RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 COPS6Q7L5N1 327 aa17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 LRP10Q7Z4F1 713 aa17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 SMC1BQ8NDV3 1235 aa17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 RBM17Q96I25 401 aaKnown RBP17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 UTP14AQ9BVJ6 771 aaKnown RBP17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 CHMP4AQ9BY43 222 aa17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 DBF4Q9UBU7 674 aaPredicted RBP17.5■□□□□ 0.39
SPTAN1-208ENST00000491712 APAF1O14727 1248 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 NTSR2O95665 410 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 ANXA1P04083 346 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 GNAI1P63096 354 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 XAGE3Q8WTP9 111 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 NLRP3Q96P20 1036 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 IFT57Q9NWB7 429 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 WDR90Q96KV7 1748 aa17.49■□□□□ 0.39
SPTAN1-208ENST00000491712 CHPF2Q9P2E5 772 aa17.48■□□□□ 0.39
SPTAN1-208ENST00000491712 HOXA10P31260 410 aaPredicted RBP17.47■□□□□ 0.39
SPTAN1-208ENST00000491712 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
SPTAN1-208ENST00000491712 MBIPQ9NS73 344 aa17.47■□□□□ 0.39
SPTAN1-208ENST00000491712 HYPKQ9NX55 129 aa17.47■□□□□ 0.39
SPTAN1-208ENST00000491712 ANP32CO43423 234 aa17.46■□□□□ 0.39
SPTAN1-208ENST00000491712 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
SPTAN1-208ENST00000491712 CRAMP1Q96RY5 1269 aa17.46■□□□□ 0.39
SPTAN1-208ENST00000491712 IQCA1LA6NCM1 817 aa17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 ZNF316A6NFI3 1004 aaPredicted RBP17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 TCIRG1Q13488 830 aa17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 PLBD2Q8NHP8 589 aa17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 PSMD1Q99460 953 aa17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 SH3TC1Q8TE82 1336 aa17.45■□□□□ 0.38
SPTAN1-208ENST00000491712 PPEF1O14829 653 aaPredicted RBP17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 IARSP41252 1262 aaKnown RBP17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 NLRP10Q86W26 655 aa17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 TRMT112Q9UI30 125 aaKnown RBP17.44■□□□□ 0.38
SPTAN1-208ENST00000491712 SLC10A5Q5PT55 438 aa17.43■□□□□ 0.38
SPTAN1-208ENST00000491712 GOLGA2Q08379 1002 aa17.42■□□□□ 0.38
SPTAN1-208ENST00000491712 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
SPTAN1-208ENST00000491712 SYNE4Q8N205 404 aa17.42■□□□□ 0.38
SPTAN1-208ENST00000491712 SCN4AP35499 1836 aa17.42■□□□□ 0.38
SPTAN1-208ENST00000491712 DDNO94850 711 aaPredicted RBP17.41■□□□□ 0.38
SPTAN1-208ENST00000491712 MRS2Q9HD23 443 aa17.41■□□□□ 0.38
SPTAN1-208ENST00000491712 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
SPTAN1-208ENST00000491712 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
SPTAN1-208ENST00000491712 DDX46Q7L014 1031 aaKnown RBP17.4■□□□□ 0.38
SPTAN1-208ENST00000491712 L3MBTL3Q96JM7 780 aaPredicted RBP17.4■□□□□ 0.38
SPTAN1-208ENST00000491712 LAMB2P55268 1798 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 BBOX1O75936 387 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 CCDC30Q5VVM6 783 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 RIC3Q7Z5B4 369 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 SUPT20HQ8NEM7 779 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 ABCC4O15439 1325 aa17.39■□□□□ 0.37
SPTAN1-208ENST00000491712 SNED1Q8TER0 1413 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 POTECB2RU33 542 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 TCERG1O14776 1098 aaKnown RBP17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 DDX58O95786 925 aaKnown RBP17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 GPC2Q8N158 579 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 LARGE2Q8N3Y3 721 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
SPTAN1-208ENST00000491712 FZD9O00144 591 aa17.37■□□□□ 0.37
SPTAN1-208ENST00000491712 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
SPTAN1-208ENST00000491712 CHADLQ6NUI6 762 aa17.37■□□□□ 0.37
SPTAN1-208ENST00000491712 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
SPTAN1-208ENST00000491712 HACL1Q9UJ83 578 aa17.37■□□□□ 0.37
SPTAN1-208ENST00000491712 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 GRAPQ13588 217 aa17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 GRAPLQ8TC17 118 aaPredicted RBP17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 STK31Q9BXU1 1019 aa17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
SPTAN1-208ENST00000491712 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 PPIP5K2O43314 1243 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 CCDC184Q52MB2 194 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 DPP8Q6V1X1 898 aaPredicted RBP17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 IL16Q14005 1332 aa17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 DDX60Q8IY21 1712 aaKnown RBP17.35■□□□□ 0.37
SPTAN1-208ENST00000491712 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 DNAJC5GQ8N7S2 189 aa17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 C8orf58Q8NAV2 365 aa17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 KLRG1Q96E93 195 aa17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 FAM89AQ96GI7 184 aa17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
SPTAN1-208ENST00000491712 EAPPQ56P03 285 aaPredicted RBP17.33■□□□□ 0.36
SPTAN1-208ENST00000491712 MPNDQ8N594 471 aa17.33■□□□□ 0.36
SPTAN1-208ENST00000491712 PHAXQ9H814 394 aaKnown RBP17.33■□□□□ 0.36
SPTAN1-208ENST00000491712 GJA3Q9Y6H8 435 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 408.7 ms