RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 RASSF7Q02833 373 aa17.23■□□□□ 0.35
SAPCD1-211ENST00000494299 NUTM1Q86Y26 1132 aa17.23■□□□□ 0.35
SAPCD1-211ENST00000494299 ISCA1Q9BUE6 129 aa17.23■□□□□ 0.35
SAPCD1-211ENST00000494299 GPBP1L1Q9HC44 474 aaPredicted RBP17.23■□□□□ 0.35
SAPCD1-211ENST00000494299 DDX60Q8IY21 1712 aaKnown RBP17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 C21orf2O43822 256 aa17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 SOGA3Q5TF21 947 aa17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 PPP1R42Q7Z4L9 355 aa17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 TSPYL6Q8N831 410 aa17.22■□□□□ 0.35
SAPCD1-211ENST00000494299 ANKRD13DQ6ZTN6 518 aa17.21■□□□□ 0.35
SAPCD1-211ENST00000494299 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
SAPCD1-211ENST00000494299 ZNF521Q96K83 1311 aa17.21■□□□□ 0.34
SAPCD1-211ENST00000494299 NPHP1O15259 732 aa17.2■□□□□ 0.34
SAPCD1-211ENST00000494299 ALDH1B1P30837 517 aa17.2■□□□□ 0.34
SAPCD1-211ENST00000494299 C3orf67Q6ZVT6 689 aa17.2■□□□□ 0.34
SAPCD1-211ENST00000494299 UTP14AQ9BVJ6 771 aaKnown RBP17.2■□□□□ 0.34
SAPCD1-211ENST00000494299 CHMP4AQ9BY43 222 aa17.2■□□□□ 0.34
SAPCD1-211ENST00000494299 FAM177BA6PVY3 158 aa17.19■□□□□ 0.34
SAPCD1-211ENST00000494299 AIMP1Q12904 312 aaKnown RBP17.19■□□□□ 0.34
SAPCD1-211ENST00000494299 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
SAPCD1-211ENST00000494299 CRAMP1Q96RY5 1269 aa17.19■□□□□ 0.34
SAPCD1-211ENST00000494299 PHAXQ9H814 394 aaKnown RBP17.18■□□□□ 0.34
SAPCD1-211ENST00000494299 WDR90Q96KV7 1748 aa17.18■□□□□ 0.34
SAPCD1-211ENST00000494299 GTF2E1P29083 439 aaPredicted RBP17.17■□□□□ 0.34
SAPCD1-211ENST00000494299 CCDC30Q5VVM6 783 aa17.17■□□□□ 0.34
SAPCD1-211ENST00000494299 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
SAPCD1-211ENST00000494299 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
SAPCD1-211ENST00000494299 ELL2O00472 640 aaPredicted RBP17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 CCDC93Q567U6 631 aa17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 CC2D2BQ6DHV5 1058 aa17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
SAPCD1-211ENST00000494299 GLTPD2A6NH11 291 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 FKBP4Q02790 459 aaKnown RBP eCLIP17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 ZNF526Q8TF50 670 aaPredicted RBP17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 NLRP3Q96P20 1036 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 PSMD1Q99460 953 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 LRRC37AA6NMS7 1700 aa17.15■□□□□ 0.34
SAPCD1-211ENST00000494299 TAF1P21675 1872 aa17.14■□□□□ 0.33
SAPCD1-211ENST00000494299 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
SAPCD1-211ENST00000494299 GRIPAP1Q4V328 841 aa17.14■□□□□ 0.33
SAPCD1-211ENST00000494299 RTKN2Q8IZC4 609 aa17.14■□□□□ 0.33
SAPCD1-211ENST00000494299 KDM2BQ8NHM5 1336 aa17.14■□□□□ 0.33
SAPCD1-211ENST00000494299 POTECB2RU33 542 aa17.13■□□□□ 0.33
SAPCD1-211ENST00000494299 VAMP4O75379 141 aa17.13■□□□□ 0.33
SAPCD1-211ENST00000494299 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
SAPCD1-211ENST00000494299 TRMT112Q9UI30 125 aaKnown RBP17.13■□□□□ 0.33
SAPCD1-211ENST00000494299 SENP3-EIF4A1A0A087X0R7 540 aa17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 TOMM70O94826 608 aa17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 SF3B3Q15393 1217 aaKnown RBP17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 FAM9BQ8IZU0 186 aa17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 CCDC191Q8NCU4 936 aa17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 RPGRQ92834 1020 aaKnown RBP17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 RBM17Q96I25 401 aaKnown RBP17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 METTL22Q9BUU2 404 aaPredicted RBP17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 COL4A5P29400 1685 aa17.12■□□□□ 0.33
SAPCD1-211ENST00000494299 COL4A1P02462 1669 aa17.11■□□□□ 0.33
SAPCD1-211ENST00000494299 ATP5J2-PTCD1G3V325 749 aa17.11■□□□□ 0.33
SAPCD1-211ENST00000494299 HCLS1P14317 486 aaPredicted RBP17.11■□□□□ 0.33
SAPCD1-211ENST00000494299 GOLGA2Q08379 1002 aa17.11■□□□□ 0.33
SAPCD1-211ENST00000494299 ABCC4O15439 1325 aa17.11■□□□□ 0.33
SAPCD1-211ENST00000494299 LTBP1Q14766 1721 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 CCER2I3L3R5 266 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 BBOX1O75936 387 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 KSR2Q6VAB6 950 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 SLC51AQ86UW1 340 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 ZBTB38Q8NAP3 1195 aaPredicted RBP17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 FAM89AQ96GI7 184 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 ATP6V0A2Q9Y487 856 aa17.1■□□□□ 0.33
SAPCD1-211ENST00000494299 FZD9O00144 591 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 G2E3Q7L622 706 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 RIC3Q7Z5B4 369 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 RBM46Q8TBY0 533 aaKnown RBP17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 SCN4AP35499 1836 aa17.09■□□□□ 0.33
SAPCD1-211ENST00000494299 PI4KAP2A4QPH2 592 aa17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 PPEF1O14829 653 aaPredicted RBP17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 DDX58O95786 925 aaKnown RBP17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 PCCAP05165 728 aaPredicted RBP17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 SP8Q8IXZ3 490 aa17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 PI4KAP1Q8N8J0 262 aa17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 VPS33BQ9H267 617 aa17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 MYH3P11055 1940 aa17.08■□□□□ 0.32
SAPCD1-211ENST00000494299 SLC4A2P04920 1241 aa17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 IARSP41252 1262 aaKnown RBP17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 GRAPQ13588 217 aa17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 GRAPLQ8TC17 118 aaPredicted RBP17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 STK31Q9BXU1 1019 aa17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 RRAGCQ9HB90 399 aa17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
SAPCD1-211ENST00000494299 PCNTO95613 3336 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms