF1O14829 653 aaPredicted RBP17.9■□□□□ 0.46
COL1A1-209ENST00000495677 CXCL9Q07325 125 aa17.9■□□□□ 0.46
COL1A1-209ENST00000495677 PNISRQ8TF01 805 aaKnown RBP17.9■□□□□ 0.46
COL1A1-209ENST00000495677 MCOLN1Q9GZU1 580 aa17.9■□□□□ 0.46
COL1A1-209ENST00000495677 ZNRF3Q9ULT6 936 aa17.9■□□□□ 0.46
COL1A1-209ENST00000495677 ATP6V0A2Q9Y487 856 aa17.9■□□□□ 0.46
COL1A1-209ENST00000495677 PPIP5K2O43314 1243 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 CELF2O95319 508 aaKnown RBP17.89■□□□□ 0.45
COL1A1-209ENST00000495677 NTSR2O95665 410 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-209ENST00000495677 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
COL1A1-209ENST00000495677 GRM1Q13255 1194 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 SLC10A5Q5PT55 438 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 GIGYF2Q6Y7W6 1299 aaKnown RBP17.89■□□□□ 0.45
COL1A1-209ENST00000495677 SUPT20HQ8NEM7 779 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
COL1A1-209ENST00000495677 TMX4Q9H1E5 349 aaPredicted RBP17.89■□□□□ 0.45
COL1A1-209ENST00000495677 KIF6Q6ZMV9 814 aa17.88■□□□□ 0.45
COL1A1-209ENST00000495677 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
COL1A1-209ENST00000495677 PPP1R42Q7Z4L9 355 aa17.88■□□□□ 0.45
COL1A1-209ENST00000495677 TSKSQ9UJT2 592 aa17.88■□□□□ 0.45
COL1A1-209ENST00000495677 EIF4A1P60842 406 aaKnown RBP17.87■□□□□ 0.45
COL1A1-209ENST00000495677 AOC3Q16853 763 aa17.87■□□□□ 0.45
COL1A1-209ENST00000495677 PARP10Q53GL7 1025 aa17.87■□□□□ 0.45
COL1A1-209ENST00000495677 CDC37L1Q7L3B6 337 aa17.87■□□□□ 0.45
COL1A1-209ENST00000495677 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
COL1A1-209ENST00000495677 MIS18AQ9NYP9 233 aa17.87■□□□□ 0.45
COL1A1-209ENST00000495677 BBOX1O75936 387 aa17.86■□□□□ 0.45
COL1A1-209ENST00000495677 GPTP24298 496 aa17.86■□□□□ 0.45
COL1A1-209ENST00000495677 RRP7AQ9Y3A4 280 aaKnown RBP17.86■□□□□ 0.45
COL1A1-209ENST00000495677 ERBB4Q15303 1308 aa17.86■□□□□ 0.45
COL1A1-209ENST00000495677 TAF1P21675 1872 aa17.86■□□□□ 0.45
COL1A1-209ENST00000495677 HIRAP54198 1017 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-209ENST00000495677 NOGQ13253 232 aa17.85■□□□□ 0.45
COL1A1-209ENST00000495677 CIAPIN1Q6FI81 312 aa17.85■□□□□ 0.45
COL1A1-209ENST00000495677 SP8Q8IXZ3 490 aa17.85■□□□□ 0.45
COL1A1-209ENST00000495677 GLIS2Q9BZE0 524 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-209ENST00000495677 GMPSP49915 693 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-209ENST00000495677 KIAA2012Q0VF49 1180 aa17.84■□□□□ 0.45
COL1A1-209ENST00000495677 DGKZQ13574 1117 aa17.84■□□□□ 0.45
COL1A1-209ENST00000495677 TNIP1Q15025 636 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms