RNA–Protein interactions for RNA: ENST00000491339.1

GABRE-211, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 2,072 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-211ENST00000491339 CHPF2Q9P2E5 772 aa11.24□□□□□ -0.61
GABRE-211ENST00000491339 DBF4Q9UBU7 674 aaPredicted RBP11.24□□□□□ -0.61
GABRE-211ENST00000491339 ANXA1P04083 346 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 ALDH1B1P30837 517 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
GABRE-211ENST00000491339 KRT24Q2M2I5 525 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 XAGE3Q8WTP9 111 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 NFKBIEO00221 500 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 DUSP27Q5VZP5 1158 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 COPS6Q7L5N1 327 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 LRP10Q7Z4F1 713 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 NUTM1Q86Y26 1132 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 ZNF34Q8IZ26 560 aa11.23□□□□□ -0.61
GABRE-211ENST00000491339 DDX60Q8IY21 1712 aaKnown RBP11.22□□□□□ -0.61
GABRE-211ENST00000491339 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
GABRE-211ENST00000491339 KLRG2A4D1S0 409 aaPredicted RBP11.22□□□□□ -0.61
GABRE-211ENST00000491339 NTSR2O95665 410 aa11.22□□□□□ -0.61
GABRE-211ENST00000491339 ERFEQ4G0M1 354 aa11.22□□□□□ -0.61
GABRE-211ENST00000491339 UTP14AQ9BVJ6 771 aaKnown RBP11.22□□□□□ -0.61
GABRE-211ENST00000491339 HYPKQ9NX55 129 aa11.22□□□□□ -0.61
GABRE-211ENST00000491339 WDR90Q96KV7 1748 aa11.22□□□□□ -0.61
GABRE-211ENST00000491339 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
GABRE-211ENST00000491339 SUSD4Q5VX71 490 aa11.21□□□□□ -0.61
GABRE-211ENST00000491339 KIF3CO14782 793 aa11.21□□□□□ -0.62
GABRE-211ENST00000491339 GOLGA2Q08379 1002 aa11.21□□□□□ -0.62
GABRE-211ENST00000491339 CCDC27Q2M243 656 aa11.21□□□□□ -0.62
GABRE-211ENST00000491339 CRY2Q49AN0 593 aa11.21□□□□□ -0.62
GABRE-211ENST00000491339 CCDC184Q52MB2 194 aa11.21□□□□□ -0.62
GABRE-211ENST00000491339 PLBD2Q8NHP8 589 aa11.2□□□□□ -0.62
GABRE-211ENST00000491339 RBM17Q96I25 401 aaKnown RBP11.2□□□□□ -0.62
GABRE-211ENST00000491339 TMX4Q9H1E5 349 aaPredicted RBP11.2□□□□□ -0.62
GABRE-211ENST00000491339 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
GABRE-211ENST00000491339 TOMM70O94826 608 aa11.2□□□□□ -0.62
GABRE-211ENST00000491339 RTKN2Q8IZC4 609 aa11.2□□□□□ -0.62
GABRE-211ENST00000491339 NLRP3Q96P20 1036 aa11.2□□□□□ -0.62
GABRE-211ENST00000491339 FKBP4Q02790 459 aaKnown RBP eCLIP11.19□□□□□ -0.62
GABRE-211ENST00000491339 TCIRG1Q13488 830 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 CC2D2BQ6DHV5 1058 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 SCN4AP35499 1836 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 IL16Q14005 1332 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 SH3TC1Q8TE82 1336 aa11.19□□□□□ -0.62
GABRE-211ENST00000491339 MYH3P11055 1940 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 GLTPD2A6NH11 291 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 GRIPAP1Q4V328 841 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 CCDC30Q5VVM6 783 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 ANKRD13DQ6ZTN6 518 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 NLRP10Q86W26 655 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 TRMT112Q9UI30 125 aaKnown RBP11.18□□□□□ -0.62
GABRE-211ENST00000491339 LRRC37AA6NMS7 1700 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 PPEF1O14829 653 aaPredicted RBP11.18□□□□□ -0.62
GABRE-211ENST00000491339 DDX58O95786 925 aaKnown RBP11.18□□□□□ -0.62
GABRE-211ENST00000491339 WWC1Q8IX03 1113 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 STK31Q9BXU1 1019 aa11.18□□□□□ -0.62
GABRE-211ENST00000491339 ELL2O00472 640 aaPredicted RBP11.17□□□□□ -0.62
GABRE-211ENST00000491339 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
GABRE-211ENST00000491339 PRELPP51888 382 aa11.17□□□□□ -0.62
GABRE-211ENST00000491339 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
GABRE-211ENST00000491339 RBM46Q8TBY0 533 aaKnown RBP11.17□□□□□ -0.62
GABRE-211ENST00000491339 CRAMP1Q96RY5 1269 aa11.17□□□□□ -0.62
GABRE-211ENST00000491339 HSPA6P17066 643 aa11.16□□□□□ -0.62
GABRE-211ENST00000491339 C7orf43Q8WVR3 580 aa11.16□□□□□ -0.62
GABRE-211ENST00000491339 TSR2Q969E8 191 aaKnown RBP11.16□□□□□ -0.62
GABRE-211ENST00000491339 HSP90B1P14625 803 aaKnown RBP11.16□□□□□ -0.62
GABRE-211ENST00000491339 PSMD1Q99460 953 aa11.16□□□□□ -0.62
GABRE-211ENST00000491339 RRAGCQ9HB90 399 aa11.16□□□□□ -0.62
GABRE-211ENST00000491339 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
GABRE-211ENST00000491339 IARSP41252 1262 aaKnown RBP11.15□□□□□ -0.62
GABRE-211ENST00000491339 SLC10A5Q5PT55 438 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 DIEXFQ68CQ4 756 aaKnown RBP11.15□□□□□ -0.62
GABRE-211ENST00000491339 DDX46Q7L014 1031 aaKnown RBP11.15□□□□□ -0.62
GABRE-211ENST00000491339 FAM9BQ8IZU0 186 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 C8orf58Q8NAV2 365 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 TAF1P21675 1872 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 ABCC4O15439 1325 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 SNED1Q8TER0 1413 aa11.15□□□□□ -0.62
GABRE-211ENST00000491339 FSTL1Q12841 308 aa11.15□□□□□ -0.63
GABRE-211ENST00000491339 TWISTNBQ3B726 338 aaPredicted RBP11.15□□□□□ -0.63
GABRE-211ENST00000491339 SMC1BQ8NDV3 1235 aa11.15□□□□□ -0.63
GABRE-211ENST00000491339 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.63
GABRE-211ENST00000491339 ZNF277Q9NRM2 450 aaPredicted RBP11.15□□□□□ -0.63
GABRE-211ENST00000491339 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
GABRE-211ENST00000491339 HCLS1P14317 486 aaPredicted RBP11.14□□□□□ -0.63
GABRE-211ENST00000491339 WDR63Q8IWG1 891 aa11.14□□□□□ -0.63
GABRE-211ENST00000491339 JDP2Q8WYK2 163 aa11.14□□□□□ -0.63
GABRE-211ENST00000491339 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
GABRE-211ENST00000491339 SPEF2Q9C093 1822 aa11.14□□□□□ -0.63
GABRE-211ENST00000491339 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 APLP1P51693 650 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 OLFM4Q6UX06 510 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 TMC4Q7Z404 712 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 SYNE4Q8N205 404 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 PHAXQ9H814 394 aaKnown RBP11.13□□□□□ -0.63
GABRE-211ENST00000491339 NEXNQ0ZGT2 675 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 GRAPQ13588 217 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 SUPT20HQ8NEM7 779 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 GRAPLQ8TC17 118 aaPredicted RBP11.13□□□□□ -0.63
GABRE-211ENST00000491339 MYD88Q99836 296 aa11.13□□□□□ -0.63
GABRE-211ENST00000491339 MYH16Q9H6N6 1097 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms