RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 NIP7Q9Y221 180 aaKnown RBP eCLIP15.06■□□□□ 0
UBA3-211ENST00000493957 ZNF652Q9Y2D9 606 aa15.06■□□□□ 0
UBA3-211ENST00000493957 UBN2Q6ZU65 1347 aa15.06■□□□□ 0
UBA3-211ENST00000493957 GOLGB1Q14789 3259 aaKnown RBP15.06■□□□□ 0
UBA3-211ENST00000493957 ATP10DQ9P241 1426 aa15.06■□□□□ 0
UBA3-211ENST00000493957 A0A0G2JLW4 131 aa15.05■□□□□ -0
UBA3-211ENST00000493957 ERVV-1B6SEH8 477 aa15.05■□□□□ -0
UBA3-211ENST00000493957 DPEP1P16444 411 aa15.05■□□□□ -0
UBA3-211ENST00000493957 YBX3P16989 372 aaKnown RBP eCLIP15.05■□□□□ -0
UBA3-211ENST00000493957 PRR5LQ6MZQ0 368 aa15.05■□□□□ -0
UBA3-211ENST00000493957 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
UBA3-211ENST00000493957 DDX60Q8IY21 1712 aaKnown RBP15.04■□□□□ -0
UBA3-211ENST00000493957 VAMP4O75379 141 aa15.04■□□□□ -0
UBA3-211ENST00000493957 CHRNA5P30532 468 aa15.04■□□□□ -0
UBA3-211ENST00000493957 GOLGA2Q08379 1002 aa15.04■□□□□ -0
UBA3-211ENST00000493957 GIGYF2Q6Y7W6 1299 aaKnown RBP15.04■□□□□ -0
UBA3-211ENST00000493957 ZNF428Q96B54 188 aa15.04■□□□□ -0
UBA3-211ENST00000493957 MYH16Q9H6N6 1097 aa15.04■□□□□ -0
UBA3-211ENST00000493957 TAF1P21675 1872 aa15.03■□□□□ -0
UBA3-211ENST00000493957 RGL2O15211 777 aa15.03■□□□□ -0
UBA3-211ENST00000493957 KCNA3P22001 575 aa15.03■□□□□ -0
UBA3-211ENST00000493957 SLFN5Q08AF3 891 aa15.03■□□□□ -0
UBA3-211ENST00000493957 CCDC30Q5VVM6 783 aa15.03■□□□□ -0
UBA3-211ENST00000493957 G2E3Q7L622 706 aa15.03■□□□□ -0
UBA3-211ENST00000493957 HYPKQ9NX55 129 aa15.03■□□□□ -0
UBA3-211ENST00000493957 SLX4Q8IY92 1834 aa15.03■□□□□ -0
UBA3-211ENST00000493957 ABCC12Q96J65 1359 aa15.02■□□□□ -0
UBA3-211ENST00000493957 CCDC88AQ3V6T2 1871 aa15.02■□□□□ -0
UBA3-211ENST00000493957 NBPF5PQ86XG9 351 aaPredicted RBP15.02■□□□□ -0
UBA3-211ENST00000493957 ZNF34Q8IZ26 560 aa15.02■□□□□ -0
UBA3-211ENST00000493957 CNBD1Q8NA66 436 aa15.02■□□□□ -0
UBA3-211ENST00000493957 TGFB2P61812 414 aa15.01□□□□□ -0.01
UBA3-211ENST00000493957 GPR162Q16538 588 aa15.01□□□□□ -0.01
UBA3-211ENST00000493957 SUSD4Q5VX71 490 aa15.01□□□□□ -0.01
UBA3-211ENST00000493957 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
UBA3-211ENST00000493957 E9PSI1 815 aa15□□□□□ -0.01
UBA3-211ENST00000493957 HNRNPUQ00839 825 aaKnown RBP eCLIP15□□□□□ -0.01
UBA3-211ENST00000493957 PLBD2Q8NHP8 589 aa15□□□□□ -0.01
UBA3-211ENST00000493957 SBF1O95248 1867 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 NTSR2O95665 410 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 TCIRG1Q13488 830 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 ANKRD13DQ6ZTN6 518 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 C2CD5Q86YS7 1000 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 STK31Q9BXU1 1019 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 UTRNP46939 3433 aa14.99□□□□□ -0.01
UBA3-211ENST00000493957 ADCY9O60503 1353 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 MYH3P11055 1940 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 ATP5J2-PTCD1G3V325 749 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 NPHP1O15259 732 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 ERFEQ4G0M1 354 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 TRMT2AQ8IZ69 625 aaKnown RBP14.98□□□□□ -0.01
UBA3-211ENST00000493957 SYNE4Q8N205 404 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
UBA3-211ENST00000493957 IBTKQ9P2D0 1353 aaPredicted RBP14.98□□□□□ -0.01
UBA3-211ENST00000493957 ST5P78524 1137 aa14.97□□□□□ -0.01
UBA3-211ENST00000493957 RIC3Q7Z5B4 369 aa14.97□□□□□ -0.01
UBA3-211ENST00000493957 NLRP10Q86W26 655 aa14.97□□□□□ -0.01
UBA3-211ENST00000493957 BRIP1Q9BX63 1249 aa14.97□□□□□ -0.01
UBA3-211ENST00000493957 FER1L6Q2WGJ9 1857 aa14.97□□□□□ -0.01
UBA3-211ENST00000493957 TPTE2Q6XPS3 522 aa14.96□□□□□ -0.01
UBA3-211ENST00000493957 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.01
UBA3-211ENST00000493957 MYD88Q99836 296 aa14.96□□□□□ -0.01
UBA3-211ENST00000493957 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
UBA3-211ENST00000493957 BCS1LQ9Y276 419 aa14.96□□□□□ -0.01
UBA3-211ENST00000493957 PI4KAP2A4QPH2 592 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 FLIIQ13045 1269 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 PARP10Q53GL7 1025 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 PI4KAP1Q8N8J0 262 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 PIM2Q9P1W9 311 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 MAP3K2Q9Y2U5 619 aa14.95□□□□□ -0.02
UBA3-211ENST00000493957 SPEF2Q9C093 1822 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 COL4A1P02462 1669 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 RIC1Q4ADV7 1423 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 H0YIN7 160 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 GTF2E1P29083 439 aaPredicted RBP14.94□□□□□ -0.02
UBA3-211ENST00000493957 PDE6BP35913 854 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 UTP14AQ9BVJ6 771 aaKnown RBP14.94□□□□□ -0.02
UBA3-211ENST00000493957 NYXQ9GZU5 481 aa14.94□□□□□ -0.02
UBA3-211ENST00000493957 SRGNP10124 158 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 RTL5Q5HYW3 569 aaPredicted RBP14.93□□□□□ -0.02
UBA3-211ENST00000493957 KSR2Q6VAB6 950 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 PPP1R42Q7Z4L9 355 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 JARID2Q92833 1246 aaPredicted RBP14.93□□□□□ -0.02
UBA3-211ENST00000493957 ZNF622Q969S3 477 aaKnown RBP eCLIP14.93□□□□□ -0.024e-6■□□□□ 8.2
UBA3-211ENST00000493957 METTL22Q9BUU2 404 aaPredicted RBP14.93□□□□□ -0.02
UBA3-211ENST00000493957 BCL2L13Q9BXK5 485 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 CHMP4AQ9BY43 222 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 PCDH10Q9P2E7 1040 aa14.93□□□□□ -0.02
UBA3-211ENST00000493957 KLRG2A4D1S0 409 aaPredicted RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 DDX58O95786 925 aaKnown RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 IGKV5-2P06315 115 aa14.92□□□□□ -0.02
UBA3-211ENST00000493957 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 DALRD3Q5D0E6 543 aaKnown RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 SLC51AQ86UW1 340 aa14.92□□□□□ -0.02
UBA3-211ENST00000493957 MRPL50Q8N5N7 158 aaKnown RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 TRMT112Q9UI30 125 aaKnown RBP14.92□□□□□ -0.02
UBA3-211ENST00000493957 F6X3S4 739 aa14.91□□□□□ -0.02
UBA3-211ENST00000493957 CWF19L2Q2TBE0 894 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms