RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-208ENST00000493207 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
RER1-208ENST00000493207 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
RER1-208ENST00000493207 PTPRCP08575 1304 aa21.46■■□□□ 1.03
RER1-208ENST00000493207 ABCC12Q96J65 1359 aa21.46■■□□□ 1.03
RER1-208ENST00000493207 COL11A2P13942 1736 aaPredicted RBP21.46■■□□□ 1.03
RER1-208ENST00000493207 DLEC1Q9Y238 1755 aa21.46■■□□□ 1.03
RER1-208ENST00000493207 A0A0G2JLW4 131 aa21.45■■□□□ 1.02
RER1-208ENST00000493207 IGKV5-2P06315 115 aa21.45■■□□□ 1.02
RER1-208ENST00000493207 TRIM28Q13263 835 aaKnown RBP21.45■■□□□ 1.02
RER1-208ENST00000493207 BRCA1P38398 1863 aaKnown RBP21.44■■□□□ 1.02
RER1-208ENST00000493207 BCAR3O75815 825 aa21.44■■□□□ 1.02
RER1-208ENST00000493207 DPEP1P16444 411 aa21.44■■□□□ 1.02
RER1-208ENST00000493207 CHRNA5P30532 468 aa21.44■■□□□ 1.02
RER1-208ENST00000493207 BRPF1P55201 1214 aaPredicted RBP21.44■■□□□ 1.02
RER1-208ENST00000493207 CWF19L2Q2TBE0 894 aaKnown RBP21.44■■□□□ 1.02
RER1-208ENST00000493207 CCDC191Q8NCU4 936 aa21.44■■□□□ 1.02
RER1-208ENST00000493207 CWC25Q9NXE8 425 aaPredicted RBP21.44■■□□□ 1.02
RER1-208ENST00000493207 NOB1Q9ULX3 412 aaKnown RBP21.44■■□□□ 1.02
RER1-208ENST00000493207 PDE6BP35913 854 aa21.43■■□□□ 1.02
RER1-208ENST00000493207 SLC4A10Q6U841 1118 aa21.43■■□□□ 1.02
RER1-208ENST00000493207 SYNE4Q8N205 404 aa21.43■■□□□ 1.02
RER1-208ENST00000493207 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
RER1-208ENST00000493207 DDX60Q8IY21 1712 aaKnown RBP21.43■■□□□ 1.02
RER1-208ENST00000493207 NEURL1BA8MQ27 555 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 LAMB2P55268 1798 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 GOLGB1Q14789 3259 aaKnown RBP21.42■■□□□ 1.02
RER1-208ENST00000493207 RTL5Q5HYW3 569 aaPredicted RBP21.42■■□□□ 1.02
RER1-208ENST00000493207 C2CD5Q86YS7 1000 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 FAM89AQ96GI7 184 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 KIF16BQ96L93 1317 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 WWC3Q9ULE0 1092 aa21.42■■□□□ 1.02
RER1-208ENST00000493207 RIC1Q4ADV7 1423 aa21.41■■□□□ 1.02
RER1-208ENST00000493207 LINS1Q8NG48 757 aa21.41■■□□□ 1.02
RER1-208ENST00000493207 H0YIN7 160 aa21.4■■□□□ 1.02
RER1-208ENST00000493207 KCNA3P22001 575 aa21.4■■□□□ 1.02
RER1-208ENST00000493207 BEND3Q5T5X7 828 aa21.4■■□□□ 1.02
RER1-208ENST00000493207 ZBTB38Q8NAP3 1195 aaPredicted RBP21.4■■□□□ 1.02
RER1-208ENST00000493207 CACNA1SQ13698 1873 aa21.4■■□□□ 1.02
RER1-208ENST00000493207 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
RER1-208ENST00000493207 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
RER1-208ENST00000493207 JARID2Q92833 1246 aaPredicted RBP21.39■■□□□ 1.01
RER1-208ENST00000493207 FRAT1Q92837 279 aaPredicted RBP21.39■■□□□ 1.01
RER1-208ENST00000493207 PCCAP05165 728 aaPredicted RBP21.38■■□□□ 1.01
RER1-208ENST00000493207 GCKRQ14397 625 aa21.38■■□□□ 1.01
RER1-208ENST00000493207 SLC10A5Q5PT55 438 aa21.38■■□□□ 1.01
RER1-208ENST00000493207 PDZRN3Q9UPQ7 1066 aa21.38■■□□□ 1.01
RER1-208ENST00000493207 KLRG2A4D1S0 409 aaPredicted RBP21.37■■□□□ 1.01
RER1-208ENST00000493207 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
RER1-208ENST00000493207 API5Q9BZZ5 524 aaKnown RBP21.37■■□□□ 1.01
RER1-208ENST00000493207 SRCIN1Q9C0H9 1055 aa21.37■■□□□ 1.01
RER1-208ENST00000493207 IRS4O14654 1257 aaPredicted RBP21.36■■□□□ 1.01
RER1-208ENST00000493207 SRGNP10124 158 aa21.36■■□□□ 1.01
RER1-208ENST00000493207 ARHGAP45Q92619 1136 aa21.36■■□□□ 1.01
RER1-208ENST00000493207 ZNF622Q969S3 477 aaKnown RBP eCLIP21.36■■□□□ 1.01
RER1-208ENST00000493207 NLRP3Q96P20 1036 aa21.36■■□□□ 1.01
RER1-208ENST00000493207 PIM2Q9P1W9 311 aa21.36■■□□□ 1.01
RER1-208ENST00000493207 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
RER1-208ENST00000493207 ALDH1L1O75891 902 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 GPR162Q16538 588 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 UBE3BQ7Z3V4 1068 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 MASTLQ96GX5 879 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 RCAN3Q9UKA8 241 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 MYH3P11055 1940 aa21.35■■□□□ 1.01
RER1-208ENST00000493207 NPR1P16066 1061 aa21.34■■□□□ 1.01
RER1-208ENST00000493207 CRY2Q49AN0 593 aa21.34■■□□□ 1.01
RER1-208ENST00000493207 BCS1LQ9Y276 419 aa21.34■■□□□ 1.01
RER1-208ENST00000493207 ARFGEF1Q9Y6D6 1849 aa21.34■■□□□ 1.01
RER1-208ENST00000493207 CDHR2Q9BYE9 1310 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 H7C1W4 665 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 TRIM27P14373 513 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 YBX3P16989 372 aaKnown RBP eCLIP21.33■■□□□ 1.01
RER1-208ENST00000493207 DALRD3Q5D0E6 543 aaKnown RBP21.33■■□□□ 1.01
RER1-208ENST00000493207 STYK1Q6J9G0 422 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 RPGRQ92834 1020 aaKnown RBP21.33■■□□□ 1.01
RER1-208ENST00000493207 TNNQ9UQP3 1299 aa21.33■■□□□ 1.01
RER1-208ENST00000493207 DCAF8L1A6NGE4 600 aa21.32■■□□□ 1
RER1-208ENST00000493207 ZKSCAN2Q63HK3 967 aa21.32■■□□□ 1
RER1-208ENST00000493207 TTLL6Q8N841 843 aa21.32■■□□□ 1
RER1-208ENST00000493207 SLX4Q8IY92 1834 aa21.32■■□□□ 1
RER1-208ENST00000493207 ABCC4O15439 1325 aa21.31■■□□□ 1
RER1-208ENST00000493207 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
RER1-208ENST00000493207 CNKSR1Q969H4 720 aa21.31■■□□□ 1
RER1-208ENST00000493207 C9orf78Q9NZ63 289 aaPredicted RBP21.31■■□□□ 1
RER1-208ENST00000493207 UTRNP46939 3433 aa21.3■■□□□ 1
RER1-208ENST00000493207 TAF1P21675 1872 aa21.3■■□□□ 1
RER1-208ENST00000493207 GRM8O00222 908 aa21.3■■□□□ 1
RER1-208ENST00000493207 PDE8AO60658 829 aa21.3■■□□□ 1
RER1-208ENST00000493207 CCT4P50991 539 aaKnown RBP21.3■■□□□ 1
RER1-208ENST00000493207 CASP7P55210 303 aa21.3■■□□□ 1
RER1-208ENST00000493207 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
RER1-208ENST00000493207 RBM17Q96I25 401 aaKnown RBP21.3■■□□□ 1
RER1-208ENST00000493207 ALDH1B1P30837 517 aa21.28■■□□□ 1
RER1-208ENST00000493207 HOXA10P31260 410 aaPredicted RBP21.28■■□□□ 1
RER1-208ENST00000493207 SF3B3Q15393 1217 aaKnown RBP21.28■■□□□ 1
RER1-208ENST00000493207 PRPF40BQ6NWY9 871 aaKnown RBP21.28■■□□□ 1
RER1-208ENST00000493207 CTSWP56202 376 aa21.27■■□□□ 1
RER1-208ENST00000493207 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
RER1-208ENST00000493207 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms