RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 ARFGEF1Q9Y6D6 1849 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 ANKRD31Q8N7Z5 1873 aa8.98□□□□□ -0.97
TOP3A-207ENST00000493648 IBTKQ9P2D0 1353 aaPredicted RBP8.98□□□□□ -0.97
TOP3A-207ENST00000493648 NLRP10Q86W26 655 aa8.97□□□□□ -0.97
TOP3A-207ENST00000493648 ZNF784Q8NCA9 323 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-207ENST00000493648 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
TOP3A-207ENST00000493648 PHAXQ9H814 394 aaKnown RBP8.97□□□□□ -0.97
TOP3A-207ENST00000493648 TRMT112Q9UI30 125 aaKnown RBP8.97□□□□□ -0.97
TOP3A-207ENST00000493648 RNF123Q5XPI4 1314 aa8.97□□□□□ -0.97
TOP3A-207ENST00000493648 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
TOP3A-207ENST00000493648 DLEC1Q9Y238 1755 aa8.96□□□□□ -0.97
TOP3A-207ENST00000493648 C21orf2O43822 256 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 VAMP4O75379 141 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 NTSR2O95665 410 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 SLC4A2P04920 1241 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
TOP3A-207ENST00000493648 SLC10A5Q5PT55 438 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 SOGA3Q5TF21 947 aa8.96□□□□□ -0.98
TOP3A-207ENST00000493648 RPGRQ92834 1020 aaKnown RBP8.96□□□□□ -0.98
TOP3A-207ENST00000493648 ZNF219Q9P2Y4 722 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-207ENST00000493648 TCERG1O14776 1098 aaKnown RBP8.95□□□□□ -0.98
TOP3A-207ENST00000493648 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
TOP3A-207ENST00000493648 C9orf131Q5VYM1 1079 aa8.95□□□□□ -0.98
TOP3A-207ENST00000493648 PRPF40BQ6NWY9 871 aaKnown RBP8.95□□□□□ -0.98
TOP3A-207ENST00000493648 KSR2Q6VAB6 950 aa8.95□□□□□ -0.98
TOP3A-207ENST00000493648 MIER1Q8N108 512 aa8.95□□□□□ -0.98
TOP3A-207ENST00000493648 RBM17Q96I25 401 aaKnown RBP8.95□□□□□ -0.98
TOP3A-207ENST00000493648 ISCA1Q9BUE6 129 aa8.95□□□□□ -0.98
TOP3A-207ENST00000493648 SH3TC1Q8TE82 1336 aa8.95□□□□□ -0.98
TOP3A-207ENST00000493648 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 E9PSI1 815 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 ATP5J2-PTCD1G3V325 749 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 HSP90B1P14625 803 aaKnown RBP8.94□□□□□ -0.98
TOP3A-207ENST00000493648 LMNB1P20700 586 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 HOXA10P31260 410 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-207ENST00000493648 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 CRAMP1Q96RY5 1269 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 MYD88Q99836 296 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-207ENST00000493648 TMX4Q9H1E5 349 aaPredicted RBP8.94□□□□□ -0.98
TOP3A-207ENST00000493648 RNF181Q9P0P0 153 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 ZNF521Q96K83 1311 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 RIC1Q4ADV7 1423 aa8.94□□□□□ -0.98
TOP3A-207ENST00000493648 CACNA1FO60840 1977 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 PI4KAP2A4QPH2 592 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 HCLS1P14317 486 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-207ENST00000493648 NEXNQ0ZGT2 675 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 CCDC93Q567U6 631 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 RTKN2Q8IZC4 609 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 PI4KAP1Q8N8J0 262 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 CCDC191Q8NCU4 936 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 C7orf43Q8WVR3 580 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 FAM89AQ96GI7 184 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
TOP3A-207ENST00000493648 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 SLX4Q8IY92 1834 aa8.93□□□□□ -0.98
TOP3A-207ENST00000493648 SBF1O95248 1867 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 CACNA1SQ13698 1873 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 COL11A2P13942 1736 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-207ENST00000493648 RASSF7Q02833 373 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 SLFN5Q08AF3 891 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 FLIIQ13045 1269 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 GRIPAP1Q4V328 841 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 DDX46Q7L014 1031 aaKnown RBP8.92□□□□□ -0.98
TOP3A-207ENST00000493648 G2E3Q7L622 706 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 SYNE4Q8N205 404 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-207ENST00000493648 ZNF526Q8TF50 670 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-207ENST00000493648 ZNF428Q96B54 188 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 TAOK3Q9H2K8 898 aa8.92□□□□□ -0.98
TOP3A-207ENST00000493648 CWC25Q9NXE8 425 aaPredicted RBP8.92□□□□□ -0.98
TOP3A-207ENST00000493648 ARFGEF2Q9Y6D5 1785 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 ADCY9O60503 1353 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 LTBP3Q9NS15 1303 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 NFKBIEO00221 500 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 IRS4O14654 1257 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-207ENST00000493648 BBOX1O75936 387 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 FKBP5Q13451 457 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-207ENST00000493648 RTL5Q5HYW3 569 aaPredicted RBP8.91□□□□□ -0.98
TOP3A-207ENST00000493648 C3orf67Q6ZVT6 689 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 CCDC88AQ3V6T2 1871 aa8.91□□□□□ -0.98
TOP3A-207ENST00000493648 FER1L6Q2WGJ9 1857 aa8.9□□□□□ -0.98
TOP3A-207ENST00000493648 KDM2BQ8NHM5 1336 aa8.9□□□□□ -0.98
TOP3A-207ENST00000493648 ZC3H4Q9UPT8 1303 aaKnown RBP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 PPEF1O14829 653 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 PCCAP05165 728 aaPredicted RBP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 SF3B3Q15393 1217 aaKnown RBP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 DPY19L2Q6NUT2 758 aa8.9□□□□□ -0.98
TOP3A-207ENST00000493648 TNRC6CQ9HCJ0 1690 aaKnown RBP8.9□□□□□ -0.98
TOP3A-207ENST00000493648 ABCC4O15439 1325 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 PDE8AO60658 829 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 PRELPP51888 382 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 OLFM4Q6UX06 510 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 TMC4Q7Z404 712 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 DNAAF4Q8WXU2 420 aa8.89□□□□□ -0.99
TOP3A-207ENST00000493648 CDCA7LQ96GN5 454 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms