RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CALD1Q05682 793 aaKnown RBP11.42□□□□□ -0.58
NUP50-217ENST00000491860 TTLL7Q6ZT98 887 aa11.42□□□□□ -0.58
NUP50-217ENST00000491860 ZNF34Q8IZ26 560 aa11.42□□□□□ -0.58
NUP50-217ENST00000491860 PSMD1Q99460 953 aa11.42□□□□□ -0.58
NUP50-217ENST00000491860 ZBTB3Q9H5J0 574 aa11.42□□□□□ -0.58
NUP50-217ENST00000491860 CHL1O00533 1208 aa11.41□□□□□ -0.58
NUP50-217ENST00000491860 SLC34A2O95436 690 aa11.41□□□□□ -0.58
NUP50-217ENST00000491860 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
NUP50-217ENST00000491860 HOXA10P31260 410 aaPredicted RBP11.41□□□□□ -0.58
NUP50-217ENST00000491860 L3MBTL3Q96JM7 780 aaPredicted RBP11.41□□□□□ -0.58
NUP50-217ENST00000491860 NLRP3Q96P20 1036 aa11.41□□□□□ -0.58
NUP50-217ENST00000491860 CRAMP1Q96RY5 1269 aa11.41□□□□□ -0.58
NUP50-217ENST00000491860 VPS33BQ9H267 617 aa11.41□□□□□ -0.58
NUP50-217ENST00000491860 PRKRIP1Q9H875 184 aaPredicted RBP11.41□□□□□ -0.58
NUP50-217ENST00000491860 DDX21Q9NR30 783 aaKnown RBP eCLIP11.41□□□□□ -0.58
NUP50-217ENST00000491860 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
NUP50-217ENST00000491860 GPTP24298 496 aa11.4□□□□□ -0.58
NUP50-217ENST00000491860 CTCFP49711 727 aaPredicted RBP11.4□□□□□ -0.58
NUP50-217ENST00000491860 PDIA6Q15084 440 aa11.4□□□□□ -0.58
NUP50-217ENST00000491860 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
NUP50-217ENST00000491860 JDP2Q8WYK2 163 aa11.4□□□□□ -0.58
NUP50-217ENST00000491860 UTP14AQ9BVJ6 771 aaKnown RBP11.4□□□□□ -0.58
NUP50-217ENST00000491860 ANKRD36CQ5JPF3 1778 aa11.4□□□□□ -0.58
NUP50-217ENST00000491860 UBN2Q6ZU65 1347 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 ADAMTSL1Q8N6G6 1762 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 NTSR2O95665 410 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 IARSP41252 1262 aaKnown RBP11.39□□□□□ -0.59
NUP50-217ENST00000491860 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 SLC10A5Q5PT55 438 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 SUSD4Q5VX71 490 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 NUTM1Q86Y26 1132 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 CCDC146Q8IYE0 955 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 CFAP44Q96MT7 982 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 DBF4Q9UBU7 674 aaPredicted RBP11.39□□□□□ -0.59
NUP50-217ENST00000491860 ABCC12Q96J65 1359 aa11.39□□□□□ -0.59
NUP50-217ENST00000491860 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
NUP50-217ENST00000491860 LRP10Q7Z4F1 713 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 PNMA8AQ86V59 439 aaPredicted RBP11.38□□□□□ -0.59
NUP50-217ENST00000491860 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 AIDAQ96BJ3 306 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 WBP1LQ9NX94 342 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 ADAMTS8Q9UP79 889 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 TRIM35Q9UPQ4 493 aa11.38□□□□□ -0.59
NUP50-217ENST00000491860 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 FZD9O00144 591 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 PPEF1O14829 653 aaPredicted RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 BBOX1O75936 387 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 ITGBL1O95965 494 aaPredicted RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 HSP90B1P14625 803 aaKnown RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 ZEB1P37275 1124 aaPredicted RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 VEGFBP49765 207 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 EIF6P56537 245 aaKnown RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 GNAI1P63096 354 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 TCIRG1Q13488 830 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 HDGFL1Q5TGJ6 251 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 TMC4Q7Z404 712 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 GPC2Q8N158 579 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 TAF1DQ9H5J8 278 aaPredicted RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 ZNF277Q9NRM2 450 aaPredicted RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 HYPKQ9NX55 129 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
NUP50-217ENST00000491860 LAS1LQ9Y4W2 734 aaKnown RBP11.37□□□□□ -0.59
NUP50-217ENST00000491860 SH3TC1Q8TE82 1336 aa11.36□□□□□ -0.59
NUP50-217ENST00000491860 NLRP10Q86W26 655 aa11.36□□□□□ -0.59
NUP50-217ENST00000491860 PLBD2Q8NHP8 589 aa11.36□□□□□ -0.59
NUP50-217ENST00000491860 XAGE3Q8WTP9 111 aa11.36□□□□□ -0.59
NUP50-217ENST00000491860 IFT57Q9NWB7 429 aa11.36□□□□□ -0.59
NUP50-217ENST00000491860 SNED1Q8TER0 1413 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 RASSF10A6NK89 507 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
NUP50-217ENST00000491860 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
NUP50-217ENST00000491860 PROSER3Q2NL68 480 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
NUP50-217ENST00000491860 TRMT112Q9UI30 125 aaKnown RBP11.35□□□□□ -0.59
NUP50-217ENST00000491860 ATP6V0A2Q9Y487 856 aa11.35□□□□□ -0.59
NUP50-217ENST00000491860 DUSP27Q5VZP5 1158 aa11.34□□□□□ -0.59
NUP50-217ENST00000491860 NIM1KQ8IY84 436 aa11.34□□□□□ -0.59
NUP50-217ENST00000491860 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
NUP50-217ENST00000491860 CHPF2Q9P2E5 772 aa11.34□□□□□ -0.59
NUP50-217ENST00000491860 ANXA1P04083 346 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
NUP50-217ENST00000491860 EPHX2P34913 555 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 LBX1P52954 281 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 TRIM28Q13263 835 aaKnown RBP11.33□□□□□ -0.6
NUP50-217ENST00000491860 SP8Q8IXZ3 490 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 NECTIN2Q92692 538 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 MBIPQ9NS73 344 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
NUP50-217ENST00000491860 LAMB2P55268 1798 aa11.32□□□□□ -0.6
NUP50-217ENST00000491860 APAF1O14727 1248 aa11.32□□□□□ -0.6
NUP50-217ENST00000491860 DDX58O95786 925 aaKnown RBP11.32□□□□□ -0.6
NUP50-217ENST00000491860 ZNF853P0CG23 659 aa11.32□□□□□ -0.6
NUP50-217ENST00000491860 MAP2K1Q02750 393 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms