RNA–Protein interactions for RNA: ENST00000491472.2

EBF4-208, Transcript of early B cell factor 4, human

TSL 5

Gene EBF4, Length 665 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EBF4-208	ENST00000491472	TAOK3	Q9H2K8	898 aa		29.39	■■■□□ 2.3
EBF4-208	ENST00000491472	ABCC12	Q96J65	1359 aa		29.39	■■■□□ 2.29
EBF4-208	ENST00000491472	HOXA10	P31260	410 aa	Predicted RBP	29.38	■■■□□ 2.29
EBF4-208	ENST00000491472	CCDC93	Q567U6	631 aa		29.38	■■■□□ 2.29
EBF4-208	ENST00000491472	SLC10A5	Q5PT55	438 aa		29.38	■■■□□ 2.29
EBF4-208	ENST00000491472	PLBD2	Q8NHP8	589 aa		29.38	■■■□□ 2.29
EBF4-208	ENST00000491472	PRELP	P51888	382 aa		29.37	■■■□□ 2.29
EBF4-208	ENST00000491472	ANKRD13D	Q6ZTN6	518 aa		29.37	■■■□□ 2.29
EBF4-208	ENST00000491472	RPGR	Q92834	1020 aa	Known RBP	29.37	■■■□□ 2.29
EBF4-208	ENST00000491472	DICER1	Q9UPY3	1922 aa	Known RBP	29.37	■■■□□ 2.29
EBF4-208	ENST00000491472	TNRC6C	Q9HCJ0	1690 aa	Known RBP	29.37	■■■□□ 2.29
EBF4-208	ENST00000491472	WWC1	Q8IX03	1113 aa		29.36	■■■□□ 2.29
EBF4-208	ENST00000491472	RTKN2	Q8IZC4	609 aa		29.36	■■■□□ 2.29
EBF4-208	ENST00000491472	TOMM70	O94826	608 aa		29.35	■■■□□ 2.29
EBF4-208	ENST00000491472	NLRP10	Q86W26	655 aa		29.35	■■■□□ 2.29
EBF4-208	ENST00000491472	NLRP3	Q96P20	1036 aa		29.35	■■■□□ 2.29
EBF4-208	ENST00000491472	NMRK2	Q9NPI5	230 aa		29.35	■■■□□ 2.29
EBF4-208	ENST00000491472	IL16	Q14005	1332 aa		29.35	■■■□□ 2.29
EBF4-208	ENST00000491472	SENP3-EIF4A1	A0A087X0R7	540 aa		29.34	■■■□□ 2.29
EBF4-208	ENST00000491472	CC2D2B	Q6DHV5	1058 aa		29.34	■■■□□ 2.29
EBF4-208	ENST00000491472	RBM17	Q96I25	401 aa	Known RBP	29.34	■■■□□ 2.29
EBF4-208	ENST00000491472	TIAM2	Q8IVF5	1701 aa		29.34	■■■□□ 2.29
EBF4-208	ENST00000491472	GLTPD2	A6NH11	291 aa		29.33	■■■□□ 2.29
EBF4-208	ENST00000491472	GRIPAP1	Q4V328	841 aa		29.33	■■■□□ 2.29
EBF4-208	ENST00000491472	CRAMP1	Q96RY5	1269 aa		29.33	■■■□□ 2.29
EBF4-208	ENST00000491472	DPY19L2	Q6NUT2	758 aa		29.32	■■■□□ 2.28
EBF4-208	ENST00000491472	C8orf58	Q8NAV2	365 aa		29.32	■■■□□ 2.28
EBF4-208	ENST00000491472	ELL2	O00472	640 aa	Predicted RBP	29.31	■■■□□ 2.28
EBF4-208	ENST00000491472	CCDC30	Q5VVM6	783 aa		29.31	■■■□□ 2.28
EBF4-208	ENST00000491472	FKBP4	Q02790	459 aa	Known RBP eCLIP	29.3	■■■□□ 2.28
EBF4-208	ENST00000491472	C16orf71	Q8IYS4	520 aa	Predicted RBP	29.3	■■■□□ 2.28
EBF4-208	ENST00000491472	TRMT112	Q9UI30	125 aa	Known RBP	29.3	■■■□□ 2.28
EBF4-208	ENST00000491472	SH3TC1	Q8TE82	1336 aa		29.28	■■■□□ 2.28
EBF4-208	ENST00000491472	GOLGA2	Q08379	1002 aa		29.28	■■■□□ 2.28
EBF4-208	ENST00000491472	TRIM28	Q13263	835 aa	Known RBP	29.28	■■■□□ 2.28
EBF4-208	ENST00000491472	ISCA1	Q9BUE6	129 aa		29.28	■■■□□ 2.28
EBF4-208	ENST00000491472	RRAGC	Q9HB90	399 aa		29.28	■■■□□ 2.28
EBF4-208	ENST00000491472	WDR63	Q8IWG1	891 aa		29.27	■■■□□ 2.28
EBF4-208	ENST00000491472	RBM46	Q8TBY0	533 aa	Known RBP	29.27	■■■□□ 2.28
EBF4-208	ENST00000491472	VEGFA	P15692	232 aa	Predicted RBP	29.25	■■■□□ 2.27
EBF4-208	ENST00000491472	HSPA6	P17066	643 aa		29.25	■■■□□ 2.27
EBF4-208	ENST00000491472	RIC3	Q7Z5B4	369 aa		29.25	■■■□□ 2.27
EBF4-208	ENST00000491472	PSMD1	Q99460	953 aa		29.25	■■■□□ 2.27
EBF4-208	ENST00000491472	DDX58	O95786	925 aa	Known RBP	29.24	■■■□□ 2.27
EBF4-208	ENST00000491472	TSR2	Q969E8	191 aa	Known RBP	29.24	■■■□□ 2.27
EBF4-208	ENST00000491472	TMX4	Q9H1E5	349 aa	Predicted RBP	29.24	■■■□□ 2.27
EBF4-208	ENST00000491472	C3orf67	Q6ZVT6	689 aa		29.23	■■■□□ 2.27
EBF4-208	ENST00000491472	PHAX	Q9H814	394 aa	Known RBP	29.23	■■■□□ 2.27
EBF4-208	ENST00000491472	PPEF1	O14829	653 aa	Predicted RBP	29.22	■■■□□ 2.27
EBF4-208	ENST00000491472	TSPYL6	Q8N831	410 aa		29.22	■■■□□ 2.27
EBF4-208	ENST00000491472	STK31	Q9BXU1	1019 aa		29.22	■■■□□ 2.27
EBF4-208	ENST00000491472	BBOX1	O75936	387 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	HCLS1	P14317	486 aa	Predicted RBP	29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	FSTL1	Q12841	308 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	TWISTNB	Q3B726	338 aa	Predicted RBP	29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	OLFM4	Q6UX06	510 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	FAM9B	Q8IZU0	186 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	SYNE4	Q8N205	404 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	LAMB2	P55268	1798 aa		29.21	■■■□□ 2.27
EBF4-208	ENST00000491472	SNED1	Q8TER0	1413 aa		29.2	■■■□□ 2.27
EBF4-208	ENST00000491472	WDR90	Q96KV7	1748 aa		29.2	■■■□□ 2.27
EBF4-208	ENST00000491472	ATP5J2-PTCD1	G3V325	749 aa		29.2	■■■□□ 2.26
EBF4-208	ENST00000491472	HSP90B1	P14625	803 aa	Known RBP	29.2	■■■□□ 2.26
EBF4-208	ENST00000491472	DDX46	Q7L014	1031 aa	Known RBP	29.2	■■■□□ 2.26
EBF4-208	ENST00000491472	IARS	P41252	1262 aa	Known RBP	29.19	■■■□□ 2.26
EBF4-208	ENST00000491472	ZNF277	Q9NRM2	450 aa	Predicted RBP	29.19	■■■□□ 2.26
EBF4-208	ENST00000491472	ATP6V0A2	Q9Y487	856 aa		29.19	■■■□□ 2.26
EBF4-208	ENST00000491472	ABCC4	O15439	1325 aa		29.18	■■■□□ 2.26
EBF4-208	ENST00000491472	CCDC191	Q8NCU4	936 aa		29.17	■■■□□ 2.26
EBF4-208	ENST00000491472	TMC4	Q7Z404	712 aa		29.16	■■■□□ 2.26
EBF4-208	ENST00000491472	JDP2	Q8WYK2	163 aa		29.16	■■■□□ 2.26
EBF4-208	ENST00000491472	FAM89A	Q96GI7	184 aa		29.16	■■■□□ 2.26
EBF4-208	ENST00000491472	SALL2	Q9Y467	1007 aa	Predicted RBP	29.16	■■■□□ 2.26
EBF4-208	ENST00000491472	FANCI	Q9NVI1	1328 aa		29.16	■■■□□ 2.26
EBF4-208	ENST00000491472	SF3B3	Q15393	1217 aa	Known RBP	29.15	■■■□□ 2.26
EBF4-208	ENST00000491472	SP8	Q8IXZ3	490 aa		29.15	■■■□□ 2.26
EBF4-208	ENST00000491472	METTL22	Q9BUU2	404 aa	Predicted RBP	29.15	■■■□□ 2.26
EBF4-208	ENST00000491472	VPS33B	Q9H267	617 aa		29.15	■■■□□ 2.26
EBF4-208	ENST00000491472	DDX60	Q8IY21	1712 aa	Known RBP	29.14	■■■□□ 2.26
EBF4-208	ENST00000491472	KSR2	Q6VAB6	950 aa		29.14	■■■□□ 2.26
EBF4-208	ENST00000491472	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	29.14	■■■□□ 2.26
EBF4-208	ENST00000491472	SMC1B	Q8NDV3	1235 aa		29.14	■■■□□ 2.26
EBF4-208	ENST00000491472	MYD88	Q99836	296 aa		29.14	■■■□□ 2.26
EBF4-208	ENST00000491472	CACNA1F	O60840	1977 aa		29.13	■■■□□ 2.25
EBF4-208	ENST00000491472	APLP1	P51693	650 aa		29.13	■■■□□ 2.25
EBF4-208	ENST00000491472	GRAP	Q13588	217 aa		29.13	■■■□□ 2.25
EBF4-208	ENST00000491472	GRAPL	Q8TC17	118 aa	Predicted RBP	29.13	■■■□□ 2.25
EBF4-208	ENST00000491472	POTEC	B2RU33	542 aa		29.12	■■■□□ 2.25
EBF4-208	ENST00000491472	IRS4	O14654	1257 aa	Predicted RBP	29.12	■■■□□ 2.25
EBF4-208	ENST00000491472	SUPT20H	Q8NEM7	779 aa		29.12	■■■□□ 2.25
EBF4-208	ENST00000491472	MYH16	Q9H6N6	1097 aa		29.12	■■■□□ 2.25
EBF4-208	ENST00000491472	CWC25	Q9NXE8	425 aa	Predicted RBP	29.12	■■■□□ 2.25
EBF4-208	ENST00000491472	IQCA1L	A6NCM1	817 aa		29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	FZD9	O00144	591 aa		29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	TCERG1	O14776	1098 aa	Known RBP	29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	DDN	O94850	711 aa	Predicted RBP	29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	L3MBTL3	Q96JM7	780 aa	Predicted RBP	29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	MAP3K2	Q9Y2U5	619 aa		29.11	■■■□□ 2.25
EBF4-208	ENST00000491472	SLC4A2	P04920	1241 aa		29.1	■■■□□ 2.25
EBF4-208	ENST00000491472	NEXN	Q0ZGT2	675 aa		29.1	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms