RNA–Protein interactions for RNA: ENST00000494573.6

LDHA-211, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,154 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-211ENST00000494573 SASH1O94885 1247 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 SSFA2P28290 1259 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 NEK4P51957 841 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 CUL4AQ13619 759 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 RABL6Q3YEC7 729 aaPredicted RBP13.61□□□□□ -0.23
LDHA-211ENST00000494573 EVI5LQ96CN4 794 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 LSG1Q9H089 658 aaKnown RBP13.61□□□□□ -0.23
LDHA-211ENST00000494573 COPRSQ9NQ92 184 aa13.61□□□□□ -0.23
LDHA-211ENST00000494573 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.61□□□□□ -0.23
LDHA-211ENST00000494573 AACSQ86V21 672 aa13.6□□□□□ -0.23
LDHA-211ENST00000494573 PALD1Q9ULE6 856 aa13.6□□□□□ -0.23
LDHA-211ENST00000494573 ISY1Q9ULR0 285 aaKnown RBP13.6□□□□□ -0.23
LDHA-211ENST00000494573 MAP4K4O95819 1239 aaPredicted RBP13.59□□□□□ -0.23
LDHA-211ENST00000494573 RFX5P48382 616 aaPredicted RBP13.59□□□□□ -0.23
LDHA-211ENST00000494573 KIAA1211Q6ZU35 1233 aa13.59□□□□□ -0.23
LDHA-211ENST00000494573 INTS4Q96HW7 963 aaKnown RBP13.59□□□□□ -0.23
LDHA-211ENST00000494573 DIAPH3Q9NSV4 1193 aa13.59□□□□□ -0.23
LDHA-211ENST00000494573 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
LDHA-211ENST00000494573 SPEF2Q9C093 1822 aa13.59□□□□□ -0.23
LDHA-211ENST00000494573 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
LDHA-211ENST00000494573 MYH3P11055 1940 aa13.58□□□□□ -0.23
LDHA-211ENST00000494573 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 BAG4O95429 457 aaKnown RBP13.58□□□□□ -0.24
LDHA-211ENST00000494573 CASP7P55210 303 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 EPHA10Q5JZY3 1008 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 EAF2Q96CJ1 260 aaPredicted RBP13.58□□□□□ -0.24
LDHA-211ENST00000494573 TMX3Q96JJ7 454 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 IL25Q9H293 177 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 RFX7Q2KHR2 1363 aa13.58□□□□□ -0.24
LDHA-211ENST00000494573 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 EVA1CP58658 441 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
LDHA-211ENST00000494573 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 KCNB2Q92953 911 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
LDHA-211ENST00000494573 DISP2A7MBM2 1401 aa13.56□□□□□ -0.24
LDHA-211ENST00000494573 GOLGA6L3A6NEY3 463 aa13.56□□□□□ -0.24
LDHA-211ENST00000494573 H7C1W4 665 aa13.56□□□□□ -0.24
LDHA-211ENST00000494573 SNX14Q9Y5W7 946 aa13.56□□□□□ -0.24
LDHA-211ENST00000494573 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
LDHA-211ENST00000494573 A0A087WZG4 1122 aa13.55□□□□□ -0.24
LDHA-211ENST00000494573 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
LDHA-211ENST00000494573 PTPN12Q05209 780 aaKnown RBP13.55□□□□□ -0.24
LDHA-211ENST00000494573 UBE3BQ7Z3V4 1068 aa13.55□□□□□ -0.24
LDHA-211ENST00000494573 ZGPATQ8N5A5 531 aaKnown RBP13.55□□□□□ -0.24
LDHA-211ENST00000494573 CWC25Q9NXE8 425 aaPredicted RBP13.55□□□□□ -0.24
LDHA-211ENST00000494573 NUP98P52948 1817 aa13.55□□□□□ -0.24
LDHA-211ENST00000494573 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 PIP4K2AP48426 406 aaPredicted RBP13.54□□□□□ -0.24
LDHA-211ENST00000494573 CWC27Q6UX04 472 aaKnown RBP13.54□□□□□ -0.24
LDHA-211ENST00000494573 VSIG10Q8N0Z9 540 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 CCDC191Q8NCU4 936 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 TTC14Q96N46 770 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 TEX13AQ9BXU3 409 aaPredicted RBP13.54□□□□□ -0.24
LDHA-211ENST00000494573 TM6SF1Q9BZW5 370 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 CCDC8Q9H0W5 538 aaPredicted RBP13.54□□□□□ -0.24
LDHA-211ENST00000494573 STRN4Q9NRL3 753 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 MYH7P12883 1935 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 JCADQ9P266 1359 aa13.54□□□□□ -0.24
LDHA-211ENST00000494573 LAMA4Q16363 1823 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 ATP5JP18859 108 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 FOXO4P98177 505 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 TNNI3KQ59H18 835 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 TICAM2Q86XR7 235 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 SIL1Q9H173 461 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 GPR108Q9NPR9 543 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
LDHA-211ENST00000494573 FPGT-TNNI3KV9GXZ4 949 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
LDHA-211ENST00000494573 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
LDHA-211ENST00000494573 TCHHQ07283 1943 aa13.52□□□□□ -0.24
LDHA-211ENST00000494573 ATP5J2-PTCD1G3V325 749 aa13.52□□□□□ -0.25
LDHA-211ENST00000494573 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.25
LDHA-211ENST00000494573 KLHL40Q2TBA0 621 aa13.52□□□□□ -0.25
LDHA-211ENST00000494573 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
LDHA-211ENST00000494573 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
LDHA-211ENST00000494573 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
LDHA-211ENST00000494573 ZDHHC9Q9Y397 364 aa13.52□□□□□ -0.25
LDHA-211ENST00000494573 MED23Q9ULK4 1368 aa13.52□□□□□ -0.25
LDHA-211ENST00000494573 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 BRD1O95696 1058 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 A1BGP04217 495 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 MRE11P49959 708 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 NMIQ13287 307 aaPredicted RBP13.51□□□□□ -0.25
LDHA-211ENST00000494573 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
LDHA-211ENST00000494573 GZF1Q9H116 711 aaPredicted RBP13.51□□□□□ -0.25
LDHA-211ENST00000494573 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
LDHA-211ENST00000494573 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 RREB1Q92766 1687 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 PTH1RQ03431 593 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 TFCP2Q12800 502 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 NECTIN1Q15223 517 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 MCTP1Q6DN14 999 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 LMBR1LQ6UX01 489 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 RASEFQ8IZ41 740 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 MAP4K1Q92918 833 aa13.5□□□□□ -0.25
LDHA-211ENST00000494573 FSD1Q9BTV5 496 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms