RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 CALD1Q05682 793 aaKnown RBP18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 UTP14AQ9BVJ6 771 aaKnown RBP18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 MRS2Q9HD23 443 aa18.52■□□□□ 0.56
RPRD1B-206ENST00000495457 ARFGEF2Q9Y6D5 1785 aa18.52■□□□□ 0.55
RPRD1B-206ENST00000495457 TCIRG1Q13488 830 aa18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 HSP90AB3PQ58FF7 597 aa18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 NLRP10Q86W26 655 aa18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 C16orf71Q8IYS4 520 aaPredicted RBP18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 RPGRQ92834 1020 aaKnown RBP18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 DBF4Q9UBU7 674 aaPredicted RBP18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 TIAM2Q8IVF5 1701 aa18.51■□□□□ 0.55
RPRD1B-206ENST00000495457 SLC51AQ86UW1 340 aa18.5■□□□□ 0.55
RPRD1B-206ENST00000495457 HOXA10P31260 410 aaPredicted RBP18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 FKBP4Q02790 459 aaKnown RBP eCLIP18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 SYNE4Q8N205 404 aa18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 C8orf58Q8NAV2 365 aa18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 PLBD2Q8NHP8 589 aa18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 RBM46Q8TBY0 533 aaKnown RBP18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 ZNF277Q9NRM2 450 aaPredicted RBP18.49■□□□□ 0.55
RPRD1B-206ENST00000495457 SLC10A5Q5PT55 438 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 ANKRD13DQ6ZTN6 518 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 SNED1Q8TER0 1413 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 CCDC88AQ3V6T2 1871 aa18.48■□□□□ 0.55
RPRD1B-206ENST00000495457 POTECB2RU33 542 aa18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 HCLS1P14317 486 aaPredicted RBP18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 DPY19L2Q6NUT2 758 aa18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 RTKN2Q8IZC4 609 aa18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 RBM17Q96I25 401 aaKnown RBP18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 CRAMP1Q96RY5 1269 aa18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 TRMT112Q9UI30 125 aaKnown RBP18.47■□□□□ 0.55
RPRD1B-206ENST00000495457 CEP350Q5VT06 3117 aa18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 DDNO94850 711 aaPredicted RBP18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 VEGFAP15692 232 aaPredicted RBP18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 WWC1Q8IX03 1113 aa18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 TSPYL6Q8N831 410 aa18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 TSR2Q969E8 191 aaKnown RBP18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 PHAXQ9H814 394 aaKnown RBP18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 RNF123Q5XPI4 1314 aa18.46■□□□□ 0.55
RPRD1B-206ENST00000495457 ATP5J2-PTCD1G3V325 749 aa18.45■□□□□ 0.54
RPRD1B-206ENST00000495457 PPEF1O14829 653 aaPredicted RBP18.45■□□□□ 0.54
RPRD1B-206ENST00000495457 ISCA1Q9BUE6 129 aa18.45■□□□□ 0.54
RPRD1B-206ENST00000495457 SH3TC1Q8TE82 1336 aa18.45■□□□□ 0.54
RPRD1B-206ENST00000495457 ANKRD36CQ5JPF3 1778 aa18.44■□□□□ 0.54
RPRD1B-206ENST00000495457 ABCC4O15439 1325 aa18.44■□□□□ 0.54
RPRD1B-206ENST00000495457 IARSP41252 1262 aaKnown RBP18.43■□□□□ 0.54
RPRD1B-206ENST00000495457 FSTL1Q12841 308 aa18.43■□□□□ 0.54
RPRD1B-206ENST00000495457 CC2D2BQ6DHV5 1058 aa18.43■□□□□ 0.54
RPRD1B-206ENST00000495457 PSMD1Q99460 953 aa18.43■□□□□ 0.54
RPRD1B-206ENST00000495457 SALL2Q9Y467 1007 aaPredicted RBP18.43■□□□□ 0.54
RPRD1B-206ENST00000495457 RIC3Q7Z5B4 369 aa18.42■□□□□ 0.54
RPRD1B-206ENST00000495457 FAM89AQ96GI7 184 aa18.42■□□□□ 0.54
RPRD1B-206ENST00000495457 DICER1Q9UPY3 1922 aaKnown RBP18.42■□□□□ 0.54
RPRD1B-206ENST00000495457 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
RPRD1B-206ENST00000495457 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 APLP1P51693 650 aa18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 GOLGA2Q08379 1002 aa18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 RTL5Q5HYW3 569 aaPredicted RBP18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 CCDC30Q5VVM6 783 aa18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
RPRD1B-206ENST00000495457 HTRA3P83110 453 aa18.4■□□□□ 0.54
RPRD1B-206ENST00000495457 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
RPRD1B-206ENST00000495457 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
RPRD1B-206ENST00000495457 MYD88Q99836 296 aa18.39■□□□□ 0.53
RPRD1B-206ENST00000495457 ATP6V0A2Q9Y487 856 aa18.39■□□□□ 0.53
RPRD1B-206ENST00000495457 COL4A5P29400 1685 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 FZD9O00144 591 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 POTEIP0CG38 1075 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 POTEJP0CG39 1038 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 DDX46Q7L014 1031 aaKnown RBP18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 FAM9BQ8IZU0 186 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 IL16Q14005 1332 aa18.38■□□□□ 0.53
RPRD1B-206ENST00000495457 BBOX1O75936 387 aa18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 GRAPQ13588 217 aa18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 TWISTNBQ3B726 338 aaPredicted RBP18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 GRIPAP1Q4V328 841 aa18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 GRAPLQ8TC17 118 aaPredicted RBP18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 L3MBTL3Q96JM7 780 aaPredicted RBP18.37■□□□□ 0.53
RPRD1B-206ENST00000495457 IRS4O14654 1257 aaPredicted RBP18.36■□□□□ 0.53
RPRD1B-206ENST00000495457 LAMB2P55268 1798 aa18.36■□□□□ 0.53
RPRD1B-206ENST00000495457 LARGE2Q8N3Y3 721 aa18.36■□□□□ 0.53
RPRD1B-206ENST00000495457 TMX4Q9H1E5 349 aaPredicted RBP18.36■□□□□ 0.53
RPRD1B-206ENST00000495457 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
RPRD1B-206ENST00000495457 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 SP8Q8IXZ3 490 aa18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 DNAJC5GQ8N7S2 189 aa18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 JARID2Q92833 1246 aaPredicted RBP18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 METTL22Q9BUU2 404 aaPredicted RBP18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 MAP3K2Q9Y2U5 619 aa18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 DDX60Q8IY21 1712 aaKnown RBP18.35■□□□□ 0.53
RPRD1B-206ENST00000495457 IQCA1LA6NCM1 817 aa18.34■□□□□ 0.53
RPRD1B-206ENST00000495457 PPIP5K2O43314 1243 aa18.34■□□□□ 0.53
RPRD1B-206ENST00000495457 DDX58O95786 925 aaKnown RBP18.34■□□□□ 0.53
RPRD1B-206ENST00000495457 AOC3Q16853 763 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms