RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 KIF6Q6ZMV9 814 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 TTLL7Q6ZT98 887 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 LRP10Q7Z4F1 713 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 JDP2Q8WYK2 163 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 VPS33BQ9H267 617 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 PNNQ9H307 717 aaKnown RBP11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 BABAM1Q9NWV8 329 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
APOBEC3F-204ENST00000491387 COL4A5P29400 1685 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 RNF123Q5XPI4 1314 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 FOXN1O15353 648 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 NTSR2O95665 410 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 PARP10Q53GL7 1025 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 SUSD4Q5VX71 490 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 NUTM1Q86Y26 1132 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 CNTROBQ8N137 903 aa11.17□□□□□ -0.62
APOBEC3F-204ENST00000491387 ANKRD36CQ5JPF3 1778 aa11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 CTCFP49711 727 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 PDIA6Q15084 440 aa11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 RPGRQ92834 1020 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 RBM17Q96I25 401 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 RRP7AQ9Y3A4 280 aaKnown RBP11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 LAMB2P55268 1798 aa11.16□□□□□ -0.62
APOBEC3F-204ENST00000491387 CAPN15O75808 1086 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 SCNN1DP51172 638 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 EIF6P56537 245 aaKnown RBP11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 DEFB115Q30KQ5 88 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 MAP1SQ66K74 1059 aaPredicted RBP11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 NGEFQ8N5V2 710 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 ZBTB3Q9H5J0 574 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
APOBEC3F-204ENST00000491387 LTBP1Q14766 1721 aa11.15□□□□□ -0.63
APOBEC3F-204ENST00000491387 MYL6BP14649 208 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 GPTP24298 496 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 THUMPD2Q9BTF0 503 aaKnown RBP11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 TAF1P21675 1872 aa11.14□□□□□ -0.63
APOBEC3F-204ENST00000491387 PPEF1O14829 653 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 LMOD1P29536 600 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 EPS15P42566 896 aa11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 MAP2K1Q02750 393 aaPredicted RBP11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 NLRP3Q96P20 1036 aa11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 UTP14AQ9BVJ6 771 aaKnown RBP11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 THSD7BQ9C0I4 1608 aa11.13□□□□□ -0.63
APOBEC3F-204ENST00000491387 WDR33Q9C0J8 1336 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 MAPK8IP3Q9UPT6 1336 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 BBOX1O75936 387 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 DDX10Q13206 875 aaKnown RBP11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 SUPT20HQ8NEM7 779 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 PGAP2Q9UHJ9 254 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 TSPYL4Q9UJ04 414 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 GJA3Q9Y6H8 435 aa11.12□□□□□ -0.63
APOBEC3F-204ENST00000491387 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 TRPM7Q96QT4 1865 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 HSP90AB3PQ58FF7 597 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 SP8Q8IXZ3 490 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 NIM1KQ8IY84 436 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 GPRC5DQ9NZD1 345 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 ZNRF3Q9ULT6 936 aa11.11□□□□□ -0.63
APOBEC3F-204ENST00000491387 ABCC4O15439 1325 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 PPIP5K2O43314 1243 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 HSPA8P11142 646 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 ECE1P42892 770 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 LBX1P52954 281 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 RIPK4P57078 832 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 CXCL9Q07325 125 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 LMOD3Q0VAK6 560 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 RALBP1Q15311 655 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 PROSER3Q2NL68 480 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 CST9Q5W186 159 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 SLC51AQ86UW1 340 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 TMX4Q9H1E5 349 aaPredicted RBP11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 ABT1Q9ULW3 272 aaKnown RBP11.1□□□□□ -0.63
APOBEC3F-204ENST00000491387 CHL1O00533 1208 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 TMPOP42166 694 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 TCIRG1Q13488 830 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 AOC3Q16853 763 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 TMC4Q7Z404 712 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 ZC3H15Q8WU90 426 aaKnown RBP11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 HHIPL1Q96JK4 782 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 TLL2Q9Y6L7 1015 aa11.09□□□□□ -0.63
APOBEC3F-204ENST00000491387 EIF2S2P20042 333 aaKnown RBP11.08□□□□□ -0.64
APOBEC3F-204ENST00000491387 MAP2K2P36507 400 aa11.08□□□□□ -0.64
APOBEC3F-204ENST00000491387 COPS6Q7L5N1 327 aa11.08□□□□□ -0.64
APOBEC3F-204ENST00000491387 MPNDQ8N594 471 aa11.08□□□□□ -0.64
APOBEC3F-204ENST00000491387 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
APOBEC3F-204ENST00000491387 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms