RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 PRKD2Q9BZL6 878 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 ADGRB2O60241 1585 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 SORBS3O60504 671 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 GNRH1P01148 92 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 CANXP27824 592 aaKnown RBP4.51□□□□□ -1.69
SNX13-209ENST00000492626 KCNC4Q03721 635 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 TLR1Q15399 786 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 C8orf37Q96NL8 207 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 CCSER2Q9H7U1 834 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 DISP2A7MBM2 1401 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 HIF1AQ16665 826 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 NGLY1Q96IV0 654 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 NLRP3Q96P20 1036 aa4.51□□□□□ -1.69
SNX13-209ENST00000492626 INHAP05111 366 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 CDK11BP21127 795 aaKnown RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 SLC9A9Q8IVB4 645 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 TSPAN10Q9H1Z9 355 aaPredicted RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 CDK11AQ9UQ88 783 aaPredicted RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 EMILIN1Q9Y6C2 1016 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 PLXNC1O60486 1568 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 ROBO1Q9Y6N7 1651 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 RPLP1P05386 114 aaKnown RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 NEUROD4Q9HD90 331 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 PARD3Q8TEW0 1356 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 COL22A1Q8NFW1 1626 aaPredicted RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 ITSN2Q9NZM3 1697 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 SETBP1Q9Y6X0 1596 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 LOC105371045A0A1W2PR82 267 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 A6NJY4 79 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 PRPF40AO75400 957 aaKnown RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 EIF1AXP47813 144 aaKnown RBP4.5□□□□□ -1.69
SNX13-209ENST00000492626 ERVK-9P63128 1117 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 NAALADL2Q58DX5 795 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 CABP1Q9NZU7 370 aa4.5□□□□□ -1.69
SNX13-209ENST00000492626 C4orf48Q5BLP8 95 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 ALG1LQ6GMV1 187 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 UBXN4Q92575 508 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 BCL9LQ86UU0 1499 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 SERTM1A2A2V5 107 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 PRELPP51888 382 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 NR5A1Q13285 461 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 TJAP1Q5JTD0 557 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 TMC7Q7Z402 723 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 IGSF5Q9NSI5 407 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 MARF1Q9Y4F3 1742 aaKnown RBP4.49□□□□□ -1.69
SNX13-209ENST00000492626 WASLO00401 505 aaPredicted RBP4.49□□□□□ -1.69
SNX13-209ENST00000492626 ARHGAP4P98171 946 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 DNM1Q05193 864 aaKnown RBP4.49□□□□□ -1.69
SNX13-209ENST00000492626 EHHADHQ08426 723 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 ANKLE1Q8NAG6 615 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 ABCA6Q8N139 1617 aa4.49□□□□□ -1.69
SNX13-209ENST00000492626 TIAM1Q13009 1591 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 SCTRP47872 440 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 FBXO33Q7Z6M2 555 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 RNF34Q969K3 372 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 ARHGEF10LQ9HCE6 1279 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 WASF2Q9Y6W5 498 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 DKK1O94907 266 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 GNASQ5JWF2 1037 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 KIAA1210Q9ULL0 1709 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 RPRD2Q5VT52 1461 aaKnown RBP4.48□□□□□ -1.69
SNX13-209ENST00000492626 TMEM229AB2RXF0 380 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 RPIAP49247 311 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 RC3H1Q5TC82 1133 aaKnown RBP4.48□□□□□ -1.69
SNX13-209ENST00000492626 TMEM214Q6NUQ4 689 aaKnown RBP4.48□□□□□ -1.69
SNX13-209ENST00000492626 VPS37DQ86XT2 251 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 NKX2-3Q8TAU0 364 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 DUSP9Q99956 384 aaKnown RBP4.48□□□□□ -1.69
SNX13-209ENST00000492626 TMPRSS4Q9NRS4 437 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 PTCH1Q13635 1447 aa4.48□□□□□ -1.69
SNX13-209ENST00000492626 P4HBP07237 508 aaKnown RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 PPP1R26Q5T8A7 1209 aaPredicted RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 ZNF784Q8NCA9 323 aaPredicted RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 TANGO6Q9C0B7 1094 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 OSBPL3Q9H4L5 887 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 BLMP54132 1417 aaPredicted RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 ZNF76P36508 570 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 SMTNP53814 917 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 C8orf34Q49A92 452 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 FRMD6Q96NE9 622 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 NIFKQ9BYG3 293 aaKnown RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 BACH2Q9BYV9 841 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 NIF3L1Q9GZT8 377 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 SPG7Q9UQ90 795 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 STRCP1A6NGW2 1772 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 TREHO43280 583 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 RAPGEF3O95398 923 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 MZF1P28698 734 aaPredicted RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 HSPA2P54652 639 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 TBCELQ5QJ74 424 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 ETNK1Q9HBU6 452 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 RAB6BQ9NRW1 208 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 SCHIP1Q9P0W5 487 aaPredicted RBP4.47□□□□□ -1.69
SNX13-209ENST00000492626 PARP2Q9UGN5 583 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 RREB1Q92766 1687 aa4.47□□□□□ -1.69
SNX13-209ENST00000492626 MEN1O00255 615 aa4.46□□□□□ -1.69
SNX13-209ENST00000492626 NCLP19338 710 aaKnown RBP4.46□□□□□ -1.69
SNX13-209ENST00000492626 STAG2Q8N3U4 1231 aa4.46□□□□□ -1.69
SNX13-209ENST00000492626 RECKO95980 971 aa4.46□□□□□ -1.7
SNX13-209ENST00000492626 NLRP2Q9NX02 1062 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms