RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 CCDC125Q86Z20 511 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
RIF1-211ENST00000494333 BRD4O60885 1362 aaPredicted RBP11.39□□□□□ -0.59
RIF1-211ENST00000494333 SPATA31A5Q5VU36 1347 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 SPATA31A7Q8IWB4 1347 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 USP6P35125 1406 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 MAGEB6P1A0A0J9YX57 407 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 EHBP1Q8NDI1 1231 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 CARD14Q9BXL6 1004 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 ZMYND15Q9H091 742 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
RIF1-211ENST00000494333 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.38□□□□□ -0.59
RIF1-211ENST00000494333 USP19O94966 1318 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 TOPAZ1Q8N9V7 1692 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 VARSP26640 1264 aaKnown RBP11.37□□□□□ -0.59
RIF1-211ENST00000494333 NR1H3Q13133 447 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 TMC1Q8TDI8 760 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 MRGPRX2Q96LB1 330 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 USP35Q9P2H5 1018 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 ABCA3Q99758 1704 aa11.37□□□□□ -0.59
RIF1-211ENST00000494333 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 ST20-MTHFSA0A0A6YYL1 179 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 ZBTB33Q86T24 672 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 ADAM32Q8TC27 787 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 PLCH1Q4KWH8 1693 aa11.36□□□□□ -0.59
RIF1-211ENST00000494333 COL14A1Q05707 1796 aaKnown RBP11.36□□□□□ -0.59
RIF1-211ENST00000494333 SPATA31A1Q5TZJ5 1347 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 NWD2Q9ULI1 1742 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 GDF9O60383 454 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 VAC14Q08AM6 782 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 SF3B2Q13435 895 aaKnown RBP11.35□□□□□ -0.59
RIF1-211ENST00000494333 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 LARP1Q6PKG0 1096 aaKnown RBP11.35□□□□□ -0.59
RIF1-211ENST00000494333 TRIM67Q6ZTA4 783 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 WWC1Q8IX03 1113 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 SLC12A5Q9H2X9 1139 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 TIMELESSQ9UNS1 1208 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 CPDO75976 1380 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 SSH2Q76I76 1423 aa11.35□□□□□ -0.59
RIF1-211ENST00000494333 KTN1Q86UP2 1357 aaKnown RBP11.34□□□□□ -0.59
RIF1-211ENST00000494333 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
RIF1-211ENST00000494333 FAM182BQ5T319 152 aa11.34□□□□□ -0.59
RIF1-211ENST00000494333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.34□□□□□ -0.59
RIF1-211ENST00000494333 CPSF1Q10570 1443 aaKnown RBP11.34□□□□□ -0.59
RIF1-211ENST00000494333 TTC21AQ8NDW8 1320 aa11.34□□□□□ -0.59
RIF1-211ENST00000494333 TNFRSF10AO00220 468 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 ERICH6Q7L0X2 663 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
RIF1-211ENST00000494333 DEFB132Q7Z7B7 95 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 KCNH5Q8NCM2 988 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 FAM174AQ8TBP5 190 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 PUS7Q96PZ0 661 aaKnown RBP11.33□□□□□ -0.6
RIF1-211ENST00000494333 TESK2Q96S53 571 aa11.33□□□□□ -0.6
RIF1-211ENST00000494333 BLMP54132 1417 aaPredicted RBP11.33□□□□□ -0.6
RIF1-211ENST00000494333 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
RIF1-211ENST00000494333 SIAH2O43255 324 aa11.32□□□□□ -0.6
RIF1-211ENST00000494333 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
RIF1-211ENST00000494333 TERF2IPQ9NYB0 399 aa11.32□□□□□ -0.6
RIF1-211ENST00000494333 ZNF330Q9Y3S2 320 aaPredicted RBP11.32□□□□□ -0.6
RIF1-211ENST00000494333 CAMTA1Q9Y6Y1 1673 aa11.32□□□□□ -0.6
RIF1-211ENST00000494333 ARHGEF25Q86VW2 580 aa11.31□□□□□ -0.6
RIF1-211ENST00000494333 TRMT44Q8IYL2 757 aaKnown RBP11.31□□□□□ -0.6
RIF1-211ENST00000494333 NRAPQ86VF7 1730 aa11.31□□□□□ -0.6
RIF1-211ENST00000494333 PHRF1Q9P1Y6 1649 aaKnown RBP11.31□□□□□ -0.6
RIF1-211ENST00000494333 AATKQ6ZMQ8 1374 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 NRKQ7Z2Y5 1582 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 TRAK2O60296 914 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PRR20EP86478 221 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PRR20CP86479 221 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PRR20DP86480 221 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PRR20BP86481 221 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PRR20AP86496 221 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 NME9Q86XW9 330 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 THRAP3Q9Y2W1 955 aaKnown RBP11.3□□□□□ -0.6
RIF1-211ENST00000494333 CLSPNQ9HAW4 1339 aa11.3□□□□□ -0.6
RIF1-211ENST00000494333 POM121CA8CG34 1229 aa11.29□□□□□ -0.6
RIF1-211ENST00000494333 TOM1L2Q6ZVM7 507 aa11.29□□□□□ -0.6
RIF1-211ENST00000494333 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
RIF1-211ENST00000494333 TLL2Q9Y6L7 1015 aa11.29□□□□□ -0.6
RIF1-211ENST00000494333 CSB-PGBD3P0DP91 1061 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 BAG6P46379 1132 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 TMF1P82094 1093 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 FAM196AQ6ZSG2 479 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 CCER1Q8TC90 406 aaPredicted RBP11.28□□□□□ -0.6
RIF1-211ENST00000494333 SLC10A4Q96EP9 437 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 BRWD3Q6RI45 1802 aa11.28□□□□□ -0.6
RIF1-211ENST00000494333 COL5A2P05997 1499 aaPredicted RBP11.27□□□□□ -0.6
RIF1-211ENST00000494333 CD163L1Q9NR16 1453 aa11.27□□□□□ -0.6
RIF1-211ENST00000494333 SLIT3O75094 1523 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 EIF4G2P78344 907 aaKnown RBP eCLIP11.27□□□□□ -0.61
RIF1-211ENST00000494333 ARID5BQ14865 1188 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 DZIP3Q86Y13 1208 aaKnown RBP11.27□□□□□ -0.61
RIF1-211ENST00000494333 CYP4X1Q8N118 509 aa11.27□□□□□ -0.61
RIF1-211ENST00000494333 MPNDQ8N594 471 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms