RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
MSH6-208ENST00000493177 ADCY9O60503 1353 aa17.09■□□□□ 0.33
MSH6-208ENST00000493177 KIF16BQ96L93 1317 aa17.08■□□□□ 0.32
MSH6-208ENST00000493177 PROSER3Q2NL68 480 aa17.08■□□□□ 0.32
MSH6-208ENST00000493177 MASTLQ96GX5 879 aa17.08■□□□□ 0.32
MSH6-208ENST00000493177 HYPKQ9NX55 129 aa17.08■□□□□ 0.32
MSH6-208ENST00000493177 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
MSH6-208ENST00000493177 RASSF7Q02833 373 aa17.07■□□□□ 0.32
MSH6-208ENST00000493177 PDIA6Q15084 440 aa17.07■□□□□ 0.32
MSH6-208ENST00000493177 GIGYF2Q6Y7W6 1299 aaKnown RBP17.07■□□□□ 0.32
MSH6-208ENST00000493177 SLX4Q8IY92 1834 aa17.07■□□□□ 0.32
MSH6-208ENST00000493177 IPO8O15397 1037 aaKnown RBP17.06■□□□□ 0.32
MSH6-208ENST00000493177 C21orf2O43822 256 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 PLIN1O60240 522 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 RRP1P56182 461 aaKnown RBP17.06■□□□□ 0.32
MSH6-208ENST00000493177 FLIIQ13045 1269 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 STYK1Q6J9G0 422 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 COPS6Q7L5N1 327 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 G2E3Q7L622 706 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 PPP1R42Q7Z4L9 355 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 NUTM1Q86Y26 1132 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 PHAXQ9H814 394 aaKnown RBP17.06■□□□□ 0.32
MSH6-208ENST00000493177 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
MSH6-208ENST00000493177 TNRC6CQ9HCJ0 1690 aaKnown RBP17.05■□□□□ 0.32
MSH6-208ENST00000493177 SRGNP10124 158 aa17.05■□□□□ 0.32
MSH6-208ENST00000493177 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
MSH6-208ENST00000493177 FKBP5Q13451 457 aaPredicted RBP17.05■□□□□ 0.32
MSH6-208ENST00000493177 HSP90AB3PQ58FF7 597 aa17.05■□□□□ 0.32
MSH6-208ENST00000493177 ZKSCAN2Q63HK3 967 aa17.05■□□□□ 0.32
MSH6-208ENST00000493177 UTRNP46939 3433 aa17.05■□□□□ 0.32
MSH6-208ENST00000493177 FER1L6Q2WGJ9 1857 aa17.04■□□□□ 0.32
MSH6-208ENST00000493177 NPR1P16066 1061 aa17.04■□□□□ 0.32
MSH6-208ENST00000493177 C1QTNF8P60827 252 aa17.04■□□□□ 0.32
MSH6-208ENST00000493177 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
MSH6-208ENST00000493177 PTPRCP08575 1304 aa17.03■□□□□ 0.32
MSH6-208ENST00000493177 UBN2Q6ZU65 1347 aa17.03■□□□□ 0.32
MSH6-208ENST00000493177 DDX58O95786 925 aaKnown RBP17.03■□□□□ 0.32
MSH6-208ENST00000493177 ERFEQ4G0M1 354 aa17.03■□□□□ 0.32
MSH6-208ENST00000493177 SOGA3Q5TF21 947 aa17.03■□□□□ 0.32
MSH6-208ENST00000493177 PRPF40BQ6NWY9 871 aaKnown RBP17.03■□□□□ 0.32
MSH6-208ENST00000493177 RPGRQ92834 1020 aaKnown RBP17.03■□□□□ 0.32
MSH6-208ENST00000493177 API5Q9BZZ5 524 aaKnown RBP17.03■□□□□ 0.32
MSH6-208ENST00000493177 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.32
MSH6-208ENST00000493177 DICER1Q9UPY3 1922 aaKnown RBP17.02■□□□□ 0.32
MSH6-208ENST00000493177 LMNB1P20700 586 aa17.02■□□□□ 0.32
MSH6-208ENST00000493177 SUSD4Q5VX71 490 aa17.02■□□□□ 0.32
MSH6-208ENST00000493177 ATF7IPQ6VMQ6 1270 aa17.02■□□□□ 0.32
MSH6-208ENST00000493177 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.32
MSH6-208ENST00000493177 CACNA1FO60840 1977 aa17.02■□□□□ 0.31
MSH6-208ENST00000493177 ABCC12Q96J65 1359 aa17.02■□□□□ 0.31
MSH6-208ENST00000493177 ALDH1B1P30837 517 aa17.01■□□□□ 0.31
MSH6-208ENST00000493177 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
MSH6-208ENST00000493177 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
MSH6-208ENST00000493177 UTP14AQ9BVJ6 771 aaKnown RBP17.01■□□□□ 0.31
MSH6-208ENST00000493177 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
MSH6-208ENST00000493177 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
MSH6-208ENST00000493177 LRP10Q7Z4F1 713 aa17■□□□□ 0.31
MSH6-208ENST00000493177 RIC3Q7Z5B4 369 aa17■□□□□ 0.31
MSH6-208ENST00000493177 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
MSH6-208ENST00000493177 CLUAP1Q96AJ1 413 aa17■□□□□ 0.31
MSH6-208ENST00000493177 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
MSH6-208ENST00000493177 NTSR2O95665 410 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 MS4A1P11836 297 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 TRIM27P14373 513 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 CCDC93Q567U6 631 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 ANKRD13DQ6ZTN6 518 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 TNNQ9UQP3 1299 aa16.99■□□□□ 0.31
MSH6-208ENST00000493177 RNF123Q5XPI4 1314 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 LAMB2P55268 1798 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 F6X3S4 739 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 NFKBIEO00221 500 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 TCIRG1Q13488 830 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 KSR2Q6VAB6 950 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
MSH6-208ENST00000493177 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 RBM17Q96I25 401 aaKnown RBP16.98■□□□□ 0.31
MSH6-208ENST00000493177 NLRP3Q96P20 1036 aa16.98■□□□□ 0.31
MSH6-208ENST00000493177 TRMT112Q9UI30 125 aaKnown RBP16.98■□□□□ 0.31
MSH6-208ENST00000493177 RIC1Q4ADV7 1423 aa16.97■□□□□ 0.31
MSH6-208ENST00000493177 NEFLP07196 543 aa16.97■□□□□ 0.31
MSH6-208ENST00000493177 IRX6P78412 446 aaPredicted RBP16.97■□□□□ 0.31
MSH6-208ENST00000493177 DNAAF4Q8WXU2 420 aa16.97■□□□□ 0.31
MSH6-208ENST00000493177 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
MSH6-208ENST00000493177 MAP3K2Q9Y2U5 619 aa16.97■□□□□ 0.31
MSH6-208ENST00000493177 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
MSH6-208ENST00000493177 KLRG2A4D1S0 409 aaPredicted RBP16.96■□□□□ 0.31
MSH6-208ENST00000493177 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
MSH6-208ENST00000493177 NLRP10Q86W26 655 aa16.96■□□□□ 0.31
MSH6-208ENST00000493177 PANK1Q8TE04 598 aa16.96■□□□□ 0.31
MSH6-208ENST00000493177 NMRK2Q9NPI5 230 aa16.96■□□□□ 0.31
MSH6-208ENST00000493177 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
MSH6-208ENST00000493177 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 KIF3CO14782 793 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 PDE3AQ14432 1141 aa16.94■□□□□ 0.3
MSH6-208ENST00000493177 CRY2Q49AN0 593 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms