RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 DDX21Q9NR30 783 aaKnown RBP eCLIP30.87■■■□□ 2.53
RHBDD3-206ENST00000493894 POTECB2RU33 542 aa30.86■■■□□ 2.53
RHBDD3-206ENST00000493894 HOXB7P09629 217 aa30.86■■■□□ 2.53
RHBDD3-206ENST00000493894 HOXA10P31260 410 aaPredicted RBP30.86■■■□□ 2.53
RHBDD3-206ENST00000493894 AIMP1Q12904 312 aaKnown RBP30.86■■■□□ 2.53
RHBDD3-206ENST00000493894 ZNF277Q9NRM2 450 aaPredicted RBP30.86■■■□□ 2.53
RHBDD3-206ENST00000493894 RNF123Q5XPI4 1314 aa30.85■■■□□ 2.53
RHBDD3-206ENST00000493894 DDNO94850 711 aaPredicted RBP30.85■■■□□ 2.53
RHBDD3-206ENST00000493894 HDGFL1Q5TGJ6 251 aa30.85■■■□□ 2.53
RHBDD3-206ENST00000493894 CFAP44Q96MT7 982 aa30.85■■■□□ 2.53
RHBDD3-206ENST00000493894 UTP14AQ9BVJ6 771 aaKnown RBP30.85■■■□□ 2.53
RHBDD3-206ENST00000493894 SNED1Q8TER0 1413 aa30.84■■■□□ 2.53
RHBDD3-206ENST00000493894 CC2D2BQ6DHV5 1058 aa30.84■■■□□ 2.53
RHBDD3-206ENST00000493894 CHPF2Q9P2E5 772 aa30.84■■■□□ 2.53
RHBDD3-206ENST00000493894 RBM17Q96I25 401 aaKnown RBP30.83■■■□□ 2.53
RHBDD3-206ENST00000493894 IARSP41252 1262 aaKnown RBP30.82■■■□□ 2.52
RHBDD3-206ENST00000493894 DNAJC5GQ8N7S2 189 aa30.82■■■□□ 2.52
RHBDD3-206ENST00000493894 NLRP3Q96P20 1036 aa30.82■■■□□ 2.52
RHBDD3-206ENST00000493894 PSMD1Q99460 953 aa30.82■■■□□ 2.52
RHBDD3-206ENST00000493894 HTRA3P83110 453 aa30.81■■■□□ 2.52
RHBDD3-206ENST00000493894 CRAMP1Q96RY5 1269 aa30.81■■■□□ 2.52
RHBDD3-206ENST00000493894 APAF1O14727 1248 aa30.8■■■□□ 2.52
RHBDD3-206ENST00000493894 PPEF1O14829 653 aaPredicted RBP30.8■■■□□ 2.52
RHBDD3-206ENST00000493894 C3orf67Q6ZVT6 689 aa30.8■■■□□ 2.52
RHBDD3-206ENST00000493894 SYNE4Q8N205 404 aa30.8■■■□□ 2.52
RHBDD3-206ENST00000493894 MBIPQ9NS73 344 aa30.8■■■□□ 2.52
RHBDD3-206ENST00000493894 IQCA1LA6NCM1 817 aa30.79■■■□□ 2.52
RHBDD3-206ENST00000493894 CALD1Q05682 793 aaKnown RBP30.79■■■□□ 2.52
RHBDD3-206ENST00000493894 GRIPAP1Q4V328 841 aa30.79■■■□□ 2.52
RHBDD3-206ENST00000493894 NLRP10Q86W26 655 aa30.79■■■□□ 2.52
RHBDD3-206ENST00000493894 DBF4Q9UBU7 674 aaPredicted RBP30.79■■■□□ 2.52
RHBDD3-206ENST00000493894 ZNF541Q9H0D2 1346 aa30.78■■■□□ 2.52
RHBDD3-206ENST00000493894 TCIRG1Q13488 830 aa30.78■■■□□ 2.52
RHBDD3-206ENST00000493894 SLC10A5Q5PT55 438 aa30.78■■■□□ 2.52
RHBDD3-206ENST00000493894 L3MBTL3Q96JM7 780 aaPredicted RBP30.78■■■□□ 2.52
RHBDD3-206ENST00000493894 ZEB1P37275 1124 aaPredicted RBP30.77■■■□□ 2.52
RHBDD3-206ENST00000493894 DUSP27Q5VZP5 1158 aa30.77■■■□□ 2.52
RHBDD3-206ENST00000493894 IFT57Q9NWB7 429 aa30.77■■■□□ 2.52
RHBDD3-206ENST00000493894 SCN4AP35499 1836 aa30.77■■■□□ 2.52
RHBDD3-206ENST00000493894 ZNF853P0CG23 659 aa30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 GNAI1P63096 354 aa30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 PLBD2Q8NHP8 589 aa30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 JDP2Q8WYK2 163 aa30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 KLRG1Q96E93 195 aa30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 TRMT112Q9UI30 125 aaKnown RBP30.75■■■□□ 2.51
RHBDD3-206ENST00000493894 SH3TC1Q8TE82 1336 aa30.74■■■□□ 2.51
RHBDD3-206ENST00000493894 LAMB2P55268 1798 aa30.74■■■□□ 2.51
RHBDD3-206ENST00000493894 TMX4Q9H1E5 349 aaPredicted RBP30.74■■■□□ 2.51
RHBDD3-206ENST00000493894 FZD9O00144 591 aa30.73■■■□□ 2.51
RHBDD3-206ENST00000493894 TCERG1O14776 1098 aaKnown RBP30.73■■■□□ 2.51
RHBDD3-206ENST00000493894 CHADLQ6NUI6 762 aa30.73■■■□□ 2.51
RHBDD3-206ENST00000493894 HYPKQ9NX55 129 aa30.73■■■□□ 2.51
RHBDD3-206ENST00000493894 ABCC4O15439 1325 aa30.73■■■□□ 2.51
RHBDD3-206ENST00000493894 ANKRD13DQ6ZTN6 518 aa30.72■■■□□ 2.51
RHBDD3-206ENST00000493894 HCLS1P14317 486 aaPredicted RBP30.71■■■□□ 2.51
RHBDD3-206ENST00000493894 POTEIP0CG38 1075 aa30.7■■■□□ 2.51
RHBDD3-206ENST00000493894 POTEJP0CG39 1038 aa30.7■■■□□ 2.51
RHBDD3-206ENST00000493894 SLC51AQ86UW1 340 aa30.7■■■□□ 2.51
RHBDD3-206ENST00000493894 TAF1DQ9H5J8 278 aaPredicted RBP30.7■■■□□ 2.51
RHBDD3-206ENST00000493894 COL4A5P29400 1685 aa30.69■■■□□ 2.5
RHBDD3-206ENST00000493894 GPC2Q8N158 579 aa30.69■■■□□ 2.5
RHBDD3-206ENST00000493894 LARGE2Q8N3Y3 721 aa30.69■■■□□ 2.5
RHBDD3-206ENST00000493894 HACL1Q9UJ83 578 aa30.69■■■□□ 2.5
RHBDD3-206ENST00000493894 ATP6V0A2Q9Y487 856 aa30.69■■■□□ 2.5
RHBDD3-206ENST00000493894 LDHDQ86WU2 507 aa30.68■■■□□ 2.5
RHBDD3-206ENST00000493894 EIF6P56537 245 aaKnown RBP30.67■■■□□ 2.5
RHBDD3-206ENST00000493894 ISCA1Q9BUE6 129 aa30.67■■■□□ 2.5
RHBDD3-206ENST00000493894 DDX46Q7L014 1031 aaKnown RBP30.66■■■□□ 2.5
RHBDD3-206ENST00000493894 JMYQ8N9B5 988 aa30.66■■■□□ 2.5
RHBDD3-206ENST00000493894 DDX60Q8IY21 1712 aaKnown RBP30.65■■■□□ 2.5
RHBDD3-206ENST00000493894 BBOX1O75936 387 aa30.65■■■□□ 2.5
RHBDD3-206ENST00000493894 GOLGA2Q08379 1002 aa30.65■■■□□ 2.5
RHBDD3-206ENST00000493894 ZNF428Q96B54 188 aa30.65■■■□□ 2.5
RHBDD3-206ENST00000493894 ATP5J2-PTCD1G3V325 749 aa30.64■■■□□ 2.5
RHBDD3-206ENST00000493894 ELL2O00472 640 aaPredicted RBP30.64■■■□□ 2.5
RHBDD3-206ENST00000493894 EPHX2P34913 555 aa30.64■■■□□ 2.5
RHBDD3-206ENST00000493894 CCDC184Q52MB2 194 aa30.64■■■□□ 2.5
RHBDD3-206ENST00000493894 EAPPQ56P03 285 aaPredicted RBP30.64■■■□□ 2.5
RHBDD3-206ENST00000493894 PPIP5K2O43314 1243 aa30.63■■■□□ 2.49
RHBDD3-206ENST00000493894 GRAPQ13588 217 aa30.63■■■□□ 2.49
RHBDD3-206ENST00000493894 NIM1KQ8IY84 436 aa30.63■■■□□ 2.49
RHBDD3-206ENST00000493894 SUPT20HQ8NEM7 779 aa30.63■■■□□ 2.49
RHBDD3-206ENST00000493894 GRAPLQ8TC17 118 aaPredicted RBP30.63■■■□□ 2.49
RHBDD3-206ENST00000493894 RIC3Q7Z5B4 369 aa30.62■■■□□ 2.49
RHBDD3-206ENST00000493894 VPS33BQ9H267 617 aa30.62■■■□□ 2.49
RHBDD3-206ENST00000493894 GJA3Q9Y6H8 435 aa30.62■■■□□ 2.49
RHBDD3-206ENST00000493894 ADAMTSL1Q8N6G6 1762 aa30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 DPP8Q6V1X1 898 aaPredicted RBP30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 PNMA8AQ86V59 439 aaPredicted RBP30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 SP8Q8IXZ3 490 aa30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 FAM89AQ96GI7 184 aa30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 CHMP4AQ9BY43 222 aa30.61■■■□□ 2.49
RHBDD3-206ENST00000493894 AOC3Q16853 763 aa30.6■■■□□ 2.49
RHBDD3-206ENST00000493894 C8orf58Q8NAV2 365 aa30.6■■■□□ 2.49
RHBDD3-206ENST00000493894 LMOD1P29536 600 aaPredicted RBP30.59■■■□□ 2.49
RHBDD3-206ENST00000493894 TMC4Q7Z404 712 aa30.59■■■□□ 2.49
RHBDD3-206ENST00000493894 RTFDC1Q9BY42 306 aaPredicted RBP30.59■■■□□ 2.49
RHBDD3-206ENST00000493894 PHAXQ9H814 394 aaKnown RBP30.59■■■□□ 2.49
RHBDD3-206ENST00000493894 CREBZFQ9NS37 354 aa30.59■■■□□ 2.49
RHBDD3-206ENST00000493894 LRRC37AA6NMS7 1700 aa30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms