RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 AIMP1Q12904 312 aaKnown RBP17.08■□□□□ 0.32
ERCC3-209ENST00000494464 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
ERCC3-209ENST00000494464 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
ERCC3-209ENST00000494464 IL16Q14005 1332 aa17.08■□□□□ 0.32
ERCC3-209ENST00000494464 LAMB2P55268 1798 aa17.08■□□□□ 0.32
ERCC3-209ENST00000494464 KIF3CO14782 793 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 TCIRG1Q13488 830 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 PLBD2Q8NHP8 589 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 C7orf43Q8WVR3 580 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 CHMP4AQ9BY43 222 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 TAOK3Q9H2K8 898 aa17.06■□□□□ 0.32
ERCC3-209ENST00000494464 CCDC93Q567U6 631 aa17.05■□□□□ 0.32
ERCC3-209ENST00000494464 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
ERCC3-209ENST00000494464 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
ERCC3-209ENST00000494464 UTP14AQ9BVJ6 771 aaKnown RBP17.05■□□□□ 0.32
ERCC3-209ENST00000494464 ZNF219Q9P2Y4 722 aaPredicted RBP17.05■□□□□ 0.32
ERCC3-209ENST00000494464 KDM2BQ8NHM5 1336 aa17.05■□□□□ 0.32
ERCC3-209ENST00000494464 SNED1Q8TER0 1413 aa17.05■□□□□ 0.32
ERCC3-209ENST00000494464 DDX60Q8IY21 1712 aaKnown RBP17.05■□□□□ 0.32
ERCC3-209ENST00000494464 HOXA10P31260 410 aaPredicted RBP17.04■□□□□ 0.32
ERCC3-209ENST00000494464 ANKRD13DQ6ZTN6 518 aa17.04■□□□□ 0.32
ERCC3-209ENST00000494464 SLC10A5Q5PT55 438 aa17.03■□□□□ 0.32
ERCC3-209ENST00000494464 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
ERCC3-209ENST00000494464 ELL2O00472 640 aaPredicted RBP17.02■□□□□ 0.32
ERCC3-209ENST00000494464 TSR2Q969E8 191 aaKnown RBP17.02■□□□□ 0.32
ERCC3-209ENST00000494464 NMRK2Q9NPI5 230 aa17.02■□□□□ 0.32
ERCC3-209ENST00000494464 WDR90Q96KV7 1748 aa17.02■□□□□ 0.31
ERCC3-209ENST00000494464 CCDC30Q5VVM6 783 aa17.02■□□□□ 0.31
ERCC3-209ENST00000494464 CRAMP1Q96RY5 1269 aa17.02■□□□□ 0.31
ERCC3-209ENST00000494464 ISCA1Q9BUE6 129 aa17.02■□□□□ 0.31
ERCC3-209ENST00000494464 SH3TC1Q8TE82 1336 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 FKBP4Q02790 459 aaKnown RBP eCLIP17.01■□□□□ 0.31
ERCC3-209ENST00000494464 GOLGA2Q08379 1002 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 C3orf67Q6ZVT6 689 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 WDR63Q8IWG1 891 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 RTKN2Q8IZC4 609 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 NLRP3Q96P20 1036 aa17.01■□□□□ 0.31
ERCC3-209ENST00000494464 FANCIQ9NVI1 1328 aa17■□□□□ 0.31
ERCC3-209ENST00000494464 SENP3-EIF4A1A0A087X0R7 540 aa17■□□□□ 0.31
ERCC3-209ENST00000494464 GLTPD2A6NH11 291 aa17■□□□□ 0.31
ERCC3-209ENST00000494464 CC2D2BQ6DHV5 1058 aa17■□□□□ 0.31
ERCC3-209ENST00000494464 RBM17Q96I25 401 aaKnown RBP17■□□□□ 0.31
ERCC3-209ENST00000494464 TRMT112Q9UI30 125 aaKnown RBP17■□□□□ 0.31
ERCC3-209ENST00000494464 CACNA1FO60840 1977 aa16.99■□□□□ 0.31
ERCC3-209ENST00000494464 TOMM70O94826 608 aa16.99■□□□□ 0.31
ERCC3-209ENST00000494464 TRIM28Q13263 835 aaKnown RBP16.99■□□□□ 0.31
ERCC3-209ENST00000494464 FAM9BQ8IZU0 186 aa16.99■□□□□ 0.31
ERCC3-209ENST00000494464 PHAXQ9H814 394 aaKnown RBP16.99■□□□□ 0.31
ERCC3-209ENST00000494464 TWISTNBQ3B726 338 aaPredicted RBP16.98■□□□□ 0.31
ERCC3-209ENST00000494464 GRIPAP1Q4V328 841 aa16.98■□□□□ 0.31
ERCC3-209ENST00000494464 OLFM4Q6UX06 510 aa16.98■□□□□ 0.31
ERCC3-209ENST00000494464 PSMD1Q99460 953 aa16.98■□□□□ 0.31
ERCC3-209ENST00000494464 LRRC37AA6NMS7 1700 aa16.98■□□□□ 0.31
ERCC3-209ENST00000494464 ABCC4O15439 1325 aa16.97■□□□□ 0.31
ERCC3-209ENST00000494464 PPEF1O14829 653 aaPredicted RBP16.97■□□□□ 0.31
ERCC3-209ENST00000494464 DDX58O95786 925 aaKnown RBP16.97■□□□□ 0.31
ERCC3-209ENST00000494464 RIC3Q7Z5B4 369 aa16.97■□□□□ 0.31
ERCC3-209ENST00000494464 ATP5J2-PTCD1G3V325 749 aa16.96■□□□□ 0.31
ERCC3-209ENST00000494464 HCLS1P14317 486 aaPredicted RBP16.96■□□□□ 0.31
ERCC3-209ENST00000494464 SYNE4Q8N205 404 aa16.96■□□□□ 0.31
ERCC3-209ENST00000494464 STK31Q9BXU1 1019 aa16.96■□□□□ 0.31
ERCC3-209ENST00000494464 DPY19L2Q6NUT2 758 aa16.95■□□□□ 0.3
ERCC3-209ENST00000494464 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
ERCC3-209ENST00000494464 IARSP41252 1262 aaKnown RBP16.94■□□□□ 0.3
ERCC3-209ENST00000494464 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-209ENST00000494464 METTL22Q9BUU2 404 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-209ENST00000494464 RRAGCQ9HB90 399 aa16.94■□□□□ 0.3
ERCC3-209ENST00000494464 ZNF277Q9NRM2 450 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-209ENST00000494464 SALL2Q9Y467 1007 aaPredicted RBP16.94■□□□□ 0.3
ERCC3-209ENST00000494464 HSPA6P17066 643 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 MYD88Q99836 296 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 ATP6V0A2Q9Y487 856 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 TAF1P21675 1872 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 SCN4AP35499 1836 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 ZNF521Q96K83 1311 aa16.93■□□□□ 0.3
ERCC3-209ENST00000494464 BBOX1O75936 387 aa16.92■□□□□ 0.3
ERCC3-209ENST00000494464 VEGFAP15692 232 aaPredicted RBP16.92■□□□□ 0.3
ERCC3-209ENST00000494464 SF3B3Q15393 1217 aaKnown RBP16.92■□□□□ 0.3
ERCC3-209ENST00000494464 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
ERCC3-209ENST00000494464 ZBTB38Q8NAP3 1195 aaPredicted RBP16.92■□□□□ 0.3
ERCC3-209ENST00000494464 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
ERCC3-209ENST00000494464 COL4A5P29400 1685 aa16.92■□□□□ 0.3
ERCC3-209ENST00000494464 GRAPQ13588 217 aa16.91■□□□□ 0.3
ERCC3-209ENST00000494464 KSR2Q6VAB6 950 aa16.91■□□□□ 0.3
ERCC3-209ENST00000494464 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
ERCC3-209ENST00000494464 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
ERCC3-209ENST00000494464 MAP3K2Q9Y2U5 619 aa16.91■□□□□ 0.3
ERCC3-209ENST00000494464 MYH3P11055 1940 aa16.91■□□□□ 0.3
ERCC3-209ENST00000494464 DUOX1Q9NRD9 1551 aa16.9■□□□□ 0.3
ERCC3-209ENST00000494464 IRS4O14654 1257 aaPredicted RBP16.9■□□□□ 0.3
ERCC3-209ENST00000494464 HSP90B1P14625 803 aaKnown RBP16.9■□□□□ 0.3
ERCC3-209ENST00000494464 EXOSC9Q06265 439 aaKnown RBP16.9■□□□□ 0.3
ERCC3-209ENST00000494464 FSTL1Q12841 308 aa16.9■□□□□ 0.3
ERCC3-209ENST00000494464 SLC51AQ86UW1 340 aa16.9■□□□□ 0.3
ERCC3-209ENST00000494464 ZNF428Q96B54 188 aa16.9■□□□□ 0.3
ERCC3-209ENST00000494464 TMX4Q9H1E5 349 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms