RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 PDZRN3Q9UPQ7 1066 aa30.06■■■□□ 2.4
CLIC3-203ENST00000494426 ADCY9O60503 1353 aa30.05■■■□□ 2.4
CLIC3-203ENST00000494426 GRIN3BO60391 1043 aa30.05■■■□□ 2.4
CLIC3-203ENST00000494426 FLIIQ13045 1269 aa30.05■■■□□ 2.4
CLIC3-203ENST00000494426 ARFGEF1Q9Y6D6 1849 aa30.05■■■□□ 2.4
CLIC3-203ENST00000494426 PI4KAP2A4QPH2 592 aa30.04■■■□□ 2.4
CLIC3-203ENST00000494426 SRGNP10124 158 aa30.04■■■□□ 2.4
CLIC3-203ENST00000494426 TRIM28Q13263 835 aaKnown RBP30.04■■■□□ 2.4
CLIC3-203ENST00000494426 PI4KAP1Q8N8J0 262 aa30.04■■■□□ 2.4
CLIC3-203ENST00000494426 ZNF428Q96B54 188 aa30.04■■■□□ 2.4
CLIC3-203ENST00000494426 METTL22Q9BUU2 404 aaPredicted RBP30.04■■■□□ 2.4
CLIC3-203ENST00000494426 MAP3K2Q9Y2U5 619 aa30.04■■■□□ 2.4
CLIC3-203ENST00000494426 DALRD3Q5D0E6 543 aaKnown RBP30.03■■■□□ 2.4
CLIC3-203ENST00000494426 MYD88Q99836 296 aa30.03■■■□□ 2.4
CLIC3-203ENST00000494426 SLC10A5Q5PT55 438 aa30.02■■■□□ 2.4
CLIC3-203ENST00000494426 SYNE4Q8N205 404 aa30.02■■■□□ 2.4
CLIC3-203ENST00000494426 RIC1Q4ADV7 1423 aa30.02■■■□□ 2.4
CLIC3-203ENST00000494426 UTRNP46939 3433 aa30.02■■■□□ 2.4
CLIC3-203ENST00000494426 ZNF622Q969S3 477 aaKnown RBP eCLIP30.01■■■□□ 2.39
CLIC3-203ENST00000494426 TTLL6Q8N841 843 aa30■■■□□ 2.39
CLIC3-203ENST00000494426 TRMT112Q9UI30 125 aaKnown RBP30■■■□□ 2.39
CLIC3-203ENST00000494426 RNF123Q5XPI4 1314 aa29.99■■■□□ 2.39
CLIC3-203ENST00000494426 CHD4Q14839 1912 aa29.99■■■□□ 2.39
CLIC3-203ENST00000494426 STYK1Q6J9G0 422 aa29.99■■■□□ 2.39
CLIC3-203ENST00000494426 C3orf67Q6ZVT6 689 aa29.99■■■□□ 2.39
CLIC3-203ENST00000494426 MASTLQ96GX5 879 aa29.99■■■□□ 2.39
CLIC3-203ENST00000494426 FKBP5Q13451 457 aaPredicted RBP29.98■■■□□ 2.39
CLIC3-203ENST00000494426 CACNA1SQ13698 1873 aa29.97■■■□□ 2.39
CLIC3-203ENST00000494426 IGKV5-2P06315 115 aa29.97■■■□□ 2.39
CLIC3-203ENST00000494426 CRY2Q49AN0 593 aa29.97■■■□□ 2.39
CLIC3-203ENST00000494426 MRPL50Q8N5N7 158 aaKnown RBP29.97■■■□□ 2.39
CLIC3-203ENST00000494426 SH3TC1Q8TE82 1336 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 LAMB2P55268 1798 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 NPR1P16066 1061 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 SSH1Q8WYL5 1049 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 FAM89AQ96GI7 184 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 SLX4Q8IY92 1834 aa29.96■■■□□ 2.39
CLIC3-203ENST00000494426 DDX60Q8IY21 1712 aaKnown RBP29.96■■■□□ 2.39
CLIC3-203ENST00000494426 CCDC191Q8NCU4 936 aa29.95■■■□□ 2.39
CLIC3-203ENST00000494426 ZBED9Q6R2W3 1325 aa29.95■■■□□ 2.38
CLIC3-203ENST00000494426 HCLS1P14317 486 aaPredicted RBP29.94■■■□□ 2.38
CLIC3-203ENST00000494426 CNKSR1Q969H4 720 aa29.94■■■□□ 2.38
CLIC3-203ENST00000494426 DNAAF4Q8WXU2 420 aa29.93■■■□□ 2.38
CLIC3-203ENST00000494426 NLRP3Q96P20 1036 aa29.93■■■□□ 2.38
CLIC3-203ENST00000494426 F6X3S4 739 aa29.92■■■□□ 2.38
CLIC3-203ENST00000494426 CT47B1P0C2W7 299 aaPredicted RBP29.92■■■□□ 2.38
CLIC3-203ENST00000494426 CWF19L2Q2TBE0 894 aaKnown RBP29.92■■■□□ 2.38
CLIC3-203ENST00000494426 ARHGAP27Q6ZUM4 889 aa29.92■■■□□ 2.38
CLIC3-203ENST00000494426 CWC25Q9NXE8 425 aaPredicted RBP29.92■■■□□ 2.38
CLIC3-203ENST00000494426 NEXNQ0ZGT2 675 aa29.91■■■□□ 2.38
CLIC3-203ENST00000494426 ALDH1L2Q3SY69 923 aa29.91■■■□□ 2.38
CLIC3-203ENST00000494426 RTL5Q5HYW3 569 aaPredicted RBP29.91■■■□□ 2.38
CLIC3-203ENST00000494426 ZBTB38Q8NAP3 1195 aaPredicted RBP29.91■■■□□ 2.38
CLIC3-203ENST00000494426 NEURL1BA8MQ27 555 aa29.9■■■□□ 2.38
CLIC3-203ENST00000494426 HOXA10P31260 410 aaPredicted RBP29.9■■■□□ 2.38
CLIC3-203ENST00000494426 PRPF40BQ6NWY9 871 aaKnown RBP29.9■■■□□ 2.38
CLIC3-203ENST00000494426 BCL2L13Q9BXK5 485 aa29.9■■■□□ 2.38
CLIC3-203ENST00000494426 PCCAP05165 728 aaPredicted RBP29.89■■■□□ 2.38
CLIC3-203ENST00000494426 JARID2Q92833 1246 aaPredicted RBP29.89■■■□□ 2.38
CLIC3-203ENST00000494426 C21orf2O43822 256 aa29.88■■■□□ 2.37
CLIC3-203ENST00000494426 IRS4O14654 1257 aaPredicted RBP29.87■■■□□ 2.37
CLIC3-203ENST00000494426 ALDH1B1P30837 517 aa29.87■■■□□ 2.37
CLIC3-203ENST00000494426 C7orf43Q8WVR3 580 aa29.87■■■□□ 2.37
CLIC3-203ENST00000494426 RPGRQ92834 1020 aaKnown RBP29.87■■■□□ 2.37
CLIC3-203ENST00000494426 ZNF219Q9P2Y4 722 aaPredicted RBP29.87■■■□□ 2.37
CLIC3-203ENST00000494426 YY1P25490 414 aa29.86■■■□□ 2.37
CLIC3-203ENST00000494426 BEND3Q5T5X7 828 aa29.86■■■□□ 2.37
CLIC3-203ENST00000494426 LINS1Q8NG48 757 aa29.86■■■□□ 2.37
CLIC3-203ENST00000494426 RBM17Q96I25 401 aaKnown RBP29.85■■■□□ 2.37
CLIC3-203ENST00000494426 CRAMP1Q96RY5 1269 aa29.85■■■□□ 2.37
CLIC3-203ENST00000494426 SMC4Q9NTJ3 1288 aa29.85■■■□□ 2.37
CLIC3-203ENST00000494426 RARSP54136 660 aaKnown RBP29.84■■■□□ 2.37
CLIC3-203ENST00000494426 GCKRQ14397 625 aa29.84■■■□□ 2.37
CLIC3-203ENST00000494426 FER1L6Q2WGJ9 1857 aa29.83■■■□□ 2.37
CLIC3-203ENST00000494426 H7C1W4 665 aa29.83■■■□□ 2.37
CLIC3-203ENST00000494426 SF3B3Q15393 1217 aaKnown RBP29.83■■■□□ 2.37
CLIC3-203ENST00000494426 SBF1O95248 1867 aa29.82■■■□□ 2.37
CLIC3-203ENST00000494426 TAF1P21675 1872 aa29.82■■■□□ 2.37
CLIC3-203ENST00000494426 PTPRCP08575 1304 aa29.82■■■□□ 2.36
CLIC3-203ENST00000494426 CDHR2Q9BYE9 1310 aa29.82■■■□□ 2.36
CLIC3-203ENST00000494426 BRPF1P55201 1214 aaPredicted RBP29.82■■■□□ 2.36
CLIC3-203ENST00000494426 OLFM4Q6UX06 510 aa29.81■■■□□ 2.36
CLIC3-203ENST00000494426 ABCC4O15439 1325 aa29.8■■■□□ 2.36
CLIC3-203ENST00000494426 NFKBIEO00221 500 aa29.8■■■□□ 2.36
CLIC3-203ENST00000494426 PRELPP51888 382 aa29.8■■■□□ 2.36
CLIC3-203ENST00000494426 CASP7P55210 303 aa29.8■■■□□ 2.36
CLIC3-203ENST00000494426 RASSF7Q02833 373 aa29.8■■■□□ 2.36
CLIC3-203ENST00000494426 SLC4A10Q6U841 1118 aa29.79■■■□□ 2.36
CLIC3-203ENST00000494426 SLC51AQ86UW1 340 aa29.79■■■□□ 2.36
CLIC3-203ENST00000494426 PDE8AO60658 829 aa29.78■■■□□ 2.36
CLIC3-203ENST00000494426 UBE3BQ7Z3V4 1068 aa29.78■■■□□ 2.36
CLIC3-203ENST00000494426 COL4A1P02462 1669 aa29.78■■■□□ 2.36
CLIC3-203ENST00000494426 DDX46Q7L014 1031 aaKnown RBP29.77■■■□□ 2.36
CLIC3-203ENST00000494426 NOB1Q9ULX3 412 aaKnown RBP29.77■■■□□ 2.36
CLIC3-203ENST00000494426 CCDC88AQ3V6T2 1871 aa29.76■■■□□ 2.36
CLIC3-203ENST00000494426 HSP90B1P14625 803 aaKnown RBP29.76■■■□□ 2.35
CLIC3-203ENST00000494426 SOGA3Q5TF21 947 aa29.76■■■□□ 2.35
CLIC3-203ENST00000494426 SNED1Q8TER0 1413 aa29.76■■■□□ 2.35
CLIC3-203ENST00000494426 ALDH1L1O75891 902 aa29.75■■■□□ 2.35
CLIC3-203ENST00000494426 GRAPQ13588 217 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms