RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 SRGNP10124 158 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 ZNF34Q8IZ26 560 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 EXOC6Q8TAG9 804 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 CRBNQ96SW2 442 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 SETDB2Q96T68 719 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 CHPF2Q9P2E5 772 aa11.61□□□□□ -0.55
TM4SF1-203ENST00000493298 LRRC37AA6NMS7 1700 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 COL4A5P29400 1685 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 EIF2S2P20042 333 aaKnown RBP11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 LTBP1Q14766 1721 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 WDR90Q96KV7 1748 aa11.6□□□□□ -0.55
TM4SF1-203ENST00000493298 KIF3CO14782 793 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 MYL6BP14649 208 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 RASSF7Q02833 373 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 CRY2Q49AN0 593 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 HDGFL1Q5TGJ6 251 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 CNBD1Q8NA66 436 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 NIP7Q9Y221 180 aaKnown RBP eCLIP11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 ABCC4O15439 1325 aa11.59□□□□□ -0.55
TM4SF1-203ENST00000493298 F6X3S4 739 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 NTSR2O95665 410 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 PDE3AQ14432 1141 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 ATF7IPQ6VMQ6 1270 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 ARHGAP45Q92619 1136 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 MYH3P11055 1940 aa11.58□□□□□ -0.56
TM4SF1-203ENST00000493298 H0YIN7 160 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 PDE6BP35913 854 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 C1QTNF8P60827 252 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 CCDC30Q5VVM6 783 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 SUSD4Q5VX71 490 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 C9orf131Q5VYM1 1079 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 STYK1Q6J9G0 422 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 FRAT1Q92837 279 aaPredicted RBP11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 DDX21Q9NR30 783 aaKnown RBP eCLIP11.57□□□□□ -0.56
TM4SF1-203ENST00000493298 FLIIQ13045 1269 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 ZKSCAN2Q63HK3 967 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 PRPF40BQ6NWY9 871 aaKnown RBP11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 OLFM4Q6UX06 510 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 NBPF5PQ86XG9 351 aaPredicted RBP11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 NUTM1Q86Y26 1132 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 ZNF652Q9Y2D9 606 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 LTBP3Q9NS15 1303 aa11.56□□□□□ -0.56
TM4SF1-203ENST00000493298 DUOX1Q9NRD9 1551 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 ADAMTSL1Q8N6G6 1762 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 ERFEQ4G0M1 354 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 COPS6Q7L5N1 327 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 SYNE4Q8N205 404 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 XAGE3Q8WTP9 111 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
TM4SF1-203ENST00000493298 POTECB2RU33 542 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 ZBTB7BO15156 539 aaPredicted RBP11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 C21orf2O43822 256 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 GPTP24298 496 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 HOXA10P31260 410 aaPredicted RBP11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 SLC10A5Q5PT55 438 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 INTS3Q68E01 1043 aaKnown RBP11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 TPTE2Q6XPS3 522 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 DZIP1LQ8IYY4 767 aaKnown RBP11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 NMRK2Q9NPI5 230 aa11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 DBF4Q9UBU7 674 aaPredicted RBP11.54□□□□□ -0.56
TM4SF1-203ENST00000493298 ZNF646O15015 1829 aaPredicted RBP11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 SCN4AP35499 1836 aa11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 ST5P78524 1137 aa11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 NLRP10Q86W26 655 aa11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 ZNF526Q8TF50 670 aaPredicted RBP11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 ZNF622Q969S3 477 aaKnown RBP eCLIP11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 PCDHB15Q9Y5E8 787 aa11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 KIF16BQ96L93 1317 aa11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
TM4SF1-203ENST00000493298 SPEF2Q9C093 1822 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 PI4KAP2A4QPH2 592 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 IGKV5-2P06315 115 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 NPR1P16066 1061 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 LMNB1P20700 586 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 TCIRG1Q13488 830 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 MVPQ14764 893 aaKnown RBP11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 BEND3Q5T5X7 828 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 KIF6Q6ZMV9 814 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 PI4KAP1Q8N8J0 262 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 CNKSR1Q969H4 720 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 ISCA1Q9BUE6 129 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 PTPRCP08575 1304 aa11.52□□□□□ -0.57
TM4SF1-203ENST00000493298 A0A1B0GUL6 1792 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms