RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 PSMD1Q99460 953 aa12.6□□□□□ -0.39
GTF3C2-213ENST00000495298 DDX21Q9NR30 783 aaKnown RBP eCLIP12.6□□□□□ -0.39
GTF3C2-213ENST00000495298 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
GTF3C2-213ENST00000495298 TRAF5O00463 557 aa12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 PNMA8AQ86V59 439 aaPredicted RBP12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 RTF1Q92541 710 aaKnown RBP12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 ABT1Q9ULW3 272 aaKnown RBP12.59□□□□□ -0.39
GTF3C2-213ENST00000495298 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 RGL2O15211 777 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 GPTP24298 496 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 ALDH1B1P30837 517 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 FAM161AQ3B820 660 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 RIC1Q4ADV7 1423 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 CST9Q5W186 159 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 CYP4F22Q6NT55 531 aa12.58□□□□□ -0.4
GTF3C2-213ENST00000495298 PPP2R1AP30153 589 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 GRM1Q13255 1194 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 SUSD4Q5VX71 490 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 JDP2Q8WYK2 163 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 CAPNS2Q96L46 248 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 ZBTB3Q9H5J0 574 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 MAP3K15Q6ZN16 1313 aa12.57□□□□□ -0.4
GTF3C2-213ENST00000495298 LAMB2P55268 1798 aa12.56□□□□□ -0.4
GTF3C2-213ENST00000495298 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
GTF3C2-213ENST00000495298 CFAP53Q96M91 514 aa12.56□□□□□ -0.4
GTF3C2-213ENST00000495298 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-213ENST00000495298 RRP7AQ9Y3A4 280 aaKnown RBP12.56□□□□□ -0.4
GTF3C2-213ENST00000495298 TAF1P21675 1872 aa12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 AOC2O75106 756 aa12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 NTSR2O95665 410 aa12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 MYL6BP14649 208 aa12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 MAP2K1Q02750 393 aaPredicted RBP12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
GTF3C2-213ENST00000495298 CASP8AP2Q9UKL3 1982 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 ERVV-1B6SEH8 477 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 PPEF1O14829 653 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 SLC34A2O95436 690 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 LMOD1P29536 600 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 EIF4A1P60842 406 aaKnown RBP12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 AOC3Q16853 763 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 NUDCQ9Y266 331 aa12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
GTF3C2-213ENST00000495298 HTATSF1O43719 755 aaKnown RBP12.53□□□□□ -0.4
GTF3C2-213ENST00000495298 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
GTF3C2-213ENST00000495298 GPR101Q96P66 508 aaPredicted RBP12.53□□□□□ -0.4
GTF3C2-213ENST00000495298 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
GTF3C2-213ENST00000495298 SHTN1A0MZ66 631 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 PPIP5K2O43314 1243 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 CC2D2BQ6DHV5 1058 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 KIF6Q6ZMV9 814 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 USP50Q70EL3 339 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 NIM1KQ8IY84 436 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 GLIS2Q9BZE0 524 aaPredicted RBP12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 GPRC5DQ9NZD1 345 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 DUOX1Q9NRD9 1551 aa12.52□□□□□ -0.41
GTF3C2-213ENST00000495298 COL4A1P02462 1669 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 ANKRD36CQ5JPF3 1778 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 CCDC85CA6NKD9 419 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 ANXA1P04083 346 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 CXCL9Q07325 125 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 PROSER3Q2NL68 480 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 DLK2Q6UY11 383 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 PLEKHF1Q96S99 279 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 ABCC4O15439 1325 aa12.51□□□□□ -0.41
GTF3C2-213ENST00000495298 GMPSP49915 693 aaPredicted RBP12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 HIRAP54198 1017 aaPredicted RBP12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 PDIA6Q15084 440 aa12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 GIGYF2Q6Y7W6 1299 aaKnown RBP12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 SAPCD2Q86UD0 394 aa12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 TRPM4Q8TD43 1214 aa12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 ZNF428Q96B54 188 aa12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 ZIC5Q96T25 663 aa12.5□□□□□ -0.41
GTF3C2-213ENST00000495298 CELF2O95319 508 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-213ENST00000495298 ECE1P42892 770 aa12.49□□□□□ -0.41
GTF3C2-213ENST00000495298 ADARB2Q9NS39 739 aaKnown RBP12.49□□□□□ -0.41
GTF3C2-213ENST00000495298 ATP6V0A2Q9Y487 856 aa12.49□□□□□ -0.41
GTF3C2-213ENST00000495298 TNRC18O15417 2968 aaPredicted RBP12.49□□□□□ -0.41
GTF3C2-213ENST00000495298 YDJCA8MPS7 323 aa12.48□□□□□ -0.41
GTF3C2-213ENST00000495298 ZNRF3Q9ULT6 936 aa12.48□□□□□ -0.41
GTF3C2-213ENST00000495298 LRRC37AA6NMS7 1700 aa12.48□□□□□ -0.41
GTF3C2-213ENST00000495298 POLR2AP24928 1970 aaKnown RBP12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 RAD17O75943 681 aa12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 HCLS1P14317 486 aaPredicted RBP12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 RGS19P49795 217 aa12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 NFE2L2Q16236 605 aa12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 SLC10A5Q5PT55 438 aa12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 PNISRQ8TF01 805 aaKnown RBP12.47□□□□□ -0.41
GTF3C2-213ENST00000495298 NLRP3Q96P20 1036 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms