RNA–Protein interactions for RNA: ENST00000493109.2

COL12A1-209, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-209ENST00000493109 TRAPPC3LQ5T215 181 aa11.37□□□□□ -0.59
COL12A1-209ENST00000493109 ARTNQ5T4W7 220 aa11.37□□□□□ -0.59
COL12A1-209ENST00000493109 BTLAQ7Z6A9 289 aa11.37□□□□□ -0.59
COL12A1-209ENST00000493109 ALDH16A1Q8IZ83 802 aa11.37□□□□□ -0.59
COL12A1-209ENST00000493109 LARGE2Q8N3Y3 721 aa11.37□□□□□ -0.59
COL12A1-209ENST00000493109 ATP9BO43861 1147 aa11.36□□□□□ -0.59
COL12A1-209ENST00000493109 PPP1R12BO60237 982 aaPredicted RBP11.36□□□□□ -0.59
COL12A1-209ENST00000493109 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
COL12A1-209ENST00000493109 GRNP28799 593 aaKnown RBP11.35□□□□□ -0.59
COL12A1-209ENST00000493109 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
COL12A1-209ENST00000493109 ZNF594Q96JF6 807 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-209ENST00000493109 C2orf49Q9BVC5 232 aaPredicted RBP11.35□□□□□ -0.59
COL12A1-209ENST00000493109 UBE2OQ9C0C9 1292 aaKnown RBP11.35□□□□□ -0.59
COL12A1-209ENST00000493109 PALM3A6NDB9 673 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-209ENST00000493109 C9orf172C9J069 976 aa11.34□□□□□ -0.59
COL12A1-209ENST00000493109 ELNP15502 786 aa11.34□□□□□ -0.59
COL12A1-209ENST00000493109 HDGFL1Q5TGJ6 251 aa11.34□□□□□ -0.59
COL12A1-209ENST00000493109 NUDT8Q8WV74 236 aa11.34□□□□□ -0.59
COL12A1-209ENST00000493109 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-209ENST00000493109 AFF1P51825 1210 aaKnown RBP11.33□□□□□ -0.6
COL12A1-209ENST00000493109 ZFP64Q9NPA5 681 aa11.33□□□□□ -0.6
COL12A1-209ENST00000493109 DNAJB12Q9NXW2 375 aaKnown RBP11.33□□□□□ -0.6
COL12A1-209ENST00000493109 CHMP3Q9Y3E7 222 aa11.33□□□□□ -0.6
COL12A1-209ENST00000493109 ATAD2Q6PL18 1390 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 TXNRD3Q86VQ6 643 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 LENG1Q96BZ8 264 aaPredicted RBP11.32□□□□□ -0.6
COL12A1-209ENST00000493109 GSX2Q9BZM3 304 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 IGFLR1Q9H665 355 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 BCS1LQ9Y276 419 aa11.32□□□□□ -0.6
COL12A1-209ENST00000493109 H2AFB1P0C5Y9 115 aa11.31□□□□□ -0.6
COL12A1-209ENST00000493109 H2AFB2P0C5Z0 115 aa11.31□□□□□ -0.6
COL12A1-209ENST00000493109 WWC1Q8IX03 1113 aa11.31□□□□□ -0.6
COL12A1-209ENST00000493109 SSBP4Q9BWG4 385 aaPredicted RBP11.31□□□□□ -0.6
COL12A1-209ENST00000493109 DMGDHQ9UI17 866 aaKnown RBP11.31□□□□□ -0.6
COL12A1-209ENST00000493109 PSAPL1Q6NUJ1 521 aa11.3□□□□□ -0.6
COL12A1-209ENST00000493109 NGLY1Q96IV0 654 aa11.3□□□□□ -0.6
COL12A1-209ENST00000493109 FMR1NBQ8N0W7 255 aaPredicted RBP11.29□□□□□ -0.6
COL12A1-209ENST00000493109 GAS2L2Q8NHY3 880 aa11.29□□□□□ -0.6
COL12A1-209ENST00000493109 SCG3Q8WXD2 468 aaKnown RBP11.29□□□□□ -0.6
COL12A1-209ENST00000493109 IER5Q5VY09 327 aa11.28□□□□□ -0.6
COL12A1-209ENST00000493109 RAD21O60216 631 aa11.27□□□□□ -0.61
COL12A1-209ENST00000493109 NFKB1P19838 968 aa11.27□□□□□ -0.61
COL12A1-209ENST00000493109 PLAURQ03405 335 aa11.27□□□□□ -0.61
COL12A1-209ENST00000493109 GRIK5Q16478 980 aa11.27□□□□□ -0.61
COL12A1-209ENST00000493109 DMRTC2Q8IXT2 367 aaPredicted RBP11.27□□□□□ -0.61
COL12A1-209ENST00000493109 KRTAP4-12Q9BQ66 201 aa11.27□□□□□ -0.61
COL12A1-209ENST00000493109 LGR5O75473 907 aa11.26□□□□□ -0.61
COL12A1-209ENST00000493109 RAC1P63000 192 aa11.26□□□□□ -0.61
COL12A1-209ENST00000493109 KRTAP1-3Q8IUG1 177 aa11.26□□□□□ -0.61
COL12A1-209ENST00000493109 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-209ENST00000493109 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-209ENST00000493109 TGFBR3LH3BV60 316 aa11.25□□□□□ -0.61
COL12A1-209ENST00000493109 NRG1Q02297 640 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-209ENST00000493109 EFCC1Q9HA90 598 aa11.25□□□□□ -0.61
COL12A1-209ENST00000493109 UBTFP17480 764 aaKnown RBP11.24□□□□□ -0.61
COL12A1-209ENST00000493109 CCINQ13939 588 aa11.24□□□□□ -0.61
COL12A1-209ENST00000493109 RTN1Q16799 776 aa11.24□□□□□ -0.61
COL12A1-209ENST00000493109 TP53INP1Q96A56 240 aa11.24□□□□□ -0.61
COL12A1-209ENST00000493109 LPIN3Q9BQK8 851 aa11.24□□□□□ -0.61
COL12A1-209ENST00000493109 ZFATQ9P243 1243 aa11.24□□□□□ -0.61
COL12A1-209ENST00000493109 ZBTB42B2RXF5 422 aa11.23□□□□□ -0.61
COL12A1-209ENST00000493109 RASA1P20936 1047 aa11.23□□□□□ -0.61
COL12A1-209ENST00000493109 SEC13P55735 322 aa11.23□□□□□ -0.61
COL12A1-209ENST00000493109 LRP8Q14114 963 aa11.23□□□□□ -0.61
COL12A1-209ENST00000493109 HIF1AQ16665 826 aa11.22□□□□□ -0.61
COL12A1-209ENST00000493109 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
COL12A1-209ENST00000493109 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-209ENST00000493109 RGS9O75916 674 aaPredicted RBP11.21□□□□□ -0.61
COL12A1-209ENST00000493109 MSL1Q68DK7 614 aa11.21□□□□□ -0.61
COL12A1-209ENST00000493109 TFIP11Q9UBB9 837 aaKnown RBP11.21□□□□□ -0.61
COL12A1-209ENST00000493109 USP21Q9UK80 565 aa11.21□□□□□ -0.61
COL12A1-209ENST00000493109 CPB1P15086 417 aa11.2□□□□□ -0.62
COL12A1-209ENST00000493109 INPP5BP32019 993 aa11.2□□□□□ -0.62
COL12A1-209ENST00000493109 CRTC2Q53ET0 693 aaPredicted RBP11.2□□□□□ -0.62
COL12A1-209ENST00000493109 FAM35AQ86V20 835 aa11.2□□□□□ -0.62
COL12A1-209ENST00000493109 PNMA5Q96PV4 448 aa11.2□□□□□ -0.62
COL12A1-209ENST00000493109 PERM1Q5SV97 790 aa11.19□□□□□ -0.62
COL12A1-209ENST00000493109 KLK14Q9P0G3 267 aa11.19□□□□□ -0.62
COL12A1-209ENST00000493109 FBXO11Q86XK2 927 aa11.18□□□□□ -0.62
COL12A1-209ENST00000493109 GLMNQ92990 594 aa11.18□□□□□ -0.62
COL12A1-209ENST00000493109 MAP3K6O95382 1288 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 NOS3P29474 1203 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 IDH3AP50213 366 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 FLIIQ13045 1269 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 PTK7Q13308 1070 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 FNBP4Q8N3X1 1017 aaPredicted RBP11.17□□□□□ -0.62
COL12A1-209ENST00000493109 WFDC12Q8WWY7 111 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 FRRS1LQ9P0K9 344 aa11.17□□□□□ -0.62
COL12A1-209ENST00000493109 RBM19Q9Y4C8 960 aaKnown RBP11.17□□□□□ -0.62
COL12A1-209ENST00000493109 IGFBP4P22692 258 aa11.16□□□□□ -0.62
COL12A1-209ENST00000493109 TARSP26639 723 aaKnown RBP11.16□□□□□ -0.62
COL12A1-209ENST00000493109 MLLT1Q03111 559 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-209ENST00000493109 DPYDQ12882 1025 aa11.16□□□□□ -0.62
COL12A1-209ENST00000493109 KANK4Q5T7N3 995 aaPredicted RBP11.16□□□□□ -0.62
COL12A1-209ENST00000493109 DHX32Q7L7V1 743 aaKnown RBP11.16□□□□□ -0.62
COL12A1-209ENST00000493109 KRT25Q7Z3Z0 450 aa11.16□□□□□ -0.62
COL12A1-209ENST00000493109 NBPF11Q86T75 865 aa11.16□□□□□ -0.62
COL12A1-209ENST00000493109 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms