RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 LRRC37AA6NMS7 1700 aa15.27■□□□□ 0.04
VTI1A-208ENST00000494728 FSTL1Q12841 308 aa15.27■□□□□ 0.04
VTI1A-208ENST00000494728 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
VTI1A-208ENST00000494728 ZNF541Q9H0D2 1346 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 DDNO94850 711 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-208ENST00000494728 POTEIP0CG38 1075 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 POTEJP0CG39 1038 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 GTF2E1P29083 439 aaPredicted RBP15.26■□□□□ 0.03
VTI1A-208ENST00000494728 CCDC184Q52MB2 194 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 ZNF428Q96B54 188 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 NYXQ9GZU5 481 aa15.26■□□□□ 0.03
VTI1A-208ENST00000494728 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
VTI1A-208ENST00000494728 VEGFAP15692 232 aaPredicted RBP15.25■□□□□ 0.03
VTI1A-208ENST00000494728 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
VTI1A-208ENST00000494728 SOGA3Q5TF21 947 aa15.25■□□□□ 0.03
VTI1A-208ENST00000494728 SMC1BQ8NDV3 1235 aa15.25■□□□□ 0.03
VTI1A-208ENST00000494728 XAGE3Q8WTP9 111 aa15.25■□□□□ 0.03
VTI1A-208ENST00000494728 CHPF2Q9P2E5 772 aa15.25■□□□□ 0.03
VTI1A-208ENST00000494728 AIMP1Q12904 312 aaKnown RBP15.24■□□□□ 0.03
VTI1A-208ENST00000494728 COPS6Q7L5N1 327 aa15.24■□□□□ 0.03
VTI1A-208ENST00000494728 SYNE4Q8N205 404 aa15.24■□□□□ 0.03
VTI1A-208ENST00000494728 DUOX1Q9NRD9 1551 aa15.24■□□□□ 0.03
VTI1A-208ENST00000494728 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
VTI1A-208ENST00000494728 MBIPQ9NS73 344 aa15.23■□□□□ 0.03
VTI1A-208ENST00000494728 APAF1O14727 1248 aa15.22■□□□□ 0.03
VTI1A-208ENST00000494728 ZNF853P0CG23 659 aa15.22■□□□□ 0.03
VTI1A-208ENST00000494728 ALDH1B1P30837 517 aa15.22■□□□□ 0.03
VTI1A-208ENST00000494728 PARP10Q53GL7 1025 aa15.22■□□□□ 0.03
VTI1A-208ENST00000494728 NLRP10Q86W26 655 aa15.22■□□□□ 0.03
VTI1A-208ENST00000494728 DDX21Q9NR30 783 aaKnown RBP eCLIP15.22■□□□□ 0.03
VTI1A-208ENST00000494728 IARSP41252 1262 aaKnown RBP15.21■□□□□ 0.03
VTI1A-208ENST00000494728 HDGFL1Q5TGJ6 251 aa15.21■□□□□ 0.03
VTI1A-208ENST00000494728 DPY19L2Q6NUT2 758 aa15.21■□□□□ 0.03
VTI1A-208ENST00000494728 RPGRQ92834 1020 aaKnown RBP15.21■□□□□ 0.03
VTI1A-208ENST00000494728 CFAP44Q96MT7 982 aa15.21■□□□□ 0.03
VTI1A-208ENST00000494728 ABCC4O15439 1325 aa15.2■□□□□ 0.02
VTI1A-208ENST00000494728 TCERG1O14776 1098 aaKnown RBP15.2■□□□□ 0.02
VTI1A-208ENST00000494728 PPEF1O14829 653 aaPredicted RBP15.2■□□□□ 0.02
VTI1A-208ENST00000494728 PPP1R42Q7Z4L9 355 aa15.2■□□□□ 0.02
VTI1A-208ENST00000494728 RTKN2Q8IZC4 609 aa15.2■□□□□ 0.02
VTI1A-208ENST00000494728 KLRG1Q96E93 195 aa15.2■□□□□ 0.02
VTI1A-208ENST00000494728 L3MBTL3Q96JM7 780 aaPredicted RBP15.2■□□□□ 0.02
VTI1A-208ENST00000494728 PSMD1Q99460 953 aa15.2■□□□□ 0.02
VTI1A-208ENST00000494728 UTP14AQ9BVJ6 771 aaKnown RBP15.2■□□□□ 0.02
VTI1A-208ENST00000494728 HCLS1P14317 486 aaPredicted RBP15.19■□□□□ 0.02
VTI1A-208ENST00000494728 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
VTI1A-208ENST00000494728 CRAMP1Q96RY5 1269 aa15.19■□□□□ 0.02
VTI1A-208ENST00000494728 SPEF2Q9C093 1822 aa15.18■□□□□ 0.02
VTI1A-208ENST00000494728 FZD9O00144 591 aa15.18■□□□□ 0.02
VTI1A-208ENST00000494728 HOXB7P09629 217 aa15.18■□□□□ 0.02
VTI1A-208ENST00000494728 TCIRG1Q13488 830 aa15.18■□□□□ 0.02
VTI1A-208ENST00000494728 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
VTI1A-208ENST00000494728 RNF123Q5XPI4 1314 aa15.17■□□□□ 0.02
VTI1A-208ENST00000494728 RBM17Q96I25 401 aaKnown RBP15.17■□□□□ 0.02
VTI1A-208ENST00000494728 TAF1DQ9H5J8 278 aaPredicted RBP15.17■□□□□ 0.02
VTI1A-208ENST00000494728 MYH3P11055 1940 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 ATP5J2-PTCD1G3V325 749 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 HSP90AB3PQ58FF7 597 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 PLBD2Q8NHP8 589 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 NLRP3Q96P20 1036 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 ISCA1Q9BUE6 129 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
VTI1A-208ENST00000494728 DBF4Q9UBU7 674 aaPredicted RBP15.16■□□□□ 0.02
VTI1A-208ENST00000494728 ELL2O00472 640 aaPredicted RBP15.15■□□□□ 0.02
VTI1A-208ENST00000494728 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
VTI1A-208ENST00000494728 JMYQ8N9B5 988 aa15.15■□□□□ 0.02
VTI1A-208ENST00000494728 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
VTI1A-208ENST00000494728 PHAXQ9H814 394 aaKnown RBP15.15■□□□□ 0.02
VTI1A-208ENST00000494728 TRMT112Q9UI30 125 aaKnown RBP15.15■□□□□ 0.02
VTI1A-208ENST00000494728 ATP6V0A2Q9Y487 856 aa15.15■□□□□ 0.02
VTI1A-208ENST00000494728 SH3TC1Q8TE82 1336 aa15.15■□□□□ 0.02
VTI1A-208ENST00000494728 CC2D2BQ6DHV5 1058 aa15.14■□□□□ 0.01
VTI1A-208ENST00000494728 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
VTI1A-208ENST00000494728 SCN9AQ15858 1988 aa15.14■□□□□ 0.01
VTI1A-208ENST00000494728 PASKQ96RG2 1323 aa15.14■□□□□ 0.01
VTI1A-208ENST00000494728 IQCA1LA6NCM1 817 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 GNAI1P63096 354 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 AOC3Q16853 763 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 FAM89AQ96GI7 184 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 TRPM7Q96QT4 1865 aa15.13■□□□□ 0.01
VTI1A-208ENST00000494728 EPHX2P34913 555 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 SCNN1DP51172 638 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 EAPPQ56P03 285 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-208ENST00000494728 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
VTI1A-208ENST00000494728 LDHDQ86WU2 507 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 GPC2Q8N158 579 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 LARGE2Q8N3Y3 721 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 JDP2Q8WYK2 163 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 TSR2Q969E8 191 aaKnown RBP15.12■□□□□ 0.01
VTI1A-208ENST00000494728 HYPKQ9NX55 129 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 HACL1Q9UJ83 578 aa15.12■□□□□ 0.01
VTI1A-208ENST00000494728 PPIP5K2O43314 1243 aa15.11■□□□□ 0.01
VTI1A-208ENST00000494728 GJA3Q9Y6H8 435 aa15.11■□□□□ 0.01
VTI1A-208ENST00000494728 CACNA1FO60840 1977 aa15.11■□□□□ 0.01
VTI1A-208ENST00000494728 PSME4Q14997 1843 aa15.1■□□□□ 0.01
VTI1A-208ENST00000494728 ITGBL1O95965 494 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-208ENST00000494728 GRAPQ13588 217 aa15.1■□□□□ 0.01
VTI1A-208ENST00000494728 GRAPLQ8TC17 118 aaPredicted RBP15.1■□□□□ 0.01
VTI1A-208ENST00000494728 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms