RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 CEBPZQ03701 1054 aaKnown RBP12.77□□□□□ -0.36
SNED1-211ENST00000491761 TOM1L2Q6ZVM7 507 aa12.77□□□□□ -0.36
SNED1-211ENST00000491761 RASSF8Q8NHQ8 419 aa12.77□□□□□ -0.36
SNED1-211ENST00000491761 TMEM63CQ9P1W3 806 aa12.77□□□□□ -0.36
SNED1-211ENST00000491761 ZSCAN22P10073 491 aaPredicted RBP12.77□□□□□ -0.36
SNED1-211ENST00000491761 TPM4P67936 248 aa12.77□□□□□ -0.36
SNED1-211ENST00000491761 CLSTN1O94985 981 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNED1-211ENST00000491761 CEMIPQ8WUJ3 1361 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 SKIDA1Q1XH10 827 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 ARHGEF25Q86VW2 580 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 BOLA2Q9H3K6 86 aa12.77□□□□□ -0.37
SNED1-211ENST00000491761 RRP9O43818 475 aaKnown RBP12.76□□□□□ -0.37
SNED1-211ENST00000491761 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 HS1BP3Q53T59 392 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 LSG1Q9H089 658 aaKnown RBP12.76□□□□□ -0.37
SNED1-211ENST00000491761 UQCRHLA0A096LP55 91 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 UQCRHP07919 91 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 PDCP20941 246 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 ANKRD1Q15327 319 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 MYD88Q99836 296 aa12.76□□□□□ -0.37
SNED1-211ENST00000491761 DCAF8L1A6NGE4 600 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 TPM2P07951 284 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 BLOC1S2Q6QNY1 142 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 TRIM5Q9C035 493 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 CCDC183Q5T5S1 534 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 RIMS1Q86UR5 1692 aaKnown RBP12.75□□□□□ -0.37
SNED1-211ENST00000491761 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 RGPD1P0DJD0 1748 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
SNED1-211ENST00000491761 GJB2P29033 226 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 PROSER3Q2NL68 480 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 BICC1Q9H694 974 aaKnown RBP12.74□□□□□ -0.37
SNED1-211ENST00000491761 ADGRL3Q9HAR2 1447 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 PDIA4P13667 645 aaKnown RBP12.74□□□□□ -0.37
SNED1-211ENST00000491761 MTX1Q13505 466 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 VPS53Q5VIR6 699 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
SNED1-211ENST00000491761 NOC3LQ8WTT2 800 aaKnown RBP12.74□□□□□ -0.37
SNED1-211ENST00000491761 SUCLG2Q96I99 432 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 RBM8AQ9Y5S9 174 aaKnown RBP12.74□□□□□ -0.37
SNED1-211ENST00000491761 XAGE3Q8WTP9 111 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 CNPY2Q9Y2B0 182 aa12.74□□□□□ -0.37
SNED1-211ENST00000491761 CPA1P15085 419 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 SYT1P21579 422 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 RASEFQ8IZ41 740 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 F13A1P00488 732 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 UBE2HP62256 183 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 STK11IPQ8N1F8 1099 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 CCDC171Q6TFL3 1326 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
SNED1-211ENST00000491761 SASS6Q6UVJ0 657 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 COPS6Q7L5N1 327 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 ADCY9O60503 1353 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 CABP4P57796 275 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 IFNL2Q8IZJ0 200 aa12.73□□□□□ -0.37
SNED1-211ENST00000491761 PIK3C2AO00443 1686 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 ZNF790Q6PG37 636 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 CCDC34Q96HJ3 373 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 ERBB4Q15303 1308 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 FMN2Q9NZ56 1722 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 ANKRD13DQ6ZTN6 518 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 RUFY3Q7L099 469 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 DNAJC2Q99543 621 aaKnown RBP12.72□□□□□ -0.37
SNED1-211ENST00000491761 KIF13AQ9H1H9 1805 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 KRT85P78386 507 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 CREB3L3Q68CJ9 461 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 TM6SF1Q9BZW5 370 aa12.72□□□□□ -0.37
SNED1-211ENST00000491761 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
SNED1-211ENST00000491761 GADD45BO75293 160 aaPredicted RBP12.71□□□□□ -0.37
SNED1-211ENST00000491761 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
SNED1-211ENST00000491761 MCM5P33992 734 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 PTH1RQ03431 593 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 IL25Q9H293 177 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 KRT32Q14532 448 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 TTLL5Q6EMB2 1281 aa12.71□□□□□ -0.37
SNED1-211ENST00000491761 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.38
SNED1-211ENST00000491761 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.38
SNED1-211ENST00000491761 SDF4Q9BRK5 362 aa12.71□□□□□ -0.38
SNED1-211ENST00000491761 SETD1BQ9UPS6 1966 aaKnown RBP12.7□□□□□ -0.38
SNED1-211ENST00000491761 TPM3P06753 285 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 NEUROD6Q96NK8 337 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 USP42Q9H9J4 1324 aaKnown RBP12.7□□□□□ -0.38
SNED1-211ENST00000491761 UVSSAQ2YD98 709 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 EAF2Q96CJ1 260 aaPredicted RBP12.7□□□□□ -0.38
SNED1-211ENST00000491761 DNAJC5Q9H3Z4 198 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 NOL7Q9UMY1 257 aaKnown RBP12.7□□□□□ -0.38
SNED1-211ENST00000491761 TOM1O60784 492 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 SLC52A2Q9HAB3 445 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 ZHX1Q9UKY1 873 aaPredicted RBP12.7□□□□□ -0.38
SNED1-211ENST00000491761 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
SNED1-211ENST00000491761 APPP05067 770 aa12.69□□□□□ -0.38
SNED1-211ENST00000491761 STK3Q13188 491 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms