RNA–Protein interactions for RNA: ENST00000493814.1

C1orf43-209, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2

Gene C1orf43, Length 441 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-209ENST00000493814 WDR90Q96KV7 1748 aa11.83□□□□□ -0.52
C1orf43-209ENST00000493814 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
C1orf43-209ENST00000493814 TAOK3Q9H2K8 898 aa11.82□□□□□ -0.52
C1orf43-209ENST00000493814 NMRK2Q9NPI5 230 aa11.82□□□□□ -0.52
C1orf43-209ENST00000493814 CRY2Q49AN0 593 aa11.81□□□□□ -0.52
C1orf43-209ENST00000493814 CCDC93Q567U6 631 aa11.81□□□□□ -0.52
C1orf43-209ENST00000493814 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
C1orf43-209ENST00000493814 MYH3P11055 1940 aa11.81□□□□□ -0.52
C1orf43-209ENST00000493814 RNF123Q5XPI4 1314 aa11.81□□□□□ -0.52
C1orf43-209ENST00000493814 SCN4AP35499 1836 aa11.81□□□□□ -0.52
C1orf43-209ENST00000493814 TCIRG1Q13488 830 aa11.8□□□□□ -0.52
C1orf43-209ENST00000493814 CCDC27Q2M243 656 aa11.8□□□□□ -0.52
C1orf43-209ENST00000493814 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
C1orf43-209ENST00000493814 C7orf43Q8WVR3 580 aa11.8□□□□□ -0.52
C1orf43-209ENST00000493814 UTP14AQ9BVJ6 771 aaKnown RBP11.8□□□□□ -0.52
C1orf43-209ENST00000493814 HYPKQ9NX55 129 aa11.8□□□□□ -0.52
C1orf43-209ENST00000493814 GLTPD2A6NH11 291 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 ELL2O00472 640 aaPredicted RBP11.79□□□□□ -0.52
C1orf43-209ENST00000493814 TOMM70O94826 608 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 ANKRD13DQ6ZTN6 518 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 PLBD2Q8NHP8 589 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 NLRP3Q96P20 1036 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 RRAGCQ9HB90 399 aa11.79□□□□□ -0.52
C1orf43-209ENST00000493814 LRRC37AA6NMS7 1700 aa11.78□□□□□ -0.52
C1orf43-209ENST00000493814 HOXA10P31260 410 aaPredicted RBP11.78□□□□□ -0.52
C1orf43-209ENST00000493814 FKBP4Q02790 459 aaKnown RBP eCLIP11.78□□□□□ -0.52
C1orf43-209ENST00000493814 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
C1orf43-209ENST00000493814 WWC1Q8IX03 1113 aa11.78□□□□□ -0.52
C1orf43-209ENST00000493814 RTKN2Q8IZC4 609 aa11.78□□□□□ -0.52
C1orf43-209ENST00000493814 C8orf58Q8NAV2 365 aa11.78□□□□□ -0.52
C1orf43-209ENST00000493814 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
C1orf43-209ENST00000493814 CHMP4AQ9BY43 222 aa11.78□□□□□ -0.52
C1orf43-209ENST00000493814 SNED1Q8TER0 1413 aa11.77□□□□□ -0.52
C1orf43-209ENST00000493814 SPEF2Q9C093 1822 aa11.77□□□□□ -0.52
C1orf43-209ENST00000493814 HSPA6P17066 643 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 CCDC30Q5VVM6 783 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 DPY19L2Q6NUT2 758 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 OLFM4Q6UX06 510 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 TSR2Q969E8 191 aaKnown RBP11.77□□□□□ -0.53
C1orf43-209ENST00000493814 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 TRMT112Q9UI30 125 aaKnown RBP11.77□□□□□ -0.53
C1orf43-209ENST00000493814 IL16Q14005 1332 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 SH3TC1Q8TE82 1336 aa11.77□□□□□ -0.53
C1orf43-209ENST00000493814 GOLGA2Q08379 1002 aa11.76□□□□□ -0.53
C1orf43-209ENST00000493814 CC2D2BQ6DHV5 1058 aa11.76□□□□□ -0.53
C1orf43-209ENST00000493814 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
C1orf43-209ENST00000493814 RIC3Q7Z5B4 369 aa11.76□□□□□ -0.53
C1orf43-209ENST00000493814 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
C1orf43-209ENST00000493814 ISCA1Q9BUE6 129 aa11.76□□□□□ -0.53
C1orf43-209ENST00000493814 PHAXQ9H814 394 aaKnown RBP11.76□□□□□ -0.53
C1orf43-209ENST00000493814 PPEF1O14829 653 aaPredicted RBP11.75□□□□□ -0.53
C1orf43-209ENST00000493814 VEGFAP15692 232 aaPredicted RBP11.75□□□□□ -0.53
C1orf43-209ENST00000493814 FAM9BQ8IZU0 186 aa11.75□□□□□ -0.53
C1orf43-209ENST00000493814 TSPYL6Q8N831 410 aa11.75□□□□□ -0.53
C1orf43-209ENST00000493814 ZNF277Q9NRM2 450 aaPredicted RBP11.75□□□□□ -0.53
C1orf43-209ENST00000493814 SALL2Q9Y467 1007 aaPredicted RBP11.75□□□□□ -0.53
C1orf43-209ENST00000493814 ATP5J2-PTCD1G3V325 749 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 HCLS1P14317 486 aaPredicted RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 IARSP41252 1262 aaKnown RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 TWISTNBQ3B726 338 aaPredicted RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 GRIPAP1Q4V328 841 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 ZNF428Q96B54 188 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 PSMD1Q99460 953 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 TMX4Q9H1E5 349 aaPredicted RBP11.74□□□□□ -0.53
C1orf43-209ENST00000493814 ABCC4O15439 1325 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
C1orf43-209ENST00000493814 FSTL1Q12841 308 aa11.73□□□□□ -0.53
C1orf43-209ENST00000493814 DDX46Q7L014 1031 aaKnown RBP11.73□□□□□ -0.53
C1orf43-209ENST00000493814 WDR63Q8IWG1 891 aa11.73□□□□□ -0.53
C1orf43-209ENST00000493814 FAM89AQ96GI7 184 aa11.73□□□□□ -0.53
C1orf43-209ENST00000493814 COL4A5P29400 1685 aa11.72□□□□□ -0.53
C1orf43-209ENST00000493814 FANCIQ9NVI1 1328 aa11.72□□□□□ -0.53
C1orf43-209ENST00000493814 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
C1orf43-209ENST00000493814 TRIM28Q13263 835 aaKnown RBP11.72□□□□□ -0.53
C1orf43-209ENST00000493814 MYD88Q99836 296 aa11.72□□□□□ -0.53
C1orf43-209ENST00000493814 LTBP1Q14766 1721 aa11.72□□□□□ -0.53
C1orf43-209ENST00000493814 POTECB2RU33 542 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 BBOX1O75936 387 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 APLP1P51693 650 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 GRAPQ13588 217 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 RTL5Q5HYW3 569 aaPredicted RBP11.71□□□□□ -0.53
C1orf43-209ENST00000493814 SMC1BQ8NDV3 1235 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 GRAPLQ8TC17 118 aaPredicted RBP11.71□□□□□ -0.53
C1orf43-209ENST00000493814 JDP2Q8WYK2 163 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 ATP6V0A2Q9Y487 856 aa11.71□□□□□ -0.53
C1orf43-209ENST00000493814 COL4A1P02462 1669 aa11.71□□□□□ -0.54
C1orf43-209ENST00000493814 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.54
C1orf43-209ENST00000493814 ADAMTSL1Q8N6G6 1762 aa11.7□□□□□ -0.54
C1orf43-209ENST00000493814 ZNF541Q9H0D2 1346 aa11.7□□□□□ -0.54
C1orf43-209ENST00000493814 IRS4O14654 1257 aaPredicted RBP11.7□□□□□ -0.54
C1orf43-209ENST00000493814 SF3B3Q15393 1217 aaKnown RBP11.7□□□□□ -0.54
C1orf43-209ENST00000493814 SLC51AQ86UW1 340 aa11.7□□□□□ -0.54
C1orf43-209ENST00000493814 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
C1orf43-209ENST00000493814 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms