RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 UTP14AQ9BVJ6 771 aaKnown RBP18.15■□□□□ 0.5
MRPL55-232ENST00000495434 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
MRPL55-232ENST00000495434 SLC10A5Q5PT55 438 aa18.14■□□□□ 0.49
MRPL55-232ENST00000495434 C8orf58Q8NAV2 365 aa18.14■□□□□ 0.49
MRPL55-232ENST00000495434 TNRC6CQ9HCJ0 1690 aaKnown RBP18.13■□□□□ 0.49
MRPL55-232ENST00000495434 HOXA10P31260 410 aaPredicted RBP18.13■□□□□ 0.49
MRPL55-232ENST00000495434 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
MRPL55-232ENST00000495434 NLRP10Q86W26 655 aa18.13■□□□□ 0.49
MRPL55-232ENST00000495434 WDR63Q8IWG1 891 aa18.13■□□□□ 0.49
MRPL55-232ENST00000495434 DICER1Q9UPY3 1922 aaKnown RBP18.12■□□□□ 0.49
MRPL55-232ENST00000495434 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-232ENST00000495434 PRELPP51888 382 aa18.12■□□□□ 0.49
MRPL55-232ENST00000495434 NLRP3Q96P20 1036 aa18.12■□□□□ 0.49
MRPL55-232ENST00000495434 TAOK3Q9H2K8 898 aa18.12■□□□□ 0.49
MRPL55-232ENST00000495434 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
MRPL55-232ENST00000495434 KDM2BQ8NHM5 1336 aa18.12■□□□□ 0.49
MRPL55-232ENST00000495434 KIF3CO14782 793 aa18.11■□□□□ 0.49
MRPL55-232ENST00000495434 CCDC93Q567U6 631 aa18.11■□□□□ 0.49
MRPL55-232ENST00000495434 RPGRQ92834 1020 aaKnown RBP18.11■□□□□ 0.49
MRPL55-232ENST00000495434 CRAMP1Q96RY5 1269 aa18.11■□□□□ 0.49
MRPL55-232ENST00000495434 TRIM28Q13263 835 aaKnown RBP18.1■□□□□ 0.49
MRPL55-232ENST00000495434 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
MRPL55-232ENST00000495434 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
MRPL55-232ENST00000495434 TSPYL6Q8N831 410 aa18.1■□□□□ 0.49
MRPL55-232ENST00000495434 TSR2Q969E8 191 aaKnown RBP18.1■□□□□ 0.49
MRPL55-232ENST00000495434 ISCA1Q9BUE6 129 aa18.1■□□□□ 0.49
MRPL55-232ENST00000495434 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
MRPL55-232ENST00000495434 GOLGA2Q08379 1002 aa18.09■□□□□ 0.49
MRPL55-232ENST00000495434 GRIPAP1Q4V328 841 aa18.09■□□□□ 0.49
MRPL55-232ENST00000495434 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
MRPL55-232ENST00000495434 RBM17Q96I25 401 aaKnown RBP18.09■□□□□ 0.49
MRPL55-232ENST00000495434 TRMT112Q9UI30 125 aaKnown RBP18.09■□□□□ 0.49
MRPL55-232ENST00000495434 GLTPD2A6NH11 291 aa18.08■□□□□ 0.48
MRPL55-232ENST00000495434 FKBP4Q02790 459 aaKnown RBP eCLIP18.08■□□□□ 0.48
MRPL55-232ENST00000495434 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.48
MRPL55-232ENST00000495434 TIAM2Q8IVF5 1701 aa18.08■□□□□ 0.48
MRPL55-232ENST00000495434 SENP3-EIF4A1A0A087X0R7 540 aa18.07■□□□□ 0.48
MRPL55-232ENST00000495434 TWISTNBQ3B726 338 aaPredicted RBP18.07■□□□□ 0.48
MRPL55-232ENST00000495434 RIC3Q7Z5B4 369 aa18.07■□□□□ 0.48
MRPL55-232ENST00000495434 NMRK2Q9NPI5 230 aa18.07■□□□□ 0.48
MRPL55-232ENST00000495434 DDX58O95786 925 aaKnown RBP18.06■□□□□ 0.48
MRPL55-232ENST00000495434 C3orf67Q6ZVT6 689 aa18.06■□□□□ 0.48
MRPL55-232ENST00000495434 STK31Q9BXU1 1019 aa18.06■□□□□ 0.48
MRPL55-232ENST00000495434 CACNA1FO60840 1977 aa18.06■□□□□ 0.48
MRPL55-232ENST00000495434 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
MRPL55-232ENST00000495434 TOMM70O94826 608 aa18.05■□□□□ 0.48
MRPL55-232ENST00000495434 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
MRPL55-232ENST00000495434 PSMD1Q99460 953 aa18.05■□□□□ 0.48
MRPL55-232ENST00000495434 SALL2Q9Y467 1007 aaPredicted RBP18.05■□□□□ 0.48
MRPL55-232ENST00000495434 SNED1Q8TER0 1413 aa18.05■□□□□ 0.48
MRPL55-232ENST00000495434 LAMB2P55268 1798 aa18.04■□□□□ 0.48
MRPL55-232ENST00000495434 ATP5J2-PTCD1G3V325 749 aa18.04■□□□□ 0.48
MRPL55-232ENST00000495434 SYNE4Q8N205 404 aa18.04■□□□□ 0.48
MRPL55-232ENST00000495434 PPEF1O14829 653 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-232ENST00000495434 BBOX1O75936 387 aa18.03■□□□□ 0.48
MRPL55-232ENST00000495434 HCLS1P14317 486 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-232ENST00000495434 OLFM4Q6UX06 510 aa18.03■□□□□ 0.48
MRPL55-232ENST00000495434 CCDC191Q8NCU4 936 aa18.03■□□□□ 0.48
MRPL55-232ENST00000495434 METTL22Q9BUU2 404 aaPredicted RBP18.03■□□□□ 0.48
MRPL55-232ENST00000495434 HSP90B1P14625 803 aaKnown RBP18.02■□□□□ 0.48
MRPL55-232ENST00000495434 KSR2Q6VAB6 950 aa18.02■□□□□ 0.48
MRPL55-232ENST00000495434 ZBTB38Q8NAP3 1195 aaPredicted RBP18.02■□□□□ 0.48
MRPL55-232ENST00000495434 FAM89AQ96GI7 184 aa18.02■□□□□ 0.48
MRPL55-232ENST00000495434 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
MRPL55-232ENST00000495434 RRAGCQ9HB90 399 aa18.02■□□□□ 0.48
MRPL55-232ENST00000495434 ABCC4O15439 1325 aa18.01■□□□□ 0.47
MRPL55-232ENST00000495434 DDX60Q8IY21 1712 aaKnown RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 VAMP4O75379 141 aa18.01■□□□□ 0.47
MRPL55-232ENST00000495434 VEGFAP15692 232 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 SF3B3Q15393 1217 aaKnown RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 DDX46Q7L014 1031 aaKnown RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 RBM46Q8TBY0 533 aaKnown RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 TMX4Q9H1E5 349 aaPredicted RBP18.01■□□□□ 0.47
MRPL55-232ENST00000495434 ATP6V0A2Q9Y487 856 aa18.01■□□□□ 0.47
MRPL55-232ENST00000495434 WDR90Q96KV7 1748 aa18.01■□□□□ 0.47
MRPL55-232ENST00000495434 ZNF521Q96K83 1311 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 CCER2I3L3R5 266 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 SLC4A2P04920 1241 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 IARSP41252 1262 aaKnown RBP18■□□□□ 0.47
MRPL55-232ENST00000495434 TMC4Q7Z404 712 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 MYD88Q99836 296 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 ZNF277Q9NRM2 450 aaPredicted RBP18■□□□□ 0.47
MRPL55-232ENST00000495434 MAP3K2Q9Y2U5 619 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 CEP350Q5VT06 3117 aa18■□□□□ 0.47
MRPL55-232ENST00000495434 PI4KAP2A4QPH2 592 aa17.99■□□□□ 0.47
MRPL55-232ENST00000495434 IRS4O14654 1257 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 PCCAP05165 728 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 GRAPQ13588 217 aa17.99■□□□□ 0.47
MRPL55-232ENST00000495434 SP8Q8IXZ3 490 aa17.99■□□□□ 0.47
MRPL55-232ENST00000495434 PI4KAP1Q8N8J0 262 aa17.99■□□□□ 0.47
MRPL55-232ENST00000495434 GRAPLQ8TC17 118 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 VPS33BQ9H267 617 aa17.99■□□□□ 0.47
MRPL55-232ENST00000495434 SPINK5Q9NQ38 1064 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 CWC25Q9NXE8 425 aaPredicted RBP17.99■□□□□ 0.47
MRPL55-232ENST00000495434 HSPA6P17066 643 aa17.98■□□□□ 0.47
MRPL55-232ENST00000495434 FZD9O00144 591 aa17.97■□□□□ 0.47
MRPL55-232ENST00000495434 NEXNQ0ZGT2 675 aa17.97■□□□□ 0.47
MRPL55-232ENST00000495434 FSTL1Q12841 308 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms