RNA–Protein interactions for RNA: ENST00000495360.5

APTX-232, Transcript of aprataxin, humanhuman

TSL 5

Gene APTX, Length 1,313 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-232ENST00000495360 DUSP27Q5VZP5 1158 aa22.49■■□□□ 1.19
APTX-232ENST00000495360 IFT57Q9NWB7 429 aa22.49■■□□□ 1.19
APTX-232ENST00000495360 HSP90AB3PQ58FF7 597 aa22.48■■□□□ 1.19
APTX-232ENST00000495360 OLFM4Q6UX06 510 aa22.48■■□□□ 1.19
APTX-232ENST00000495360 UTP14AQ9BVJ6 771 aaKnown RBP22.48■■□□□ 1.19
APTX-232ENST00000495360 ANKRD36CQ5JPF3 1778 aa22.47■■□□□ 1.19
APTX-232ENST00000495360 GNAI1P63096 354 aa22.47■■□□□ 1.19
APTX-232ENST00000495360 FKBP4Q02790 459 aaKnown RBP eCLIP22.47■■□□□ 1.19
APTX-232ENST00000495360 DPY19L2Q6NUT2 758 aa22.47■■□□□ 1.19
APTX-232ENST00000495360 DBF4Q9UBU7 674 aaPredicted RBP22.47■■□□□ 1.19
APTX-232ENST00000495360 DICER1Q9UPY3 1922 aaKnown RBP22.46■■□□□ 1.19
APTX-232ENST00000495360 RTKN2Q8IZC4 609 aa22.46■■□□□ 1.19
APTX-232ENST00000495360 ANP32CO43423 234 aa22.45■■□□□ 1.18
APTX-232ENST00000495360 VEGFAP15692 232 aaPredicted RBP22.45■■□□□ 1.18
APTX-232ENST00000495360 HOXA10P31260 410 aaPredicted RBP22.45■■□□□ 1.18
APTX-232ENST00000495360 RBM17Q96I25 401 aaKnown RBP22.45■■□□□ 1.18
APTX-232ENST00000495360 RNF123Q5XPI4 1314 aa22.45■■□□□ 1.18
APTX-232ENST00000495360 TCIRG1Q13488 830 aa22.44■■□□□ 1.18
APTX-232ENST00000495360 C3orf67Q6ZVT6 689 aa22.44■■□□□ 1.18
APTX-232ENST00000495360 NLRP10Q86W26 655 aa22.44■■□□□ 1.18
APTX-232ENST00000495360 NLRP3Q96P20 1036 aa22.44■■□□□ 1.18
APTX-232ENST00000495360 WDR90Q96KV7 1748 aa22.43■■□□□ 1.18
APTX-232ENST00000495360 FSTL1Q12841 308 aa22.43■■□□□ 1.18
APTX-232ENST00000495360 PLBD2Q8NHP8 589 aa22.43■■□□□ 1.18
APTX-232ENST00000495360 MRS2Q9HD23 443 aa22.43■■□□□ 1.18
APTX-232ENST00000495360 ZNF277Q9NRM2 450 aaPredicted RBP22.43■■□□□ 1.18
APTX-232ENST00000495360 HYPKQ9NX55 129 aa22.43■■□□□ 1.18
APTX-232ENST00000495360 APLP1P51693 650 aa22.42■■□□□ 1.18
APTX-232ENST00000495360 SLC10A5Q5PT55 438 aa22.42■■□□□ 1.18
APTX-232ENST00000495360 CRAMP1Q96RY5 1269 aa22.42■■□□□ 1.18
APTX-232ENST00000495360 ELL2O00472 640 aaPredicted RBP22.41■■□□□ 1.18
APTX-232ENST00000495360 CC2D2BQ6DHV5 1058 aa22.41■■□□□ 1.18
APTX-232ENST00000495360 ANKRD13DQ6ZTN6 518 aa22.41■■□□□ 1.18
APTX-232ENST00000495360 SNED1Q8TER0 1413 aa22.41■■□□□ 1.18
APTX-232ENST00000495360 TRMT112Q9UI30 125 aaKnown RBP22.41■■□□□ 1.18
APTX-232ENST00000495360 PPEF1O14829 653 aaPredicted RBP22.4■■□□□ 1.18
APTX-232ENST00000495360 SYNE4Q8N205 404 aa22.4■■□□□ 1.18
APTX-232ENST00000495360 SMC1BQ8NDV3 1235 aa22.4■■□□□ 1.18
APTX-232ENST00000495360 SH3TC1Q8TE82 1336 aa22.4■■□□□ 1.18
APTX-232ENST00000495360 POTECB2RU33 542 aa22.39■■□□□ 1.18
APTX-232ENST00000495360 DDNO94850 711 aaPredicted RBP22.39■■□□□ 1.18
APTX-232ENST00000495360 HCLS1P14317 486 aaPredicted RBP22.39■■□□□ 1.18
APTX-232ENST00000495360 IARSP41252 1262 aaKnown RBP22.39■■□□□ 1.18
APTX-232ENST00000495360 PSMD1Q99460 953 aa22.39■■□□□ 1.18
APTX-232ENST00000495360 TCERG1O14776 1098 aaKnown RBP22.38■■□□□ 1.17
APTX-232ENST00000495360 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
APTX-232ENST00000495360 ZNF428Q96B54 188 aa22.38■■□□□ 1.17
APTX-232ENST00000495360 CCDC27Q2M243 656 aa22.37■■□□□ 1.17
APTX-232ENST00000495360 GRIPAP1Q4V328 841 aa22.36■■□□□ 1.17
APTX-232ENST00000495360 SLC51AQ86UW1 340 aa22.36■■□□□ 1.17
APTX-232ENST00000495360 ISCA1Q9BUE6 129 aa22.36■■□□□ 1.17
APTX-232ENST00000495360 ABCC4O15439 1325 aa22.36■■□□□ 1.17
APTX-232ENST00000495360 LAMB2P55268 1798 aa22.36■■□□□ 1.17
APTX-232ENST00000495360 ATP5J2-PTCD1G3V325 749 aa22.35■■□□□ 1.17
APTX-232ENST00000495360 GOLGA2Q08379 1002 aa22.35■■□□□ 1.17
APTX-232ENST00000495360 WWC1Q8IX03 1113 aa22.35■■□□□ 1.17
APTX-232ENST00000495360 TSR2Q969E8 191 aaKnown RBP22.35■■□□□ 1.17
APTX-232ENST00000495360 PHAXQ9H814 394 aaKnown RBP22.35■■□□□ 1.17
APTX-232ENST00000495360 ZNF541Q9H0D2 1346 aa22.35■■□□□ 1.17
APTX-232ENST00000495360 RIC3Q7Z5B4 369 aa22.34■■□□□ 1.17
APTX-232ENST00000495360 TMX4Q9H1E5 349 aaPredicted RBP22.34■■□□□ 1.17
APTX-232ENST00000495360 CCDC30Q5VVM6 783 aa22.33■■□□□ 1.17
APTX-232ENST00000495360 TSPYL6Q8N831 410 aa22.33■■□□□ 1.17
APTX-232ENST00000495360 JDP2Q8WYK2 163 aa22.33■■□□□ 1.17
APTX-232ENST00000495360 CHMP4AQ9BY43 222 aa22.33■■□□□ 1.17
APTX-232ENST00000495360 ATP6V0A2Q9Y487 856 aa22.33■■□□□ 1.17
APTX-232ENST00000495360 IQCA1LA6NCM1 817 aa22.32■■□□□ 1.16
APTX-232ENST00000495360 DDX46Q7L014 1031 aaKnown RBP22.32■■□□□ 1.16
APTX-232ENST00000495360 FAM89AQ96GI7 184 aa22.32■■□□□ 1.16
APTX-232ENST00000495360 L3MBTL3Q96JM7 780 aaPredicted RBP22.32■■□□□ 1.16
APTX-232ENST00000495360 FZD9O00144 591 aa22.31■■□□□ 1.16
APTX-232ENST00000495360 DDX60Q8IY21 1712 aaKnown RBP22.31■■□□□ 1.16
APTX-232ENST00000495360 BBOX1O75936 387 aa22.31■■□□□ 1.16
APTX-232ENST00000495360 TRIM28Q13263 835 aaKnown RBP22.31■■□□□ 1.16
APTX-232ENST00000495360 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
APTX-232ENST00000495360 LARGE2Q8N3Y3 721 aa22.31■■□□□ 1.16
APTX-232ENST00000495360 COL4A5P29400 1685 aa22.3■■□□□ 1.16
APTX-232ENST00000495360 IL16Q14005 1332 aa22.3■■□□□ 1.16
APTX-232ENST00000495360 HTRA3P83110 453 aa22.3■■□□□ 1.16
APTX-232ENST00000495360 GRAPQ13588 217 aa22.3■■□□□ 1.16
APTX-232ENST00000495360 RTL5Q5HYW3 569 aaPredicted RBP22.3■■□□□ 1.16
APTX-232ENST00000495360 GRAPLQ8TC17 118 aaPredicted RBP22.3■■□□□ 1.16
APTX-232ENST00000495360 DDX58O95786 925 aaKnown RBP22.29■■□□□ 1.16
APTX-232ENST00000495360 SP8Q8IXZ3 490 aa22.29■■□□□ 1.16
APTX-232ENST00000495360 MYD88Q99836 296 aa22.29■■□□□ 1.16
APTX-232ENST00000495360 EIF6P56537 245 aaKnown RBP22.28■■□□□ 1.16
APTX-232ENST00000495360 TWISTNBQ3B726 338 aaPredicted RBP22.28■■□□□ 1.16
APTX-232ENST00000495360 DNAJC5GQ8N7S2 189 aa22.28■■□□□ 1.16
APTX-232ENST00000495360 STK31Q9BXU1 1019 aa22.28■■□□□ 1.16
APTX-232ENST00000495360 SALL2Q9Y467 1007 aaPredicted RBP22.28■■□□□ 1.16
APTX-232ENST00000495360 SCN4AP35499 1836 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 IRS4O14654 1257 aaPredicted RBP22.27■■□□□ 1.16
APTX-232ENST00000495360 PPIP5K2O43314 1243 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 POTEIP0CG38 1075 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 POTEJP0CG39 1038 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 CHADLQ6NUI6 762 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
APTX-232ENST00000495360 NIM1KQ8IY84 436 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 GPC2Q8N158 579 aa22.27■■□□□ 1.16
APTX-232ENST00000495360 SUPT20HQ8NEM7 779 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms