RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
CTNS-207ENST00000495445 LTBP3Q9NS15 1303 aa22.38■■□□□ 1.17
CTNS-207ENST00000495445 ZNF526Q8TF50 670 aaPredicted RBP22.38■■□□□ 1.17
CTNS-207ENST00000495445 FER1L6Q2WGJ9 1857 aa22.37■■□□□ 1.17
CTNS-207ENST00000495445 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
CTNS-207ENST00000495445 TSR2Q969E8 191 aaKnown RBP22.37■■□□□ 1.17
CTNS-207ENST00000495445 CHMP4AQ9BY43 222 aa22.37■■□□□ 1.17
CTNS-207ENST00000495445 ZNF219Q9P2Y4 722 aaPredicted RBP22.37■■□□□ 1.17
CTNS-207ENST00000495445 RNF123Q5XPI4 1314 aa22.36■■□□□ 1.17
CTNS-207ENST00000495445 ZC3H4Q9UPT8 1303 aaKnown RBP22.36■■□□□ 1.17
CTNS-207ENST00000495445 KIF3CO14782 793 aa22.36■■□□□ 1.17
CTNS-207ENST00000495445 FAM9BQ8IZU0 186 aa22.36■■□□□ 1.17
CTNS-207ENST00000495445 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
CTNS-207ENST00000495445 TNRC6CQ9HCJ0 1690 aaKnown RBP22.36■■□□□ 1.17
CTNS-207ENST00000495445 TRIM28Q13263 835 aaKnown RBP22.35■■□□□ 1.17
CTNS-207ENST00000495445 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
CTNS-207ENST00000495445 CCDC30Q5VVM6 783 aa22.34■■□□□ 1.17
CTNS-207ENST00000495445 C3orf67Q6ZVT6 689 aa22.34■■□□□ 1.17
CTNS-207ENST00000495445 ANKRD36CQ5JPF3 1778 aa22.34■■□□□ 1.17
CTNS-207ENST00000495445 SYNE4Q8N205 404 aa22.33■■□□□ 1.17
CTNS-207ENST00000495445 NLRP3Q96P20 1036 aa22.33■■□□□ 1.17
CTNS-207ENST00000495445 CRAMP1Q96RY5 1269 aa22.33■■□□□ 1.17
CTNS-207ENST00000495445 CCDC88AQ3V6T2 1871 aa22.32■■□□□ 1.16
CTNS-207ENST00000495445 TAOK3Q9H2K8 898 aa22.32■■□□□ 1.16
CTNS-207ENST00000495445 TRMT112Q9UI30 125 aaKnown RBP22.32■■□□□ 1.16
CTNS-207ENST00000495445 CACNA1SQ13698 1873 aa22.31■■□□□ 1.16
CTNS-207ENST00000495445 CCDC93Q567U6 631 aa22.31■■□□□ 1.16
CTNS-207ENST00000495445 SALL2Q9Y467 1007 aaPredicted RBP22.31■■□□□ 1.16
CTNS-207ENST00000495445 TWISTNBQ3B726 338 aaPredicted RBP22.3■■□□□ 1.16
CTNS-207ENST00000495445 OLFM4Q6UX06 510 aa22.3■■□□□ 1.16
CTNS-207ENST00000495445 RTKN2Q8IZC4 609 aa22.3■■□□□ 1.16
CTNS-207ENST00000495445 RPGRQ92834 1020 aaKnown RBP22.3■■□□□ 1.16
CTNS-207ENST00000495445 RBM17Q96I25 401 aaKnown RBP22.3■■□□□ 1.16
CTNS-207ENST00000495445 NMRK2Q9NPI5 230 aa22.3■■□□□ 1.16
CTNS-207ENST00000495445 SNED1Q8TER0 1413 aa22.3■■□□□ 1.16
CTNS-207ENST00000495445 GLTPD2A6NH11 291 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 ATP5J2-PTCD1G3V325 749 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 SPINK5Q9NQ38 1064 aaPredicted RBP22.29■■□□□ 1.16
CTNS-207ENST00000495445 DICER1Q9UPY3 1922 aaKnown RBP22.29■■□□□ 1.16
CTNS-207ENST00000495445 KDM2BQ8NHM5 1336 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 SH3TC1Q8TE82 1336 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 FANCIQ9NVI1 1328 aa22.29■■□□□ 1.16
CTNS-207ENST00000495445 HCLS1P14317 486 aaPredicted RBP22.28■■□□□ 1.16
CTNS-207ENST00000495445 FKBP4Q02790 459 aaKnown RBP eCLIP22.28■■□□□ 1.16
CTNS-207ENST00000495445 CC2D2BQ6DHV5 1058 aa22.28■■□□□ 1.16
CTNS-207ENST00000495445 GOLGA2Q08379 1002 aa22.27■■□□□ 1.16
CTNS-207ENST00000495445 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
CTNS-207ENST00000495445 VAMP4O75379 141 aa22.26■■□□□ 1.15
CTNS-207ENST00000495445 GRIPAP1Q4V328 841 aa22.25■■□□□ 1.15
CTNS-207ENST00000495445 FAM89AQ96GI7 184 aa22.25■■□□□ 1.15
CTNS-207ENST00000495445 PSMD1Q99460 953 aa22.25■■□□□ 1.15
CTNS-207ENST00000495445 METTL22Q9BUU2 404 aaPredicted RBP22.25■■□□□ 1.15
CTNS-207ENST00000495445 RRAGCQ9HB90 399 aa22.25■■□□□ 1.15
CTNS-207ENST00000495445 CEP350Q5VT06 3117 aa22.25■■□□□ 1.15
CTNS-207ENST00000495445 TOMM70O94826 608 aa22.24■■□□□ 1.15
CTNS-207ENST00000495445 DDX58O95786 925 aaKnown RBP22.24■■□□□ 1.15
CTNS-207ENST00000495445 KSR2Q6VAB6 950 aa22.24■■□□□ 1.15
CTNS-207ENST00000495445 STK31Q9BXU1 1019 aa22.24■■□□□ 1.15
CTNS-207ENST00000495445 BBOX1O75936 387 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 SLC4A2P04920 1241 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 EXOSC9Q06265 439 aaKnown RBP22.23■■□□□ 1.15
CTNS-207ENST00000495445 SF3B3Q15393 1217 aaKnown RBP22.23■■□□□ 1.15
CTNS-207ENST00000495445 G2E3Q7L622 706 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 ZNF428Q96B54 188 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 MYD88Q99836 296 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 ABCC4O15439 1325 aa22.23■■□□□ 1.15
CTNS-207ENST00000495445 LAMB2P55268 1798 aa22.22■■□□□ 1.15
CTNS-207ENST00000495445 POTECB2RU33 542 aa22.22■■□□□ 1.15
CTNS-207ENST00000495445 CCER2I3L3R5 266 aa22.22■■□□□ 1.15
CTNS-207ENST00000495445 TCERG1O14776 1098 aaKnown RBP22.22■■□□□ 1.15
CTNS-207ENST00000495445 PPEF1O14829 653 aaPredicted RBP22.22■■□□□ 1.15
CTNS-207ENST00000495445 DPY19L2Q6NUT2 758 aa22.22■■□□□ 1.15
CTNS-207ENST00000495445 ZBTB38Q8NAP3 1195 aaPredicted RBP22.22■■□□□ 1.15
CTNS-207ENST00000495445 ZNF277Q9NRM2 450 aaPredicted RBP22.22■■□□□ 1.15
CTNS-207ENST00000495445 ATP6V0A2Q9Y487 856 aa22.22■■□□□ 1.15
CTNS-207ENST00000495445 TIAM2Q8IVF5 1701 aa22.21■■□□□ 1.15
CTNS-207ENST00000495445 PI4KAP2A4QPH2 592 aa22.21■■□□□ 1.15
CTNS-207ENST00000495445 SLC51AQ86UW1 340 aa22.21■■□□□ 1.15
CTNS-207ENST00000495445 PI4KAP1Q8N8J0 262 aa22.21■■□□□ 1.15
CTNS-207ENST00000495445 MAP3K2Q9Y2U5 619 aa22.21■■□□□ 1.15
CTNS-207ENST00000495445 DDX46Q7L014 1031 aaKnown RBP22.2■■□□□ 1.14
CTNS-207ENST00000495445 SP8Q8IXZ3 490 aa22.2■■□□□ 1.14
CTNS-207ENST00000495445 MYH16Q9H6N6 1097 aa22.2■■□□□ 1.14
CTNS-207ENST00000495445 DDX60Q8IY21 1712 aaKnown RBP22.2■■□□□ 1.14
CTNS-207ENST00000495445 IRS4O14654 1257 aaPredicted RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 PCCAP05165 728 aaPredicted RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 IGKV5-2P06315 115 aa22.19■■□□□ 1.14
CTNS-207ENST00000495445 VEGFAP15692 232 aaPredicted RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 IARSP41252 1262 aaKnown RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 GRAPQ13588 217 aa22.19■■□□□ 1.14
CTNS-207ENST00000495445 RBM46Q8TBY0 533 aaKnown RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 GRAPLQ8TC17 118 aaPredicted RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 CWC25Q9NXE8 425 aaPredicted RBP22.19■■□□□ 1.14
CTNS-207ENST00000495445 FZD9O00144 591 aa22.17■■□□□ 1.14
CTNS-207ENST00000495445 FLIIQ13045 1269 aa22.17■■□□□ 1.14
CTNS-207ENST00000495445 RTL5Q5HYW3 569 aaPredicted RBP22.17■■□□□ 1.14
CTNS-207ENST00000495445 RTFDC1Q9BY42 306 aaPredicted RBP22.17■■□□□ 1.14
CTNS-207ENST00000495445 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms