RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SOS2Q07890 1332 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-219ENST00000494323 ANKRD30AQ9BXX3 1397 aa7.93□□□□□ -1.14
PTCD3-219ENST00000494323 DAPK1P53355 1430 aa7.93□□□□□ -1.14
PTCD3-219ENST00000494323 ERBINQ96RT1 1412 aa7.93□□□□□ -1.14
PTCD3-219ENST00000494323 MAP3K1Q13233 1512 aa7.93□□□□□ -1.14
PTCD3-219ENST00000494323 H3BM21 787 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 WIPF1O43516 503 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 CSB-PGBD3P0DP91 1061 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 RASA1P20936 1047 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 ELOAQ14241 798 aaKnown RBP7.92□□□□□ -1.14
PTCD3-219ENST00000494323 LCE2CQ5TA81 110 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 ZNF784Q8NCA9 323 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-219ENST00000494323 SYNMO15061 1565 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 PTPN23Q9H3S7 1636 aa7.92□□□□□ -1.14
PTCD3-219ENST00000494323 TTLL8A6PVC2 850 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 ERVK-9P63128 1117 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 CC2D2BQ6DHV5 1058 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 LARGE2Q8N3Y3 721 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 DNMT3LQ9UJW3 386 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 USTQ9Y2C2 406 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 EFCAB6Q5THR3 1501 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 TET3O43151 1660 aa7.91□□□□□ -1.14
PTCD3-219ENST00000494323 PRDM15P57071 1507 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-219ENST00000494323 FGD6Q6ZV73 1430 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L15C9J2P7 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L10C9JJH3 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L13C9JLJ4 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L12C9JPN9 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L11C9JVI0 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L21D6R901 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L18D6R9N7 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L22D6RA61 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L17D6RBQ6 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L19D6RCP7 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L20D6RJB6 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 SPINT1O43278 529 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 GTF2IP78347 998 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 INSM1Q01101 510 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-219ENST00000494323 RELBQ01201 579 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 USP17L24Q0WX57 530 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.9□□□□□ -1.14
PTCD3-219ENST00000494323 OGFOD1Q8N543 542 aa7.9□□□□□ -1.14
PTCD3-219ENST00000494323 DNAAF2Q9NVR5 837 aaKnown RBP7.9□□□□□ -1.14
PTCD3-219ENST00000494323 MSH6P52701 1360 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 ZBTB7CA1YPR0 619 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 PTK7Q13308 1070 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 CRTC2Q53ET0 693 aaPredicted RBP7.89□□□□□ -1.15
PTCD3-219ENST00000494323 KCTD17Q8N5Z5 321 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 AGBL1Q96MI9 1066 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 NOVA2Q9UNW9 492 aaKnown RBP7.89□□□□□ -1.15
PTCD3-219ENST00000494323 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
PTCD3-219ENST00000494323 NOS1P29475 1434 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 ADH1AP07327 375 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 SCTRP47872 440 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 CLDN10P78369 228 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 CYLDQ9NQC7 956 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 TBX22Q9Y458 520 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 RBM19Q9Y4C8 960 aaKnown RBP7.88□□□□□ -1.15
PTCD3-219ENST00000494323 PCDHGA11Q9Y5H2 935 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 CROCC2H7BZ55 1655 aa7.88□□□□□ -1.15
PTCD3-219ENST00000494323 FIGNL2A6NMB9 653 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 ITGAEP38570 1179 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 PSME1Q06323 249 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 MEX3CQ5U5Q3 659 aaKnown RBP7.87□□□□□ -1.15
PTCD3-219ENST00000494323 ANKMY2Q8IV38 441 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 SIX5Q8N196 739 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 C19orf44Q9H6X5 657 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 POLMQ9NP87 494 aaPredicted RBP7.87□□□□□ -1.15
PTCD3-219ENST00000494323 LMTK2Q8IWU2 1503 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 MYO5BQ9ULV0 1848 aa7.87□□□□□ -1.15
PTCD3-219ENST00000494323 ANKRD50Q9ULJ7 1429 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 RIMS2Q9UQ26 1411 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ERBB4Q15303 1308 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 LILRA1O75019 489 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ATF3P18847 181 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 GMPRP36959 345 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 CYP2U1Q7Z449 544 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 PPARGC1BQ86YN6 1023 aaKnown RBP7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.86□□□□□ -1.15
PTCD3-219ENST00000494323 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ZNF594Q96JF6 807 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-219ENST00000494323 INSM2Q96T92 566 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-219ENST00000494323 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ZNF395Q9H8N7 513 aaPredicted RBP7.86□□□□□ -1.15
PTCD3-219ENST00000494323 ZMIZ1Q9ULJ6 1067 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 AMOTL2Q9Y2J4 779 aa7.86□□□□□ -1.15
PTCD3-219ENST00000494323 JCADQ9P266 1359 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 PLEKHG1Q9ULL1 1385 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 CHD2O14647 1828 aaKnown RBP7.85□□□□□ -1.15
PTCD3-219ENST00000494323 ZBTB7BO15156 539 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-219ENST00000494323 PPFIA3O75145 1194 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 ADD1P35611 737 aaKnown RBP7.85□□□□□ -1.15
PTCD3-219ENST00000494323 CTSOP43234 321 aaPredicted RBP7.85□□□□□ -1.15
PTCD3-219ENST00000494323 DPYDQ12882 1025 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 CCDC102BQ68D86 513 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 TPCN2Q8NHX9 752 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 KDM5AP29375 1690 aaKnown RBP7.85□□□□□ -1.15
PTCD3-219ENST00000494323 ZFYVE9O95405 1425 aa7.85□□□□□ -1.15
PTCD3-219ENST00000494323 ADGRB3O60242 1522 aa7.84□□□□□ -1.15
PTCD3-219ENST00000494323 PHLPP1O60346 1717 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms