RNA–Protein interactions for RNA: ENST00000495465.6

RAPGEF3-214, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-214ENST00000495465 C3orf67Q6ZVT6 689 aa19.05■□□□□ 0.64
RAPGEF3-214ENST00000495465 POTECB2RU33 542 aa19.04■□□□□ 0.64
RAPGEF3-214ENST00000495465 TCERG1O14776 1098 aaKnown RBP19.04■□□□□ 0.64
RAPGEF3-214ENST00000495465 HSP90AB3PQ58FF7 597 aa19.04■□□□□ 0.64
RAPGEF3-214ENST00000495465 ZNF428Q96B54 188 aa19.04■□□□□ 0.64
RAPGEF3-214ENST00000495465 RBM17Q96I25 401 aaKnown RBP19.04■□□□□ 0.64
RAPGEF3-214ENST00000495465 FER1L6Q2WGJ9 1857 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 DDNO94850 711 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 HOXB7P09629 217 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 ZNF853P0CG23 659 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 HOXA10P31260 410 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 TCIRG1Q13488 830 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 SYNE4Q8N205 404 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 SMC1BQ8NDV3 1235 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 CCDC88AQ3V6T2 1871 aa19.03■□□□□ 0.64
RAPGEF3-214ENST00000495465 ELL2O00472 640 aaPredicted RBP19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 GNAI1P63096 354 aa19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 NLRP10Q86W26 655 aa19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 IFT57Q9NWB7 429 aa19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 CACNA1SQ13698 1873 aa19.02■□□□□ 0.64
RAPGEF3-214ENST00000495465 TNRC6CQ9HCJ0 1690 aaKnown RBP19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 HCLS1P14317 486 aaPredicted RBP19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 HTRA3P83110 453 aa19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 SLC10A5Q5PT55 438 aa19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 ANKRD13DQ6ZTN6 518 aa19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 CRAMP1Q96RY5 1269 aa19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 TRMT112Q9UI30 125 aaKnown RBP19.01■□□□□ 0.63
RAPGEF3-214ENST00000495465 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
RAPGEF3-214ENST00000495465 TIAM2Q8IVF5 1701 aa19■□□□□ 0.63
RAPGEF3-214ENST00000495465 SLC51AQ86UW1 340 aa19■□□□□ 0.63
RAPGEF3-214ENST00000495465 HYPKQ9NX55 129 aa19■□□□□ 0.63
RAPGEF3-214ENST00000495465 ARFGEF2Q9Y6D5 1785 aa18.99■□□□□ 0.63
RAPGEF3-214ENST00000495465 PPEF1O14829 653 aaPredicted RBP18.99■□□□□ 0.63
RAPGEF3-214ENST00000495465 IARSP41252 1262 aaKnown RBP18.99■□□□□ 0.63
RAPGEF3-214ENST00000495465 CC2D2BQ6DHV5 1058 aa18.99■□□□□ 0.63
RAPGEF3-214ENST00000495465 PLBD2Q8NHP8 589 aa18.99■□□□□ 0.63
RAPGEF3-214ENST00000495465 ATP5J2-PTCD1G3V325 749 aa18.98■□□□□ 0.63
RAPGEF3-214ENST00000495465 DNAJC5GQ8N7S2 189 aa18.98■□□□□ 0.63
RAPGEF3-214ENST00000495465 PSMD1Q99460 953 aa18.98■□□□□ 0.63
RAPGEF3-214ENST00000495465 C8orf58Q8NAV2 365 aa18.97■□□□□ 0.63
RAPGEF3-214ENST00000495465 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
RAPGEF3-214ENST00000495465 SH3TC1Q8TE82 1336 aa18.97■□□□□ 0.63
RAPGEF3-214ENST00000495465 ZNF541Q9H0D2 1346 aa18.97■□□□□ 0.63
RAPGEF3-214ENST00000495465 ANP32CO43423 234 aa18.96■□□□□ 0.63
RAPGEF3-214ENST00000495465 JDP2Q8WYK2 163 aa18.96■□□□□ 0.63
RAPGEF3-214ENST00000495465 TMX4Q9H1E5 349 aaPredicted RBP18.96■□□□□ 0.63
RAPGEF3-214ENST00000495465 MRS2Q9HD23 443 aa18.96■□□□□ 0.63
RAPGEF3-214ENST00000495465 ABCC4O15439 1325 aa18.96■□□□□ 0.63
RAPGEF3-214ENST00000495465 ISCA1Q9BUE6 129 aa18.95■□□□□ 0.62
RAPGEF3-214ENST00000495465 DICER1Q9UPY3 1922 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-214ENST00000495465 IQCA1LA6NCM1 817 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 FZD9O00144 591 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 POTEIP0CG38 1075 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 GRIPAP1Q4V328 841 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 RTL5Q5HYW3 569 aaPredicted RBP18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 DDX46Q7L014 1031 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 RIC3Q7Z5B4 369 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 FAM89AQ96GI7 184 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 PHAXQ9H814 394 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 ATP6V0A2Q9Y487 856 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 PCNTO95613 3336 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 WDR90Q96KV7 1748 aa18.94■□□□□ 0.62
RAPGEF3-214ENST00000495465 SNED1Q8TER0 1413 aa18.93■□□□□ 0.62
RAPGEF3-214ENST00000495465 GOLGA2Q08379 1002 aa18.93■□□□□ 0.62
RAPGEF3-214ENST00000495465 LARGE2Q8N3Y3 721 aa18.93■□□□□ 0.62
RAPGEF3-214ENST00000495465 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
RAPGEF3-214ENST00000495465 L3MBTL3Q96JM7 780 aaPredicted RBP18.93■□□□□ 0.62
RAPGEF3-214ENST00000495465 BBOX1O75936 387 aa18.92■□□□□ 0.62
RAPGEF3-214ENST00000495465 CHADLQ6NUI6 762 aa18.92■□□□□ 0.62
RAPGEF3-214ENST00000495465 TSPYL6Q8N831 410 aa18.92■□□□□ 0.62
RAPGEF3-214ENST00000495465 TAF1DQ9H5J8 278 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-214ENST00000495465 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
RAPGEF3-214ENST00000495465 EIF6P56537 245 aaKnown RBP18.91■□□□□ 0.62
RAPGEF3-214ENST00000495465 CCDC30Q5VVM6 783 aa18.91■□□□□ 0.62
RAPGEF3-214ENST00000495465 WWC1Q8IX03 1113 aa18.91■□□□□ 0.62
RAPGEF3-214ENST00000495465 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
RAPGEF3-214ENST00000495465 PPIP5K2O43314 1243 aa18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 TRIM28Q13263 835 aaKnown RBP18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 GRAPQ13588 217 aa18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 EAPPQ56P03 285 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 GPC2Q8N158 579 aa18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 KLRG1Q96E93 195 aa18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 MYD88Q99836 296 aa18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 SALL2Q9Y467 1007 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF3-214ENST00000495465 AOC3Q16853 763 aa18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 DPP8Q6V1X1 898 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 SP8Q8IXZ3 490 aa18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 NIM1KQ8IY84 436 aa18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 CHMP4AQ9BY43 222 aa18.89■□□□□ 0.61
RAPGEF3-214ENST00000495465 IRS4O14654 1257 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF3-214ENST00000495465 EPHX2P34913 555 aa18.88■□□□□ 0.61
RAPGEF3-214ENST00000495465 LDHDQ86WU2 507 aa18.88■□□□□ 0.61
RAPGEF3-214ENST00000495465 MPNDQ8N594 471 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms