RNA–Protein interactions for RNA: ENST00000493736.5

SORT1-207, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-207ENST00000493736 ELOA3DA6NLF2 546 aaPredicted RBP8.85□□□□□ -0.99
SORT1-207ENST00000493736 TGFBR3LH3BV60 316 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 ELOAQ14241 798 aaKnown RBP8.85□□□□□ -0.99
SORT1-207ENST00000493736 SWI5Q1ZZU3 235 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 ELOA3BQ3SY89 546 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 IER5Q5VY09 327 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 RAB44Q7Z6P3 723 aaPredicted RBP8.85□□□□□ -0.99
SORT1-207ENST00000493736 ELOA3Q8NG57 546 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 DCAF5Q96JK2 942 aa8.85□□□□□ -0.99
SORT1-207ENST00000493736 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.85□□□□□ -0.992e-8■■■■■ 155.6
SORT1-207ENST00000493736 ACIN1Q9UKV3 1341 aaKnown RBP8.84□□□□□ -0.99
SORT1-207ENST00000493736 GNB5O14775 395 aa8.84□□□□□ -0.99
SORT1-207ENST00000493736 HOXB4P17483 251 aaPredicted RBP8.84□□□□□ -0.99
SORT1-207ENST00000493736 DGKGP49619 791 aa8.84□□□□□ -0.99
SORT1-207ENST00000493736 GPAT2Q6NUI2 795 aa8.84□□□□□ -0.99
SORT1-207ENST00000493736 LINC00114Q6XXX2 140 aa8.84□□□□□ -0.99
SORT1-207ENST00000493736 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
SORT1-207ENST00000493736 ARID3CA6NKF2 412 aa8.83□□□□□ -1
SORT1-207ENST00000493736 DGKZQ13574 1117 aa8.83□□□□□ -1
SORT1-207ENST00000493736 BHMTQ93088 406 aa8.83□□□□□ -1
SORT1-207ENST00000493736 PRIMPOLQ96LW4 560 aa8.83□□□□□ -1
SORT1-207ENST00000493736 QTRT2Q9H974 415 aaKnown RBP8.83□□□□□ -1
SORT1-207ENST00000493736 KLK14Q9P0G3 267 aa8.83□□□□□ -1
SORT1-207ENST00000493736 PRMT3O60678 531 aa8.82□□□□□ -1
SORT1-207ENST00000493736 ATG7O95352 703 aa8.82□□□□□ -1
SORT1-207ENST00000493736 SRPK2P78362 688 aaKnown RBP8.82□□□□□ -1
SORT1-207ENST00000493736 STK32AQ8WU08 396 aa8.82□□□□□ -1
SORT1-207ENST00000493736 TNFRSF25Q93038 417 aa8.82□□□□□ -1
SORT1-207ENST00000493736 PBXIP1Q96AQ6 731 aa8.82□□□□□ -1
SORT1-207ENST00000493736 BCS1LQ9Y276 419 aa8.82□□□□□ -1
SORT1-207ENST00000493736 ADARB2-AS1A8MUL3 147 aa8.81□□□□□ -1
SORT1-207ENST00000493736 IGHA1P01876 353 aa8.81□□□□□ -1
SORT1-207ENST00000493736 EPB42P16452 691 aa8.81□□□□□ -1
SORT1-207ENST00000493736 ALYREFQ86V81 257 aaKnown RBP8.81□□□□□ -1
SORT1-207ENST00000493736 NOP53Q9NZM5 478 aaKnown RBP8.81□□□□□ -1
SORT1-207ENST00000493736 IDH3AP50213 366 aa8.8□□□□□ -1
SORT1-207ENST00000493736 FKBP5Q13451 457 aaPredicted RBP8.8□□□□□ -1
SORT1-207ENST00000493736 C11orf91Q3C1V1 193 aa8.8□□□□□ -1
SORT1-207ENST00000493736 PLA2G4EQ3MJ16 856 aa8.8□□□□□ -1
SORT1-207ENST00000493736 MYO19Q96H55 970 aa8.8□□□□□ -1
SORT1-207ENST00000493736 PNMA5Q96PV4 448 aa8.8□□□□□ -1
SORT1-207ENST00000493736 SUV39H2Q9H5I1 410 aa8.8□□□□□ -1
SORT1-207ENST00000493736 DMGDHQ9UI17 866 aaKnown RBP8.8□□□□□ -1
SORT1-207ENST00000493736 COL8A1P27658 744 aa8.79□□□□□ -1
SORT1-207ENST00000493736 ADH7P40394 386 aa8.79□□□□□ -1
SORT1-207ENST00000493736 TBC1D8BQ0IIM8 1120 aa8.79□□□□□ -1
SORT1-207ENST00000493736 MDFIQ99750 246 aa8.79□□□□□ -1
SORT1-207ENST00000493736 EFCC1Q9HA90 598 aa8.79□□□□□ -1
SORT1-207ENST00000493736 ARSDP51689 593 aa8.78□□□□□ -1
SORT1-207ENST00000493736 FAM69CQ0P6D2 419 aa8.78□□□□□ -1
SORT1-207ENST00000493736 CCINQ13939 588 aa8.78□□□□□ -1
SORT1-207ENST00000493736 TMEM164Q5U3C3 297 aa8.78□□□□□ -1
SORT1-207ENST00000493736 UBE2OQ9C0C9 1292 aaKnown RBP8.78□□□□□ -1
SORT1-207ENST00000493736 IGFLR1Q9H665 355 aa8.78□□□□□ -1
SORT1-207ENST00000493736 MICAL2O94851 1124 aa8.77□□□□□ -1.01
SORT1-207ENST00000493736 INPP5BP32019 993 aa8.77□□□□□ -1.01
SORT1-207ENST00000493736 C14orf37Q86TY3 774 aa8.77□□□□□ -1.01
SORT1-207ENST00000493736 IFT43Q96FT9 208 aa8.77□□□□□ -1.01
SORT1-207ENST00000493736 GSX2Q9BZM3 304 aa8.77□□□□□ -1.01
SORT1-207ENST00000493736 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.77□□□□□ -1.01
SORT1-207ENST00000493736 KRBA1A5PL33 1030 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 M0R082 166 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 MSTNO14793 375 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 OCLNQ16625 522 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 ZNF417Q8TAU3 575 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 ZNF587Q96SQ5 575 aaPredicted RBP8.76□□□□□ -1.01
SORT1-207ENST00000493736 LRFN2Q9ULH4 789 aa8.76□□□□□ -1.01
SORT1-207ENST00000493736 NFKB1P19838 968 aa8.75□□□□□ -1.01
SORT1-207ENST00000493736 COX20Q5RI15 118 aa8.75□□□□□ -1.01
SORT1-207ENST00000493736 MKNK1Q9BUB5 465 aa8.75□□□□□ -1.01
SORT1-207ENST00000493736 PLVAPQ9BX97 442 aa8.75□□□□□ -1.01
SORT1-207ENST00000493736 CXXC1Q9P0U4 656 aaPredicted RBP8.75□□□□□ -1.01
SORT1-207ENST00000493736 SPDYE3A6NKU9 549 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 ALBP02768 609 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 C16orf46Q6P387 395 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 TRIM11Q96F44 468 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 STARD13Q9Y3M8 1113 aa8.74□□□□□ -1.01
SORT1-207ENST00000493736 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
SORT1-207ENST00000493736 GRNP28799 593 aaKnown RBP8.73□□□□□ -1.01
SORT1-207ENST00000493736 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 TREML1Q86YW5 311 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 MICALL1Q8N3F8 863 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 CLP1Q92989 425 aaKnown RBP8.73□□□□□ -1.01
SORT1-207ENST00000493736 COL26A1Q96A83 441 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 SPOCK3Q9BQ16 436 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 UNC13AQ9UPW8 1703 aa8.73□□□□□ -1.01
SORT1-207ENST00000493736 ITGB2P05107 769 aa8.72□□□□□ -1.01
SORT1-207ENST00000493736 C11orf16Q9NQ32 467 aa8.72□□□□□ -1.01
SORT1-207ENST00000493736 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
SORT1-207ENST00000493736 SLC6A14Q9UN76 642 aa8.72□□□□□ -1.01
SORT1-207ENST00000493736 BRD2P25440 801 aaKnown RBP8.71□□□□□ -1.02
SORT1-207ENST00000493736 NAA30Q147X3 362 aaPredicted RBP8.71□□□□□ -1.02
SORT1-207ENST00000493736 C8orf86Q6ZUL3 223 aa8.71□□□□□ -1.02
SORT1-207ENST00000493736 RGL4Q8IZJ4 473 aa8.71□□□□□ -1.02
SORT1-207ENST00000493736 SAP130Q9H0E3 1048 aa8.71□□□□□ -1.02
SORT1-207ENST00000493736 PRDM6Q9NQX0 595 aa8.71□□□□□ -1.02
SORT1-207ENST00000493736 USP20Q9Y2K6 914 aa8.71□□□□□ -1.02
SORT1-207ENST00000493736 RTCBQ9Y3I0 505 aaKnown RBP8.71□□□□□ -1.02
SORT1-207ENST00000493736 OPLAHO14841 1288 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms