RNA–Protein interactions for RNA: ENST00000492118.2

ATF3-209, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 2,103 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-209ENST00000492118 CCDC24Q8N4L8 307 aa13.5□□□□□ -0.25
ATF3-209ENST00000492118 TCIRG1Q13488 830 aa13.49□□□□□ -0.25
ATF3-209ENST00000492118 GCKRQ14397 625 aa13.49□□□□□ -0.25
ATF3-209ENST00000492118 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
ATF3-209ENST00000492118 NIP7Q9Y221 180 aaKnown RBP eCLIP13.49□□□□□ -0.25
ATF3-209ENST00000492118 AFDNP55196 1824 aaKnown RBP13.49□□□□□ -0.25
ATF3-209ENST00000492118 CCDC85AQ96PX6 553 aaPredicted RBP13.49□□□□□ -0.25
ATF3-209ENST00000492118 GRM8O00222 908 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 IGHDP01880 384 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.48□□□□□ -0.25
ATF3-209ENST00000492118 SKAP1Q86WV1 359 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 PDGFDQ9GZP0 370 aaPredicted RBP13.48□□□□□ -0.25
ATF3-209ENST00000492118 CWC25Q9NXE8 425 aaPredicted RBP13.48□□□□□ -0.25
ATF3-209ENST00000492118 NUP98P52948 1817 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 NUP188Q5SRE5 1749 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 NAP1L5Q96NT1 182 aaPredicted RBP13.48□□□□□ -0.25
ATF3-209ENST00000492118 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
ATF3-209ENST00000492118 ZNF831Q5JPB2 1677 aa13.47□□□□□ -0.25
ATF3-209ENST00000492118 APBB1O00213 710 aa13.47□□□□□ -0.25
ATF3-209ENST00000492118 COL23A1Q86Y22 540 aaPredicted RBP13.47□□□□□ -0.25
ATF3-209ENST00000492118 NUTM1Q86Y26 1132 aa13.47□□□□□ -0.25
ATF3-209ENST00000492118 UPF1Q92900 1129 aaKnown RBP eCLIP13.47□□□□□ -0.258e-7■■■■■ 29.4
ATF3-209ENST00000492118 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
ATF3-209ENST00000492118 TRMT112Q9UI30 125 aaKnown RBP13.47□□□□□ -0.25
ATF3-209ENST00000492118 NPHP1O15259 732 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 ALDH1L1O75891 902 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 GNAI2P04899 355 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 NLRP10Q86W26 655 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 SUCLG2Q96I99 432 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 NARFQ9UHQ1 456 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 UBR3Q6ZT12 1888 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 PXDNLA1KZ92 1463 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 ATP10DQ9P241 1426 aa13.46□□□□□ -0.25
ATF3-209ENST00000492118 ERVV-1B6SEH8 477 aa13.46□□□□□ -0.26
ATF3-209ENST00000492118 GNAI3P08754 354 aa13.46□□□□□ -0.26
ATF3-209ENST00000492118 SUSD4Q5VX71 490 aa13.46□□□□□ -0.26
ATF3-209ENST00000492118 RREB1Q92766 1687 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 CICQ96RK0 1608 aaPredicted RBP13.45□□□□□ -0.26
ATF3-209ENST00000492118 USP42Q9H9J4 1324 aaKnown RBP13.45□□□□□ -0.26
ATF3-209ENST00000492118 PAXIP1Q6ZW49 1069 aaPredicted RBP13.45□□□□□ -0.26
ATF3-209ENST00000492118 SIRT2Q8IXJ6 389 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 ZNF652Q9Y2D9 606 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 PNMA6EA0A0J9YXQ4 647 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 SLC15A2Q16348 729 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 EPHA10Q5JZY3 1008 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 CCDC191Q8NCU4 936 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 BICC1Q9H694 974 aaKnown RBP13.45□□□□□ -0.26
ATF3-209ENST00000492118 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
ATF3-209ENST00000492118 PNPLA7Q6ZV29 1317 aa13.44□□□□□ -0.26
ATF3-209ENST00000492118 HCLS1P14317 486 aaPredicted RBP13.44□□□□□ -0.26
ATF3-209ENST00000492118 SSFA2P28290 1259 aa13.44□□□□□ -0.26
ATF3-209ENST00000492118 GTF2E1P29083 439 aaPredicted RBP13.44□□□□□ -0.26
ATF3-209ENST00000492118 ZNF34Q8IZ26 560 aa13.44□□□□□ -0.26
ATF3-209ENST00000492118 C4AP0C0L4 1744 aa13.44□□□□□ -0.26
ATF3-209ENST00000492118 UTRNP46939 3433 aa13.44□□□□□ -0.26
ATF3-209ENST00000492118 HSP90AB3PQ58FF7 597 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 CEP85Q6P2H3 762 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 SETDB2Q96T68 719 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
ATF3-209ENST00000492118 GYS1P13807 737 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 KLHDC4Q8TBB5 520 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 KAZALD1Q96I82 304 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 TUBGCP6Q96RT7 1819 aa13.43□□□□□ -0.26
ATF3-209ENST00000492118 SRGAP3O43295 1099 aa13.42□□□□□ -0.26
ATF3-209ENST00000492118 PPP1R42Q7Z4L9 355 aa13.42□□□□□ -0.26
ATF3-209ENST00000492118 NFIXQ14938 502 aa13.42□□□□□ -0.26
ATF3-209ENST00000492118 NBPF5PQ86XG9 351 aaPredicted RBP13.42□□□□□ -0.26
ATF3-209ENST00000492118 UTP14AQ9BVJ6 771 aaKnown RBP13.42□□□□□ -0.26
ATF3-209ENST00000492118 PSDA5PKW4 1024 aaPredicted RBP13.41□□□□□ -0.26
ATF3-209ENST00000492118 H7C1W4 665 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 IRS4O14654 1257 aaPredicted RBP13.41□□□□□ -0.26
ATF3-209ENST00000492118 ADRA2BP18089 450 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 ERFEQ4G0M1 354 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 LMBR1LQ6UX01 489 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 CLEC4GQ6UXB4 293 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 CCDC125Q86Z20 511 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 ZBTB38Q8NAP3 1195 aaPredicted RBP13.41□□□□□ -0.26
ATF3-209ENST00000492118 SIL1Q9H173 461 aa13.41□□□□□ -0.26
ATF3-209ENST00000492118 N4BP2Q86UW6 1770 aaPredicted RBP13.41□□□□□ -0.26
ATF3-209ENST00000492118 R3HDM1Q15032 1099 aaKnown RBP13.4□□□□□ -0.26
ATF3-209ENST00000492118 RWDD1Q9H446 243 aaPredicted RBP13.4□□□□□ -0.26
ATF3-209ENST00000492118 PA2G4Q9UQ80 394 aaKnown RBP13.4□□□□□ -0.26
ATF3-209ENST00000492118 EXOC6BQ9Y2D4 811 aa13.4□□□□□ -0.26
ATF3-209ENST00000492118 ANKRD36CQ5JPF3 1778 aa13.4□□□□□ -0.26
ATF3-209ENST00000492118 CASP7P55210 303 aa13.4□□□□□ -0.26
ATF3-209ENST00000492118 ANKRD44Q8N8A2 993 aa13.4□□□□□ -0.26
ATF3-209ENST00000492118 BCORQ6W2J9 1755 aa13.4□□□□□ -0.27
ATF3-209ENST00000492118 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
ATF3-209ENST00000492118 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
ATF3-209ENST00000492118 NTSR2O95665 410 aa13.39□□□□□ -0.27
ATF3-209ENST00000492118 SH3TC1Q8TE82 1336 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 ZBTB22O15209 634 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 FOXO4P98177 505 aa13.38□□□□□ -0.27
ATF3-209ENST00000492118 ATP8B2P98198 1209 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms