RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 ZNF526Q8TF50 670 aaPredicted RBP22.63■■□□□ 1.21
SMARCD3-214ENST00000491651 UTP14AQ9BVJ6 771 aaKnown RBP22.63■■□□□ 1.21
SMARCD3-214ENST00000491651 DDX60Q8IY21 1712 aaKnown RBP22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 ELL2O00472 640 aaPredicted RBP22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 LMNB1P20700 586 aa22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 CRY2Q49AN0 593 aa22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 CCDC30Q5VVM6 783 aa22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 TSR2Q969E8 191 aaKnown RBP22.62■■□□□ 1.21
SMARCD3-214ENST00000491651 ALDH1B1P30837 517 aa22.61■■□□□ 1.21
SMARCD3-214ENST00000491651 WDR63Q8IWG1 891 aa22.61■■□□□ 1.21
SMARCD3-214ENST00000491651 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
SMARCD3-214ENST00000491651 LTBP3Q9NS15 1303 aa22.6■■□□□ 1.21
SMARCD3-214ENST00000491651 NFKBIEO00221 500 aa22.6■■□□□ 1.21
SMARCD3-214ENST00000491651 RPGRQ92834 1020 aaKnown RBP22.6■■□□□ 1.21
SMARCD3-214ENST00000491651 GOLGA2Q08379 1002 aa22.59■■□□□ 1.21
SMARCD3-214ENST00000491651 CCDC93Q567U6 631 aa22.59■■□□□ 1.21
SMARCD3-214ENST00000491651 NLRP10Q86W26 655 aa22.59■■□□□ 1.21
SMARCD3-214ENST00000491651 TAOK3Q9H2K8 898 aa22.59■■□□□ 1.21
SMARCD3-214ENST00000491651 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
SMARCD3-214ENST00000491651 SALL2Q9Y467 1007 aaPredicted RBP22.58■■□□□ 1.21
SMARCD3-214ENST00000491651 C1QTNF8P60827 252 aa22.57■■□□□ 1.2
SMARCD3-214ENST00000491651 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
SMARCD3-214ENST00000491651 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
SMARCD3-214ENST00000491651 SH3TC1Q8TE82 1336 aa22.57■■□□□ 1.2
SMARCD3-214ENST00000491651 FANCIQ9NVI1 1328 aa22.57■■□□□ 1.2
SMARCD3-214ENST00000491651 TWISTNBQ3B726 338 aaPredicted RBP22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 SLC10A5Q5PT55 438 aa22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 RIC3Q7Z5B4 369 aa22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 C7orf43Q8WVR3 580 aa22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 STK31Q9BXU1 1019 aa22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 TRMT112Q9UI30 125 aaKnown RBP22.56■■□□□ 1.2
SMARCD3-214ENST00000491651 MYH3P11055 1940 aa22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 DDX58O95786 925 aaKnown RBP22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 HOXA10P31260 410 aaPredicted RBP22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 RBM17Q96I25 401 aaKnown RBP22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 ISCA1Q9BUE6 129 aa22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 PHAXQ9H814 394 aaKnown RBP22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 TAF1P21675 1872 aa22.55■■□□□ 1.2
SMARCD3-214ENST00000491651 PRELPP51888 382 aa22.54■■□□□ 1.2
SMARCD3-214ENST00000491651 CRAMP1Q96RY5 1269 aa22.53■■□□□ 1.2
SMARCD3-214ENST00000491651 TRIM28Q13263 835 aaKnown RBP22.52■■□□□ 1.2
SMARCD3-214ENST00000491651 CC2D2BQ6DHV5 1058 aa22.52■■□□□ 1.2
SMARCD3-214ENST00000491651 RTKN2Q8IZC4 609 aa22.52■■□□□ 1.2
SMARCD3-214ENST00000491651 ATP5J2-PTCD1G3V325 749 aa22.51■■□□□ 1.19
SMARCD3-214ENST00000491651 KIF3CO14782 793 aa22.51■■□□□ 1.19
SMARCD3-214ENST00000491651 FKBP4Q02790 459 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMARCD3-214ENST00000491651 C3orf67Q6ZVT6 689 aa22.51■■□□□ 1.19
SMARCD3-214ENST00000491651 MYH16Q9H6N6 1097 aa22.51■■□□□ 1.19
SMARCD3-214ENST00000491651 WDR90Q96KV7 1748 aa22.5■■□□□ 1.19
SMARCD3-214ENST00000491651 SNED1Q8TER0 1413 aa22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 CCER2I3L3R5 266 aa22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 PPEF1O14829 653 aaPredicted RBP22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 HCLS1P14317 486 aaPredicted RBP22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 GRIPAP1Q4V328 841 aa22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 NMRK2Q9NPI5 230 aa22.49■■□□□ 1.19
SMARCD3-214ENST00000491651 LRRC37AA6NMS7 1700 aa22.48■■□□□ 1.19
SMARCD3-214ENST00000491651 GLTPD2A6NH11 291 aa22.48■■□□□ 1.19
SMARCD3-214ENST00000491651 MYD88Q99836 296 aa22.48■■□□□ 1.19
SMARCD3-214ENST00000491651 SYNE4Q8N205 404 aa22.47■■□□□ 1.19
SMARCD3-214ENST00000491651 CCDC191Q8NCU4 936 aa22.47■■□□□ 1.19
SMARCD3-214ENST00000491651 METTL22Q9BUU2 404 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-214ENST00000491651 TMX4Q9H1E5 349 aaPredicted RBP22.47■■□□□ 1.19
SMARCD3-214ENST00000491651 ABCC4O15439 1325 aa22.47■■□□□ 1.19
SMARCD3-214ENST00000491651 SCN4AP35499 1836 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 HSP90B1P14625 803 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 DPY19L2Q6NUT2 758 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 OLFM4Q6UX06 510 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 KSR2Q6VAB6 950 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 DDX46Q7L014 1031 aaKnown RBP22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 PSMD1Q99460 953 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 ZNF521Q96K83 1311 aa22.46■■□□□ 1.19
SMARCD3-214ENST00000491651 TCERG1O14776 1098 aaKnown RBP22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 SLC4A2P04920 1241 aa22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 C16orf71Q8IYS4 520 aaPredicted RBP22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 ZBTB38Q8NAP3 1195 aaPredicted RBP22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 FAM89AQ96GI7 184 aa22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 SPINK5Q9NQ38 1064 aaPredicted RBP22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 MAP3K2Q9Y2U5 619 aa22.45■■□□□ 1.18
SMARCD3-214ENST00000491651 PI4KAP2A4QPH2 592 aa22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 VAMP4O75379 141 aa22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 NEXNQ0ZGT2 675 aa22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 PI4KAP1Q8N8J0 262 aa22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 ZNF428Q96B54 188 aa22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 ZNF277Q9NRM2 450 aaPredicted RBP22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 CWC25Q9NXE8 425 aaPredicted RBP22.44■■□□□ 1.18
SMARCD3-214ENST00000491651 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
SMARCD3-214ENST00000491651 TOMM70O94826 608 aa22.43■■□□□ 1.18
SMARCD3-214ENST00000491651 GRAPQ13588 217 aa22.43■■□□□ 1.18
SMARCD3-214ENST00000491651 GRAPLQ8TC17 118 aaPredicted RBP22.43■■□□□ 1.18
SMARCD3-214ENST00000491651 BBOX1O75936 387 aa22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 PCCAP05165 728 aaPredicted RBP22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 IARSP41252 1262 aaKnown RBP22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 FLIIQ13045 1269 aa22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 SF3B3Q15393 1217 aaKnown RBP22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 TMC4Q7Z404 712 aa22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 RRAGCQ9HB90 399 aa22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 ATP6V0A2Q9Y487 856 aa22.42■■□□□ 1.18
SMARCD3-214ENST00000491651 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms