RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-218	ENST00000493726	RNF217	Q8TC41	542 aa		11.28	□□□□□ -0.6
LRCH3-218	ENST00000493726	TBC1D2B	Q9UPU7	963 aa		11.28	□□□□□ -0.6
LRCH3-218	ENST00000493726	COL16A1	Q07092	1604 aa	Predicted RBP	11.27	□□□□□ -0.6
LRCH3-218	ENST00000493726	MYOM2	P54296	1465 aa		11.27	□□□□□ -0.6
LRCH3-218	ENST00000493726	NALCN	Q8IZF0	1738 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	ASXL1	Q8IXJ9	1541 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	VSIG8	P0DPA2	414 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	LOR	P23490	312 aa	Predicted RBP	11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	PTGIR	P43119	386 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	SLAIN2	Q9P270	581 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	STK17A	Q9UEE5	414 aa		11.27	□□□□□ -0.61
LRCH3-218	ENST00000493726	ZNF326	Q5BKZ1	582 aa	Known RBP	11.26	□□□□□ -0.61
LRCH3-218	ENST00000493726	FOXD4L5	Q5VV16	416 aa	Predicted RBP	11.26	□□□□□ -0.61
LRCH3-218	ENST00000493726	CCDC155	Q8N6L0	562 aa		11.26	□□□□□ -0.61
LRCH3-218	ENST00000493726	KNDC1	Q76NI1	1749 aa		11.26	□□□□□ -0.61
LRCH3-218	ENST00000493726	MST1R	Q04912	1400 aa		11.26	□□□□□ -0.61
LRCH3-218	ENST00000493726	POTEA	Q6S8J7	498 aa		11.25	□□□□□ -0.61
LRCH3-218	ENST00000493726	NHSL1	Q5SYE7	1610 aa		11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	SCTR	P47872	440 aa		11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	GPR161	Q8N6U8	529 aa	Known RBP	11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	ZSCAN1	Q8NBB4	408 aa		11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	ADGRF5	Q8IZF2	1346 aa		11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	ROBO2	Q9HCK4	1378 aa		11.24	□□□□□ -0.61
LRCH3-218	ENST00000493726	SLC35F4	A4IF30	521 aa		11.23	□□□□□ -0.61
LRCH3-218	ENST00000493726	APBB1	O00213	710 aa		11.23	□□□□□ -0.61
LRCH3-218	ENST00000493726	PCDHB11	Q9Y5F2	797 aa		11.23	□□□□□ -0.61
LRCH3-218	ENST00000493726	ABCC11	Q96J66	1382 aa		11.23	□□□□□ -0.61
LRCH3-218	ENST00000493726	ATP5J2-PTCD1	G3V325	749 aa		11.22	□□□□□ -0.61
LRCH3-218	ENST00000493726	PHLPP1	O60346	1717 aa		11.22	□□□□□ -0.61
LRCH3-218	ENST00000493726	SHPRH	Q149N8	1683 aa		11.22	□□□□□ -0.61
LRCH3-218	ENST00000493726	CDC42BPG	Q6DT37	1551 aa		11.22	□□□□□ -0.61
LRCH3-218	ENST00000493726	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.22	□□□□□ -0.61
LRCH3-218	ENST00000493726	LRPPRC	P42704	1394 aa	Known RBP	11.21	□□□□□ -0.61
LRCH3-218	ENST00000493726	ERVK-9	P63128	1117 aa		11.21	□□□□□ -0.61
LRCH3-218	ENST00000493726	CC2D2B	Q6DHV5	1058 aa		11.21	□□□□□ -0.61
LRCH3-218	ENST00000493726	SIRT1	Q96EB6	747 aa		11.21	□□□□□ -0.61
LRCH3-218	ENST00000493726	MEN1	O00255	615 aa		11.2	□□□□□ -0.62
LRCH3-218	ENST00000493726	RNF20	Q5VTR2	975 aa		11.2	□□□□□ -0.62
LRCH3-218	ENST00000493726	BRINP3	Q76B58	766 aa		11.2	□□□□□ -0.62
LRCH3-218	ENST00000493726	ADGRB1	O14514	1584 aa		11.2	□□□□□ -0.62
LRCH3-218	ENST00000493726	JCAD	Q9P266	1359 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	SENP3-EIF4A1	A0A087X0R7	540 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	ATF3	P18847	181 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	IRF5	Q13568	498 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	PRICKLE2	Q7Z3G6	844 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	C14orf93	Q9H972	538 aa	Known RBP	11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	DLC1	Q96QB1	1528 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	C1orf167	Q5SNV9	1468 aa		11.19	□□□□□ -0.62
LRCH3-218	ENST00000493726	RHOQ	P17081	205 aa		11.18	□□□□□ -0.62
LRCH3-218	ENST00000493726	MCCD1	P59942	119 aa	Predicted RBP	11.18	□□□□□ -0.62
LRCH3-218	ENST00000493726	KRT76	Q01546	638 aa		11.18	□□□□□ -0.62
LRCH3-218	ENST00000493726	LYSMD3	Q7Z3D4	306 aa		11.18	□□□□□ -0.62
LRCH3-218	ENST00000493726	YTHDC2	Q9H6S0	1430 aa	Known RBP	11.18	□□□□□ -0.62
LRCH3-218	ENST00000493726		A0A1W2PRU2	124 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	CDC14C	A4D256	554 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	ITGA6	P23229	1130 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	VWA5B2	Q8N398	1253 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	GDPD2	Q9HCC8	539 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	CEP126	Q9P2H0	1117 aa		11.17	□□□□□ -0.62
LRCH3-218	ENST00000493726	DHX57	Q6P158	1386 aa	Known RBP	11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	CNTNAP3B	Q96NU0	1288 aa		11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	CDCA7	Q9BWT1	371 aa	Predicted RBP	11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	CNTNAP3	Q9BZ76	1288 aa		11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	OSBPL3	Q9H4L5	887 aa		11.16	□□□□□ -0.62
LRCH3-218	ENST00000493726	SPATA31A6	Q5VVP1	1343 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	RNF144A	P50876	292 aa	Predicted RBP	11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	VAC14	Q08AM6	782 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	RGL3	Q3MIN7	710 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	ZNF592	Q92610	1267 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	LRP6	O75581	1613 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	ADGRB2	O60241	1585 aa		11.15	□□□□□ -0.62
LRCH3-218	ENST00000493726	ABL2	P42684	1182 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	TSGA10IP	Q3SY00	556 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	CCDC125	Q86Z20	511 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	NANOS1	Q8WY41	292 aa	Known RBP	11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	ARHGEF10L	Q9HCE6	1279 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	RAB6B	Q9NRW1	208 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	FMN2	Q9NZ56	1722 aa		11.14	□□□□□ -0.63
LRCH3-218	ENST00000493726	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	RNFT1	Q5M7Z0	435 aa		11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	CYP2U1	Q7Z449	544 aa		11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	C14orf37	Q86TY3	774 aa		11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	PRM3	Q9NNZ6	103 aa		11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	CUEDC1	Q9NWM3	386 aa	Predicted RBP	11.13	□□□□□ -0.63
LRCH3-218	ENST00000493726	KIAA1210	Q9ULL0	1709 aa		11.12	□□□□□ -0.63
LRCH3-218	ENST00000493726	FAM181B	A6NEQ2	426 aa		11.12	□□□□□ -0.63
LRCH3-218	ENST00000493726	TRAK2	O60296	914 aa		11.12	□□□□□ -0.63
LRCH3-218	ENST00000493726	PLEKHH1	Q9ULM0	1364 aa		11.12	□□□□□ -0.63
LRCH3-218	ENST00000493726	PXDN	Q92626	1479 aa		11.12	□□□□□ -0.63
LRCH3-218	ENST00000493726	SV2A	Q7L0J3	742 aa		11.11	□□□□□ -0.63
LRCH3-218	ENST00000493726	NLRP3	Q96P20	1036 aa		11.11	□□□□□ -0.63
LRCH3-218	ENST00000493726	EIF4G2	P78344	907 aa	Known RBP eCLIP	11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	MCM6	Q14566	821 aa		11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	SLC27A3	Q5K4L6	730 aa		11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	CFAP70	Q5T0N1	1121 aa		11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	TMEM132E	Q6IEE7	984 aa		11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	PNPLA6	Q8IY17	1366 aa		11.1	□□□□□ -0.63
LRCH3-218	ENST00000493726	KIF1A	Q12756	1690 aa		11.09	□□□□□ -0.63

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