RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 FAM161AQ3B820 660 aa18.29■□□□□ 0.52
GPNMB-213ENST00000492512 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
GPNMB-213ENST00000492512 NUTM1Q86Y26 1132 aa18.29■□□□□ 0.52
GPNMB-213ENST00000492512 RPGRQ92834 1020 aaKnown RBP18.29■□□□□ 0.52
GPNMB-213ENST00000492512 LAMB4A4D0S4 1761 aa18.29■□□□□ 0.52
GPNMB-213ENST00000492512 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
GPNMB-213ENST00000492512 U2AF1L5P0DN76 240 aaPredicted RBP18.28■□□□□ 0.52
GPNMB-213ENST00000492512 ECE1P42892 770 aa18.28■□□□□ 0.52
GPNMB-213ENST00000492512 U2AF1Q01081 240 aaKnown RBP eCLIP18.28■□□□□ 0.52
GPNMB-213ENST00000492512 GRM1Q13255 1194 aa18.28■□□□□ 0.52
GPNMB-213ENST00000492512 LARGE2Q8N3Y3 721 aa18.28■□□□□ 0.52
GPNMB-213ENST00000492512 CAPNS2Q96L46 248 aa18.28■□□□□ 0.52
GPNMB-213ENST00000492512 COL4A5P29400 1685 aa18.28■□□□□ 0.52
GPNMB-213ENST00000492512 THSD7BQ9C0I4 1608 aa18.27■□□□□ 0.52
GPNMB-213ENST00000492512 EPS15P42566 896 aa18.27■□□□□ 0.52
GPNMB-213ENST00000492512 SCNN1DP51172 638 aa18.27■□□□□ 0.52
GPNMB-213ENST00000492512 TAF7Q15545 349 aaPredicted RBP18.27■□□□□ 0.52
GPNMB-213ENST00000492512 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
GPNMB-213ENST00000492512 NGEFQ8N5V2 710 aa18.27■□□□□ 0.52
GPNMB-213ENST00000492512 HTATSF1O43719 755 aaKnown RBP18.26■□□□□ 0.51
GPNMB-213ENST00000492512 FMR1Q06787 632 aaKnown RBP eCLIP18.26■□□□□ 0.51
GPNMB-213ENST00000492512 CYP4F22Q6NT55 531 aa18.26■□□□□ 0.51
GPNMB-213ENST00000492512 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
GPNMB-213ENST00000492512 GPR101Q96P66 508 aaPredicted RBP18.26■□□□□ 0.51
GPNMB-213ENST00000492512 ERVV-1B6SEH8 477 aa18.25■□□□□ 0.51
GPNMB-213ENST00000492512 SLC34A2O95436 690 aa18.25■□□□□ 0.51
GPNMB-213ENST00000492512 HOXA10P31260 410 aaPredicted RBP18.25■□□□□ 0.51
GPNMB-213ENST00000492512 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
GPNMB-213ENST00000492512 MAP3K15Q6ZN16 1313 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 TRAF5O00463 557 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
GPNMB-213ENST00000492512 GPTP24298 496 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 KIF6Q6ZMV9 814 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 NIM1KQ8IY84 436 aa18.24■□□□□ 0.51
GPNMB-213ENST00000492512 RBM17Q96I25 401 aaKnown RBP18.24■□□□□ 0.51
GPNMB-213ENST00000492512 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
GPNMB-213ENST00000492512 PPEF1O14829 653 aaPredicted RBP18.23■□□□□ 0.51
GPNMB-213ENST00000492512 CST9Q5W186 159 aa18.23■□□□□ 0.51
GPNMB-213ENST00000492512 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
GPNMB-213ENST00000492512 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
GPNMB-213ENST00000492512 TLL2Q9Y6L7 1015 aa18.23■□□□□ 0.51
GPNMB-213ENST00000492512 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
GPNMB-213ENST00000492512 TTLL7Q6ZT98 887 aa18.22■□□□□ 0.51
GPNMB-213ENST00000492512 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
GPNMB-213ENST00000492512 PPIP5K2O43314 1243 aa18.21■□□□□ 0.51
GPNMB-213ENST00000492512 MLLT1Q03111 559 aaPredicted RBP18.21■□□□□ 0.51
GPNMB-213ENST00000492512 ZBTB3Q9H5J0 574 aa18.21■□□□□ 0.51
GPNMB-213ENST00000492512 DLG5Q8TDM6 1919 aa18.21■□□□□ 0.51
GPNMB-213ENST00000492512 UBN2Q6ZU65 1347 aa18.21■□□□□ 0.51
GPNMB-213ENST00000492512 KDM3BQ7LBC6 1761 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 MYL6BP14649 208 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 MAP2K2P36507 400 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 AOC3Q16853 763 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 SUSD4Q5VX71 490 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 SLC51AQ86UW1 340 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 PNISRQ8TF01 805 aaKnown RBP18.2■□□□□ 0.5
GPNMB-213ENST00000492512 ADARB2Q9NS39 739 aaKnown RBP18.2■□□□□ 0.5
GPNMB-213ENST00000492512 GPRC5DQ9NZD1 345 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 TSKSQ9UJT2 592 aa18.2■□□□□ 0.5
GPNMB-213ENST00000492512 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
GPNMB-213ENST00000492512 AOC2O75106 756 aa18.19■□□□□ 0.5
GPNMB-213ENST00000492512 PPP2R1AP30153 589 aa18.19■□□□□ 0.5
GPNMB-213ENST00000492512 CELF2O95319 508 aaKnown RBP18.18■□□□□ 0.5
GPNMB-213ENST00000492512 NTSR2O95665 410 aa18.18■□□□□ 0.5
GPNMB-213ENST00000492512 NEFMP07197 916 aa18.18■□□□□ 0.5
GPNMB-213ENST00000492512 VPS33BQ9H267 617 aa18.18■□□□□ 0.5
GPNMB-213ENST00000492512 CA12O43570 354 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 RGS19P49795 217 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 EIF4A1P60842 406 aaKnown RBP18.17■□□□□ 0.5
GPNMB-213ENST00000492512 C3orf67Q6ZVT6 689 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 PPP1R42Q7Z4L9 355 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 SAPCD2Q86UD0 394 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 ZNF34Q8IZ26 560 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 NLRP3Q96P20 1036 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 ZNRF3Q9ULT6 936 aa18.17■□□□□ 0.5
GPNMB-213ENST00000492512 CXCL9Q07325 125 aa18.16■□□□□ 0.5
GPNMB-213ENST00000492512 GIGYF2Q6Y7W6 1299 aaKnown RBP18.16■□□□□ 0.5
GPNMB-213ENST00000492512 SUPT20HQ8NEM7 779 aa18.16■□□□□ 0.5
GPNMB-213ENST00000492512 CFAP44Q96MT7 982 aa18.16■□□□□ 0.5
GPNMB-213ENST00000492512 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
GPNMB-213ENST00000492512 GMPSP49915 693 aaPredicted RBP18.15■□□□□ 0.5
GPNMB-213ENST00000492512 PARP10Q53GL7 1025 aa18.15■□□□□ 0.5
GPNMB-213ENST00000492512 GLIS2Q9BZE0 524 aaPredicted RBP18.15■□□□□ 0.5
GPNMB-213ENST00000492512 HHIPL1Q96JK4 782 aa18.14■□□□□ 0.49
GPNMB-213ENST00000492512 BRPF1P55201 1214 aaPredicted RBP18.13■□□□□ 0.49
GPNMB-213ENST00000492512 CIAPIN1Q6FI81 312 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 DPP8Q6V1X1 898 aaPredicted RBP18.13■□□□□ 0.49
GPNMB-213ENST00000492512 BCL2L13Q9BXK5 485 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 RTFDC1Q9BY42 306 aaPredicted RBP18.13■□□□□ 0.49
GPNMB-213ENST00000492512 MCOLN1Q9GZU1 580 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 ZNF408Q9H9D4 720 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 ABCC4O15439 1325 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 ERBB4Q15303 1308 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
GPNMB-213ENST00000492512 ZC3H15Q8WU90 426 aaKnown RBP18.12■□□□□ 0.49
GPNMB-213ENST00000492512 UTP14AQ9BVJ6 771 aaKnown RBP18.12■□□□□ 0.49
GPNMB-213ENST00000492512 PGAP2Q9UHJ9 254 aa18.12■□□□□ 0.49
GPNMB-213ENST00000492512 BBOX1O75936 387 aa18.11■□□□□ 0.49
GPNMB-213ENST00000492512 RAD17O75943 681 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms