RNA–Protein interactions for RNA: ENST00000493699.1

HLA-E-203, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 907 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-203ENST00000493699 DICER1Q9UPY3 1922 aaKnown RBP28.66■■■□□ 2.18
HLA-E-203ENST00000493699 CALD1Q05682 793 aaKnown RBP28.65■■■□□ 2.18
HLA-E-203ENST00000493699 OLFM4Q6UX06 510 aa28.65■■■□□ 2.18
HLA-E-203ENST00000493699 TIAM2Q8IVF5 1701 aa28.65■■■□□ 2.18
HLA-E-203ENST00000493699 GNAI1P63096 354 aa28.64■■■□□ 2.18
HLA-E-203ENST00000493699 TCIRG1Q13488 830 aa28.64■■■□□ 2.18
HLA-E-203ENST00000493699 HSP90AB3PQ58FF7 597 aa28.64■■■□□ 2.18
HLA-E-203ENST00000493699 SLC10A5Q5PT55 438 aa28.64■■■□□ 2.18
HLA-E-203ENST00000493699 UTP14AQ9BVJ6 771 aaKnown RBP28.64■■■□□ 2.18
HLA-E-203ENST00000493699 DBF4Q9UBU7 674 aaPredicted RBP28.64■■■□□ 2.18
HLA-E-203ENST00000493699 C16orf71Q8IYS4 520 aaPredicted RBP28.63■■■□□ 2.17
HLA-E-203ENST00000493699 FKBP4Q02790 459 aaKnown RBP eCLIP28.62■■■□□ 2.17
HLA-E-203ENST00000493699 DPY19L2Q6NUT2 758 aa28.62■■■□□ 2.17
HLA-E-203ENST00000493699 C3orf67Q6ZVT6 689 aa28.62■■■□□ 2.17
HLA-E-203ENST00000493699 NLRP10Q86W26 655 aa28.62■■■□□ 2.17
HLA-E-203ENST00000493699 RTKN2Q8IZC4 609 aa28.62■■■□□ 2.17
HLA-E-203ENST00000493699 POTECB2RU33 542 aa28.61■■■□□ 2.17
HLA-E-203ENST00000493699 VEGFAP15692 232 aaPredicted RBP28.61■■■□□ 2.17
HLA-E-203ENST00000493699 RPGRQ92834 1020 aaKnown RBP28.61■■■□□ 2.17
HLA-E-203ENST00000493699 SNED1Q8TER0 1413 aa28.6■■■□□ 2.17
HLA-E-203ENST00000493699 PLBD2Q8NHP8 589 aa28.6■■■□□ 2.17
HLA-E-203ENST00000493699 CRAMP1Q96RY5 1269 aa28.6■■■□□ 2.17
HLA-E-203ENST00000493699 RNF123Q5XPI4 1314 aa28.6■■■□□ 2.17
HLA-E-203ENST00000493699 ANKRD13DQ6ZTN6 518 aa28.59■■■□□ 2.17
HLA-E-203ENST00000493699 NLRP3Q96P20 1036 aa28.59■■■□□ 2.17
HLA-E-203ENST00000493699 HYPKQ9NX55 129 aa28.59■■■□□ 2.17
HLA-E-203ENST00000493699 ANKRD36CQ5JPF3 1778 aa28.58■■■□□ 2.17
HLA-E-203ENST00000493699 ANP32CO43423 234 aa28.58■■■□□ 2.17
HLA-E-203ENST00000493699 FSTL1Q12841 308 aa28.58■■■□□ 2.17
HLA-E-203ENST00000493699 RBM17Q96I25 401 aaKnown RBP28.58■■■□□ 2.17
HLA-E-203ENST00000493699 CCDC27Q2M243 656 aa28.57■■■□□ 2.16
HLA-E-203ENST00000493699 SYNE4Q8N205 404 aa28.57■■■□□ 2.16
HLA-E-203ENST00000493699 ZNF277Q9NRM2 450 aaPredicted RBP28.57■■■□□ 2.16
HLA-E-203ENST00000493699 ELL2O00472 640 aaPredicted RBP28.56■■■□□ 2.16
HLA-E-203ENST00000493699 CC2D2BQ6DHV5 1058 aa28.56■■■□□ 2.16
HLA-E-203ENST00000493699 C8orf58Q8NAV2 365 aa28.56■■■□□ 2.16
HLA-E-203ENST00000493699 WDR90Q96KV7 1748 aa28.56■■■□□ 2.16
HLA-E-203ENST00000493699 APLP1P51693 650 aa28.55■■■□□ 2.16
HLA-E-203ENST00000493699 PSMD1Q99460 953 aa28.55■■■□□ 2.16
HLA-E-203ENST00000493699 ISCA1Q9BUE6 129 aa28.55■■■□□ 2.16
HLA-E-203ENST00000493699 MRS2Q9HD23 443 aa28.55■■■□□ 2.16
HLA-E-203ENST00000493699 NCBP3Q53F19 620 aaKnown RBP28.54■■■□□ 2.16
HLA-E-203ENST00000493699 TRMT112Q9UI30 125 aaKnown RBP28.54■■■□□ 2.16
HLA-E-203ENST00000493699 DDNO94850 711 aaPredicted RBP28.53■■■□□ 2.16
HLA-E-203ENST00000493699 HCLS1P14317 486 aaPredicted RBP28.53■■■□□ 2.16
HLA-E-203ENST00000493699 WWC1Q8IX03 1113 aa28.53■■■□□ 2.16
HLA-E-203ENST00000493699 SH3TC1Q8TE82 1336 aa28.52■■■□□ 2.16
HLA-E-203ENST00000493699 IARSP41252 1262 aaKnown RBP28.52■■■□□ 2.16
HLA-E-203ENST00000493699 SLC51AQ86UW1 340 aa28.52■■■□□ 2.16
HLA-E-203ENST00000493699 PPEF1O14829 653 aaPredicted RBP28.51■■■□□ 2.15
HLA-E-203ENST00000493699 GRIPAP1Q4V328 841 aa28.51■■■□□ 2.15
HLA-E-203ENST00000493699 SMC1BQ8NDV3 1235 aa28.51■■■□□ 2.15
HLA-E-203ENST00000493699 PHAXQ9H814 394 aaKnown RBP28.51■■■□□ 2.15
HLA-E-203ENST00000493699 TRIM28Q13263 835 aaKnown RBP28.5■■■□□ 2.15
HLA-E-203ENST00000493699 TSPYL6Q8N831 410 aa28.5■■■□□ 2.15
HLA-E-203ENST00000493699 ATP5J2-PTCD1G3V325 749 aa28.49■■■□□ 2.15
HLA-E-203ENST00000493699 ABCC4O15439 1325 aa28.48■■■□□ 2.15
HLA-E-203ENST00000493699 FZD9O00144 591 aa28.48■■■□□ 2.15
HLA-E-203ENST00000493699 DNAJC5GQ8N7S2 189 aa28.48■■■□□ 2.15
HLA-E-203ENST00000493699 TSR2Q969E8 191 aaKnown RBP28.48■■■□□ 2.15
HLA-E-203ENST00000493699 ZNF428Q96B54 188 aa28.48■■■□□ 2.15
HLA-E-203ENST00000493699 TCERG1O14776 1098 aaKnown RBP28.47■■■□□ 2.15
HLA-E-203ENST00000493699 L3MBTL3Q96JM7 780 aaPredicted RBP28.47■■■□□ 2.15
HLA-E-203ENST00000493699 ATP6V0A2Q9Y487 856 aa28.47■■■□□ 2.15
HLA-E-203ENST00000493699 CCDC30Q5VVM6 783 aa28.46■■■□□ 2.15
HLA-E-203ENST00000493699 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
HLA-E-203ENST00000493699 CHMP4AQ9BY43 222 aa28.46■■■□□ 2.15
HLA-E-203ENST00000493699 LAMB2P55268 1798 aa28.46■■■□□ 2.15
HLA-E-203ENST00000493699 IL16Q14005 1332 aa28.45■■■□□ 2.15
HLA-E-203ENST00000493699 ZNF541Q9H0D2 1346 aa28.45■■■□□ 2.15
HLA-E-203ENST00000493699 BBOX1O75936 387 aa28.45■■■□□ 2.14
HLA-E-203ENST00000493699 RIC3Q7Z5B4 369 aa28.45■■■□□ 2.14
HLA-E-203ENST00000493699 GOLGA2Q08379 1002 aa28.44■■■□□ 2.14
HLA-E-203ENST00000493699 COL4A5P29400 1685 aa28.42■■■□□ 2.14
HLA-E-203ENST00000493699 DDX46Q7L014 1031 aaKnown RBP28.42■■■□□ 2.14
HLA-E-203ENST00000493699 SP8Q8IXZ3 490 aa28.42■■■□□ 2.14
HLA-E-203ENST00000493699 JDP2Q8WYK2 163 aa28.42■■■□□ 2.14
HLA-E-203ENST00000493699 GRAPQ13588 217 aa28.41■■■□□ 2.14
HLA-E-203ENST00000493699 SF3B3Q15393 1217 aaKnown RBP28.41■■■□□ 2.14
HLA-E-203ENST00000493699 GRAPLQ8TC17 118 aaPredicted RBP28.41■■■□□ 2.14
HLA-E-203ENST00000493699 DDX60Q8IY21 1712 aaKnown RBP28.4■■■□□ 2.14
HLA-E-203ENST00000493699 IQCA1LA6NCM1 817 aa28.4■■■□□ 2.14
HLA-E-203ENST00000493699 POTEIP0CG38 1075 aa28.4■■■□□ 2.14
HLA-E-203ENST00000493699 POTEJP0CG39 1038 aa28.4■■■□□ 2.14
HLA-E-203ENST00000493699 HTRA3P83110 453 aa28.4■■■□□ 2.14
HLA-E-203ENST00000493699 RTFDC1Q9BY42 306 aaPredicted RBP28.4■■■□□ 2.14
HLA-E-203ENST00000493699 TMX4Q9H1E5 349 aaPredicted RBP28.4■■■□□ 2.14
HLA-E-203ENST00000493699 VPS33BQ9H267 617 aa28.39■■■□□ 2.14
HLA-E-203ENST00000493699 TAF1DQ9H5J8 278 aaPredicted RBP28.39■■■□□ 2.14
HLA-E-203ENST00000493699 TWISTNBQ3B726 338 aaPredicted RBP28.38■■■□□ 2.13
HLA-E-203ENST00000493699 RTL5Q5HYW3 569 aaPredicted RBP28.38■■■□□ 2.13
HLA-E-203ENST00000493699 WDR63Q8IWG1 891 aa28.38■■■□□ 2.13
HLA-E-203ENST00000493699 GPC2Q8N158 579 aa28.38■■■□□ 2.13
HLA-E-203ENST00000493699 LARGE2Q8N3Y3 721 aa28.38■■■□□ 2.13
HLA-E-203ENST00000493699 ZBTB38Q8NAP3 1195 aaPredicted RBP28.38■■■□□ 2.13
HLA-E-203ENST00000493699 MYD88Q99836 296 aa28.38■■■□□ 2.13
HLA-E-203ENST00000493699 METTL22Q9BUU2 404 aaPredicted RBP28.38■■■□□ 2.13
HLA-E-203ENST00000493699 SCN4AP35499 1836 aa28.38■■■□□ 2.13
HLA-E-203ENST00000493699 IRS4O14654 1257 aaPredicted RBP28.37■■■□□ 2.13
HLA-E-203ENST00000493699 CCDC191Q8NCU4 936 aa28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms